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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183602294
OODJ01031319
24650
Bacillota
TAA
Leu
>WENV183602175
OODJ01019479
158247
Bacillota
>WENV183602259
OODJ01026360
144612
Bacillota
TCT
Arg
>WENV183600930
OODJ01000071
235134
Bacillota
GAA
Phe
>WENV183602277
OODJ01028020
156189
Bacillota
GAT
Ile
>WENV183601627
OODJ01002544
235098
Bacillota
GAC
Val
>WENV183601781
OODJ01004417
235098
Bacillota
GAC
Val
>WENV183601811
OODJ01005025
235098
Bacillota
GAC
Val
>WENV183601887
OODJ01006873
338152
Bacillota
TTC
Glu
>WENV183601170
OODJ01000394
340263
Bacillota
TTC
Glu
>WENV183601813
OODJ01005043
44854
Bacillota
TGA
Ser
>WENV183601310
OODJ01000767
44854
Bacillota
TGA
Ser
>WENV183601258
OODJ01000557
44854
Bacillota
TGA
Ser
>WENV183602369
OODJ01045976
235154
Bacillota
GTT
Asn
>WENV183601172
OODJ01000394
148348
Bacillota
GTC
Asp
>WENV183601975
OODJ01010253
37071
Bacillota
TGA
Ser
>WENV183602425
OODJ01058817
429443
Bacillota
GCA
Cys
>WENV183602411
OODJ01055681
246023
Bacillota
TGC
Ala
>WENV183601619
OODJ01002484
239080
Bacillota
CTG
Gln
>WENV183602113
OODJ01016395
338147
Bacillota
CTC
Glu
>WENV183601960
OODJ01008993
338147
Bacillota
CTC
Glu
>WENV183601415
OODJ01001189
340802
Bacillota
TTG
Gln
>WENV183602084
OODJ01014918
429429
Bacillota
CCA
Trp
>WENV183602347
OODJ01039736
41154
Bacillota
TAA
Leu
>WENV183602073
OODJ01014278
44859
Bacillota
AAG
Leu
>WENV183601568
OODJ01002060
11034
Bacillota
GGA
Ser
>WENV183601514
OODJ01001653
11034
Bacillota
GGA
Ser
>WENV183601325
OODJ01000834
11034
Bacillota
GGA
Ser
>WENV183601173
OODJ01000394
239076
Bacillota
GAA
Phe
>WENV183602303
OODJ01032736
295714
Bacillota
GCC
Gly
>WENV183601795
OODJ01004656
340265
Bacillota
GCC
Gly
>WENV183601637
OODJ01002658
245298
Bacillota
CGG
Pro
>WENV183601302
OODJ01000715
245298
Bacillota
CGG
Pro
>WENV183601282
OODJ01000651
245298
Bacillota
CGG
Pro
>WENV183602059
OODJ01013535
37269
Bacillota
TGA
Ser
>WENV183601850
OODJ01005840
287000
Bacillota
GTT
Asn
>WENV183601849
OODJ01005840
287000
Bacillota
GTT
Asn
>WENV183602353
OODJ01042640
169968
Bacillota
CAT
Met
>WENV183600939
OODJ01000076
152149
Bacillota
GTG
His
>WENV183602180
OODJ01019870
162445
Bacillota
CAT
Met
>WENV183602404
OODJ01054472
201704
Bacillota
GAT
Ile
>WENV183602375
OODJ01047352
152492
Bacillota
GGG
Pro
>WENV183601990
OODJ01011026
148268
Bacillota
CGG
Pro
>WENV183601956
OODJ01008883
100326
Bacillota
GTA
Tyr
>WENV183602100
OODJ01015587
144610
Bacillota
GTG
His
>WENV183601414
OODJ01001189
144610
Bacillota
GTG
His
>WENV183600931
OODJ01000071
240017
Bacillota
GCC
Gly
>WENV183601936
OODJ01008249
411547
Bacillota
CTG
Gln
>WENV183601687
OODJ01003173
411547
Bacillota
CTG
Gln
>WENV183601636
OODJ01002658
411547
Bacillota
CTG
Gln
>WENV183601431
OODJ01001270
411547
Bacillota
CTG
Gln
>WENV183601400
OODJ01001105
411547
Bacillota
CTG
Gln
>WENV183601301
OODJ01000715
411547
Bacillota
CTG
Gln
>WENV183601281
OODJ01000651
411547
Bacillota
CTG
Gln
>WENV183601814
OODJ01005043
4624
Bacillota
GCT
Ser
>WENV183601311
OODJ01000767
4624
Bacillota
GCT
Ser
>WENV183601259
OODJ01000557
4624
Bacillota
GCT
Ser
>WENV183600928
OODJ01000071
263765
Bacillota
TAC
Val
>WENV183602207
OODJ01022857
412387
Bacillota
GCA
Cys
>WENV183601074
OODJ01000205
248683
Bacillota
TTT
Lys
>WENV183601982
OODJ01010505
235095
Bacillota
GGT
Thr
>WENV183601726
OODJ01003699
235095
Bacillota
GGT
Thr
>WENV183601341
OODJ01000879
344183
Bacillota
CTG
Gln
>WENV183601641
OODJ01002711
419945
Bacillota
GCA
Cys
>WENV183601041
OODJ01000172
241471
Bacillota
TGC
Ala
>WENV183601363
OODJ01000958
419639
Bacillota
GCA
Cys
>WENV183601171
OODJ01000394
239079
Bacillota
TAC
Val
>WENV183601371
OODJ01000985
411549
Bacillota
TTG
Gln
>WENV183601925
OODJ01007820
235142
Bacillota
CTT
Lys
>WENV183601866
OODJ01006270
148188
Bacillota
CCG
Arg
>WENV183601852
OODJ01005883
148188
Bacillota
CCG
Arg
>WENV183601389
OODJ01001040
80612
Bacillota
GTA
Tyr
>WENV183601205
OODJ01000442
298620
Bacillota
CAT
Met
>WENV183602085
OODJ01014927
235124
Bacillota
TGG
Pro
>WENV183601689
OODJ01003224
235124
Bacillota
TGG
Pro
>WENV183601616
OODJ01002460
235124
Bacillota
TGG
Pro
>WENV183601253
OODJ01000548
338129
Bacillota
TGT
Thr
>WENV183602013
OODJ01011862
157838
Bacillota
GTC
Asp
>WENV183601511
OODJ01001621
157838
Bacillota
GTC
Asp
>WENV183602454
OODJ01064420
144583
Bacillota
ACG
Arg
>WENV183601614
OODJ01002429
144621
Bacillota
GTT
Asn
>WENV183601594
OODJ01002245
144621
Bacillota
GTT
Asn
>WENV183601405
OODJ01001127
243098
Bacillota
GGT
Thr
>WENV183601745
OODJ01003973
58712
Bacillota
CAG
Leu
>WENV183601388
OODJ01001040
58712
Bacillota
CAG
Leu
>WENV183601855
OODJ01006099
245296
Bacillota
CCC
Gly
>WENV183601169
OODJ01000394
239078
Bacillota
TTT
Lys
>WENV183600884
OODJ01000039
344240
Bacillota
GCC
Gly
>WENV183602423
OODJ01058431
152497
Bacillota
GTC
Asp
>WENV183601625
OODJ01002529
196632
Bacillota
GTC
Asp
>WENV183602039
OODJ01012851
248965
Bacillota
GCC
Gly
>WENV183601167
OODJ01000393
178024
Bacillota
TCT
Arg
>WENV183601413
OODJ01001189
157635
Bacillota
TCT
Arg
>WENV183601921
OODJ01007793
343021
Bacillota
CAT
Met
>WENV183601732
OODJ01003785
420471
Bacillota
TCC
Gly
>WENV183601390
OODJ01001042
95563
Bacillota
GTA
Tyr
>WENV183601054
OODJ01000184
338127
Bacillota
TTG
Gln
>WENV183602305
OODJ01032964
152018
Bacillota
CCT
Arg
>WENV183602364
OODJ01045204
272488
Bacillota
GAA
Phe
>WENV183602072
OODJ01014276
292012
Bacillota
TGC
Ala
>WENV183601658
OODJ01002886
338128
Bacillota
TTC
Glu
>WENV183601503
OODJ01001591
338128
Bacillota
TTC
Glu
>WENV183601626
OODJ01002529
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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