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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170057116
CDZG01026410
359755
Bacillota
>WENV170056842
CDZG01017282
144583
Bacillota
ACG
Arg
>WENV170057155
CDZG01027461
144594
Bacillota
CAC
Val
>WENV170057618
CDZG01044141
58712
Bacillota
CAG
Leu
>WENV170057652
CDZG01045144
169968
Bacillota
CAT
Met
>WENV170056552
CDZG01006964
169968
Bacillota
CAT
Met
>WENV170056948
CDZG01020927
245296
Bacillota
CCC
Gly
>WENV170057030
CDZG01023545
148188
Bacillota
CCG
Arg
>WENV170057416
CDZG01038368
245298
Bacillota
CGG
Pro
>WENV170057659
CDZG01045248
338143
Bacillota
CTC
Glu
>WENV170057928
CDZG01057343
338149
Bacillota
CTC
Glu
>WENV170056796
CDZG01015285
338149
Bacillota
CTC
Glu
>WENV170057898
CDZG01056227
411547
Bacillota
CTG
Gln
>WENV170057415
CDZG01038368
411547
Bacillota
CTG
Gln
>WENV170058046
CDZG01061771
272992
Bacillota
CTT
Lys
>WENV170057929
CDZG01057343
272992
Bacillota
CTT
Lys
>WENV170057689
CDZG01046729
272992
Bacillota
CTT
Lys
>WENV170057202
CDZG01029237
235079
Bacillota
GAA
Phe
>WENV170057653
CDZG01045144
272488
Bacillota
GAA
Phe
>WENV170056592
CDZG01007907
272488
Bacillota
GAA
Phe
>WENV170056553
CDZG01006964
272488
Bacillota
GAA
Phe
>WENV170056693
CDZG01011999
235098
Bacillota
GAC
Val
>WENV170056905
CDZG01019115
235098
Bacillota
GAC
Val
>WENV170058188
CDZG01065986
173314
Bacillota
GAT
Ile
>WENV170056596
CDZG01007953
173314
Bacillota
GAT
Ile
>WENV170058116
CDZG01063866
153911
Bacillota
GAT
Ile
>WENV170056413
CDZG01000489
419945
Bacillota
GCA
Cys
>WENV170057669
CDZG01045763
271471
Bacillota
GCC
Gly
>WENV170057183
CDZG01028211
271471
Bacillota
GCC
Gly
>WENV170056973
CDZG01021636
344240
Bacillota
GCC
Gly
>WENV170056491
CDZG01003982
344240
Bacillota
GCC
Gly
>WENV170057964
CDZG01058599
249259
Bacillota
GCC
Gly
>WENV170057454
CDZG01039462
338131
Bacillota
GCC
Gly
>WENV170057093
CDZG01025670
338131
Bacillota
GCC
Gly
>WENV170057592
CDZG01043495
4624
Bacillota
GCT
Ser
>WENV170056761
CDZG01014674
11034
Bacillota
GGA
Ser
>WENV170056590
CDZG01007561
235095
Bacillota
GGT
Thr
>WENV170056630
CDZG01008944
144668
Bacillota
GTC
Asp
>WENV170056608
CDZG01008008
169927
Bacillota
GTC
Asp
>WENV170058161
CDZG01065034
163943
Bacillota
GTC
Asp
>WENV170057979
CDZG01058999
163943
Bacillota
GTC
Asp
>WENV170058122
CDZG01063866
157838
Bacillota
GTC
Asp
>WENV170057216
CDZG01029826
157838
Bacillota
GTC
Asp
>WENV170056479
CDZG01002876
157838
Bacillota
GTC
Asp
>WENV170056432
CDZG01001144
156937
Bacillota
GTG
His
>WENV170057121
CDZG01026679
152149
Bacillota
GTG
His
>WENV170057814
CDZG01052576
287000
Bacillota
GTT
Asn
>WENV170057736
CDZG01048903
144621
Bacillota
GTT
Asn
>WENV170056797
CDZG01015285
144621
Bacillota
GTT
Asn
>WENV170056698
CDZG01012073
144621
Bacillota
GTT
Asn
>WENV170058150
CDZG01064530
267649
Bacillota
TAC
Val
>WENV170056675
CDZG01011012
267556
Bacillota
TAC
Val
>WENV170056980
CDZG01021962
267556
Bacillota
TAC
Val
>WENV170057642
CDZG01045111
267556
Bacillota
TAC
Val
>WENV170057649
CDZG01045144
267556
Bacillota
TAC
Val
>WENV170056409
CDZG01000489
235078
Bacillota
TAC
Val
>WENV170057666
CDZG01045763
263765
Bacillota
TAC
Val
>WENV170057215
CDZG01029826
263765
Bacillota
TAC
Val
>WENV170057180
CDZG01028211
263765
Bacillota
TAC
Val
>WENV170057173
CDZG01028185
249522
Bacillota
TAC
Val
>WENV170056534
CDZG01006421
249522
Bacillota
TAC
Val
>WENV170057600
CDZG01043521
114075
Bacillota
TAG
Leu
>WENV170056802
CDZG01015533
144612
Bacillota
TCT
Arg
>WENV170056431
CDZG01001144
148239
Bacillota
TCT
Arg
>WENV170057759
CDZG01049510
144672
Bacillota
TCT
Arg
>WENV170056786
CDZG01015128
178024
Bacillota
TCT
Arg
>WENV170057266
CDZG01031792
37213
Bacillota
TGA
Ser
>WENV170057591
CDZG01043495
44854
Bacillota
TGA
Ser
>WENV170057931
CDZG01057354
37269
Bacillota
TGA
Ser
>WENV170057256
CDZG01031295
235150
Bacillota
TGC
Ala
>WENV170057440
CDZG01038868
235137
Bacillota
TGC
Ala
>WENV170057732
CDZG01048836
242686
Bacillota
TGC
Ala
>WENV170057803
CDZG01052052
235124
Bacillota
TGG
Pro
>WENV170057462
CDZG01039473
274189
Bacillota
TGT
Thr
>WENV170057374
CDZG01036037
274189
Bacillota
TGT
Thr
>WENV170057117
CDZG01026636
274189
Bacillota
TGT
Thr
>WENV170057036
CDZG01024075
274189
Bacillota
TGT
Thr
>WENV170056498
CDZG01004549
274189
Bacillota
TGT
Thr
>WENV170057530
CDZG01041078
338129
Bacillota
TGT
Thr
>WENV170056606
CDZG01008008
348433
Bacillota
TTC
Glu
>WENV170057858
CDZG01054183
338128
Bacillota
TTC
Glu
>WENV170057273
CDZG01031990
338128
Bacillota
TTC
Glu
>WENV170057161
CDZG01027730
338128
Bacillota
TTC
Glu
>WENV170057126
CDZG01026696
338128
Bacillota
TTC
Glu
>WENV170057072
CDZG01025614
338128
Bacillota
TTC
Glu
>WENV170056496
CDZG01004190
338128
Bacillota
TTC
Glu
>WENV170057516
CDZG01040651
411549
Bacillota
TTG
Gln
>WENV170056427
CDZG01001053
235127
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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