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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170682766
LFIK01001126
109113
Alphaproteobacteria
CAG
Leu
>WENV170682945
LFIK01002972
382584
Alphaproteobacteria
CAC
Val
>WENV170683210
LFIK01006871
382584
Alphaproteobacteria
CAC
Val
>WENV170683058
LFIK01004084
365250
Alphaproteobacteria
GCC
Gly
>WENV170682434
LFIK01000116
435870
Alphaproteobacteria
GCA
Cys
>WENV170682602
LFIK01000488
435870
Alphaproteobacteria
GCA
Cys
>WENV170682781
LFIK01001246
306070
Alphaproteobacteria
CCA
Trp
>WENV170683186
LFIK01006286
306070
Alphaproteobacteria
CCA
Trp
>WENV170683363
LFIK01009880
306070
Alphaproteobacteria
CCA
Trp
>WENV170682385
LFIK01000043
109657
Alphaproteobacteria
TAG
Leu
>WENV170683294
LFIK01008403
436809
Alphaproteobacteria
CTG
Gln
>WENV170683495
LFIK01013412
176908
Alphaproteobacteria
GTC
Asp
>WENV170683494
LFIK01013412
176908
Alphaproteobacteria
GTC
Asp
>WENV170682570
LFIK01000371
176908
Alphaproteobacteria
GTC
Asp
>WENV170682569
LFIK01000371
176908
Alphaproteobacteria
GTC
Asp
>WENV170682405
LFIK01000087
176908
Alphaproteobacteria
GTC
Asp
>WENV170683289
LFIK01008274
148353
Alphaproteobacteria
CAT
Met
>WENV170682926
LFIK01002782
148353
Alphaproteobacteria
CAT
Met
>WENV170682923
LFIK01002757
148353
Alphaproteobacteria
CAT
Met
>WENV170683506
LFIK01013929
428897
Alphaproteobacteria
GCA
Cys
>WENV170683010
LFIK01003413
338282
Alphaproteobacteria
GTT
Asn
>WENV170682852
LFIK01001760
338282
Alphaproteobacteria
GTT
Asn
>WENV170682818
LFIK01001491
338282
Alphaproteobacteria
GTT
Asn
>WENV170682771
LFIK01001142
338282
Alphaproteobacteria
GTT
Asn
>WENV170682763
LFIK01001123
338282
Alphaproteobacteria
GTT
Asn
>WENV170682615
LFIK01000540
147083
Alphaproteobacteria
GGG
Pro
>WENV170682543
LFIK01000279
147083
Alphaproteobacteria
GGG
Pro
>WENV170682784
LFIK01001263
294221
Alphaproteobacteria
GAA
Phe
>WENV170682381
LFIK01000040
294221
Alphaproteobacteria
GAA
Phe
>WENV170683162
LFIK01005780
182651
Alphaproteobacteria
GTC
Asp
>WENV170682486
LFIK01000194
182651
Alphaproteobacteria
GTC
Asp
>WENV170683269
LFIK01007978
183034
Alphaproteobacteria
CCA
Trp
>WENV170682559
LFIK01000332
25760
Alphaproteobacteria
CGA
Ser
>WENV170683489
LFIK01013034
419996
Alphaproteobacteria
GCA
Cys
>WENV170683378
LFIK01010278
419996
Alphaproteobacteria
GCA
Cys
>WENV170682525
LFIK01000241
157999
Alphaproteobacteria
TCT
Arg
>WENV170682815
LFIK01001451
175748
Alphaproteobacteria
CAT
Met
>WENV170682535
LFIK01000265
339750
Alphaproteobacteria
GGT
Thr
>WENV170682335
LFIK01000002
339750
Alphaproteobacteria
GGT
Thr
>WENV170683277
LFIK01008149
161002
Alphaproteobacteria
GTG
His
>WENV170683261
LFIK01007869
161002
Alphaproteobacteria
GTG
His
>WENV170683042
LFIK01003789
161002
Alphaproteobacteria
GTG
His
>WENV170682571
LFIK01000390
161002
Alphaproteobacteria
GTG
His
>WENV170682517
LFIK01000226
161002
Alphaproteobacteria
GTG
His
>WENV170683568
LFIK01015680
59164
Alphaproteobacteria
GAG
Leu
>WENV170682787
LFIK01001284
59164
Alphaproteobacteria
GAG
Leu
>WENV170683513
LFIK01014219
284043
Alphaproteobacteria
CGT
Thr
>WENV170683142
LFIK01005379
284043
Alphaproteobacteria
CGT
Thr
>WENV170683084
LFIK01004563
284043
Alphaproteobacteria
CGT
Thr
>WENV170682522
LFIK01000237
348781
Alphaproteobacteria
GAA
Phe
>WENV170683263
LFIK01007891
163860
Alphaproteobacteria
GGG
Pro
>WENV170682579
LFIK01000427
163860
Alphaproteobacteria
GGG
Pro
>WENV170683225
LFIK01007366
412477
Alphaproteobacteria
GCA
Cys
>WENV170683093
LFIK01004708
338760
Alphaproteobacteria
GAA
Phe
>WENV170682813
LFIK01001440
338760
Alphaproteobacteria
GAA
Phe
>WENV170682789
LFIK01001306
338760
Alphaproteobacteria
GAA
Phe
>WENV170682987
LFIK01003087
270451
Alphaproteobacteria
CGT
Thr
>WENV170682686
LFIK01000899
187569
Alphaproteobacteria
CCG
Arg
>WENV170682851
LFIK01001760
319925
Alphaproteobacteria
TGT
Thr
>WENV170682383
LFIK01000043
266073
Alphaproteobacteria
TTT
Lys
>WENV170683278
LFIK01008230
303842
Alphaproteobacteria
TAC
Val
>WENV170682473
LFIK01000165
303842
Alphaproteobacteria
TAC
Val
>WENV170683076
LFIK01004467
338287
Alphaproteobacteria
GGT
Thr
>WENV170683272
LFIK01008037
339606
Alphaproteobacteria
>WENV170682920
LFIK01002703
339606
Alphaproteobacteria
>WENV170682773
LFIK01001151
339606
Alphaproteobacteria
>WENV170682685
LFIK01000893
339606
Alphaproteobacteria
>WENV170682605
LFIK01000497
339606
Alphaproteobacteria
>WENV170682577
LFIK01000425
339606
Alphaproteobacteria
>WENV170682967
LFIK01003028
26652
Alphaproteobacteria
GGA
Ser
>WENV170683146
LFIK01005412
145208
Alphaproteobacteria
CAT
Met
>WENV170682993
LFIK01003169
185506
Alphaproteobacteria
CAT
Met
>WENV170683648
LFIK01017817
33688
Alphaproteobacteria
CGA
Ser
>WENV170683014
LFIK01003467
33688
Alphaproteobacteria
CGA
Ser
>WENV170682616
LFIK01000540
33688
Alphaproteobacteria
CGA
Ser
>WENV170682484
LFIK01000189
33688
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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