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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
134 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170707134
LNAP01013568
175782
Betaproteobacteria
TCT
Arg
>WENV170707272
LNAP01016464
175782
Betaproteobacteria
TCT
Arg
>WENV170707315
LNAP01017252
175782
Betaproteobacteria
TCT
Arg
>WENV170707526
LNAP01023789
175782
Betaproteobacteria
TCT
Arg
>WENV170706282
LNAP01001833
237516
Betaproteobacteria
GCC
Gly
>WENV170706898
LNAP01008542
237516
Betaproteobacteria
GCC
Gly
>WENV170707225
LNAP01015566
237516
Betaproteobacteria
GCC
Gly
>WENV170707558
LNAP01025364
237516
Betaproteobacteria
GCC
Gly
>WENV170708438
LNAP01082209
237516
Betaproteobacteria
GCC
Gly
>WENV170706795
LNAP01006792
146896
Betaproteobacteria
TTG
Gln
>WENV170706419
LNAP01003043
239009
Betaproteobacteria
TAC
Val
>WENV170706505
LNAP01003684
239009
Betaproteobacteria
TAC
Val
>WENV170706927
LNAP01009090
239009
Betaproteobacteria
TAC
Val
>WENV170706351
LNAP01002327
339575
Betaproteobacteria
CAC
Val
>WENV170707660
LNAP01028784
339575
Betaproteobacteria
CAC
Val
>WENV170708322
LNAP01069778
339575
Betaproteobacteria
CAC
Val
>WENV170707601
LNAP01026831
152292
Betaproteobacteria
TTG
Gln
>WENV170707694
LNAP01029815
356609
Betaproteobacteria
CCT
Arg
>WENV170708690
LNAP01102170
145694
Betaproteobacteria
ACG
Arg
>WENV170707647
LNAP01028323
145694
Betaproteobacteria
ACG
Arg
>WENV170708283
LNAP01065316
154789
Betaproteobacteria
CAT
Met
>WENV170707927
LNAP01040184
154789
Betaproteobacteria
CAT
Met
>WENV170707579
LNAP01026199
154789
Betaproteobacteria
CAT
Met
>WENV170708035
LNAP01045339
251517
Betaproteobacteria
TGT
Thr
>WENV170706948
LNAP01009531
251517
Betaproteobacteria
TGT
Thr
>WENV170706809
LNAP01007064
251517
Betaproteobacteria
TGT
Thr
>WENV170708460
LNAP01084001
16378
Betaproteobacteria
GGA
Ser
>WENV170706501
LNAP01003633
16378
Betaproteobacteria
GGA
Ser
>WENV170708415
LNAP01079571
45122
Betaproteobacteria
TGA
Ser
>WENV170707037
LNAP01011257
45122
Betaproteobacteria
TGA
Ser
>WENV170706526
LNAP01003917
45122
Betaproteobacteria
TGA
Ser
>WENV170706420
LNAP01003066
45122
Betaproteobacteria
TGA
Ser
>WENV170707957
LNAP01041664
412167
Betaproteobacteria
GCA
Cys
>WENV170705693
LNAP01000132
267870
Betaproteobacteria
TTC
Glu
>WENV170707779
LNAP01033657
68998
Betaproteobacteria
CAG
Leu
>WENV170708272
LNAP01064788
290456
Betaproteobacteria
GTT
Asn
>WENV170707639
LNAP01028091
290456
Betaproteobacteria
GTT
Asn
>WENV170707621
LNAP01027646
290456
Betaproteobacteria
GTT
Asn
>WENV170707239
LNAP01015859
290456
Betaproteobacteria
GTT
Asn
>WENV170707106
LNAP01012782
290456
Betaproteobacteria
GTT
Asn
>WENV170707033
LNAP01011242
290456
Betaproteobacteria
GTT
Asn
>WENV170706046
LNAP01000973
290456
Betaproteobacteria
GTT
Asn
>WENV170705844
LNAP01000471
290456
Betaproteobacteria
GTT
Asn
>WENV170708620
LNAP01099765
237459
Betaproteobacteria
CTT
Lys
>WENV170706884
LNAP01008260
237459
Betaproteobacteria
CTT
Lys
>WENV170707863
LNAP01037215
289685
Betaproteobacteria
GCC
Gly
>WENV170706612
LNAP01004652
61237
Betaproteobacteria
TAG
Leu
>WENV170706280
LNAP01001833
61237
Betaproteobacteria
TAG
Leu
>WENV170707213
LNAP01015242
249068
Betaproteobacteria
CGC
Ala
>WENV170706994
LNAP01010562
339995
Betaproteobacteria
CAC
Val
>WENV170705869
LNAP01000536
372150
Betaproteobacteria
CAC
Val
>WENV170707716
LNAP01030945
267882
Betaproteobacteria
TGC
Ala
>WENV170707707
LNAP01030646
147332
Betaproteobacteria
CAT
Met
>WENV170706538
LNAP01004033
147332
Betaproteobacteria
CAT
Met
>WENV170707222
LNAP01015508
145695
Betaproteobacteria
GGG
Pro
>WENV170705687
LNAP01000128
148500
Betaproteobacteria
TGG
Pro
>WENV170706550
LNAP01004157
19888
Betaproteobacteria
GGA
Ser
>WENV170706226
LNAP01001756
19888
Betaproteobacteria
GGA
Ser
>WENV170705992
LNAP01000790
19888
Betaproteobacteria
GGA
Ser
>WENV170705981
LNAP01000768
19888
Betaproteobacteria
GGA
Ser
>WENV170708351
LNAP01072048
267868
Betaproteobacteria
GTG
His
>WENV170708138
LNAP01052185
267868
Betaproteobacteria
GTG
His
>WENV170707777
LNAP01033500
267868
Betaproteobacteria
GTG
His
>WENV170707743
LNAP01031886
267868
Betaproteobacteria
GTG
His
>WENV170707664
LNAP01028845
267868
Betaproteobacteria
GTG
His
>WENV170707061
LNAP01011980
267868
Betaproteobacteria
GTG
His
>WENV170706140
LNAP01001325
267868
Betaproteobacteria
GTG
His
>WENV170706507
LNAP01003733
17915
Betaproteobacteria
GGA
Ser
>WENV170708013
LNAP01044055
48899
Betaproteobacteria
TGA
Ser
>WENV170707041
LNAP01011321
48899
Betaproteobacteria
TGA
Ser
>WENV170706973
LNAP01010123
48899
Betaproteobacteria
TGA
Ser
>WENV170708078
LNAP01048597
253695
Betaproteobacteria
TTT
Lys
>WENV170707365
LNAP01018726
253695
Betaproteobacteria
TTT
Lys
>WENV170707238
LNAP01015834
253695
Betaproteobacteria
TTT
Lys
>WENV170707896
LNAP01038287
339484
Betaproteobacteria
CCT
Arg
>WENV170706902
LNAP01008675
339484
Betaproteobacteria
CCT
Arg
>WENV170706607
LNAP01004598
239247
Betaproteobacteria
CCA
Trp
>WENV170706209
LNAP01001689
4627
Betaproteobacteria
GCT
Ser
>WENV170706208
LNAP01001687
4627
Betaproteobacteria
GCT
Ser
>WENV170708522
LNAP01091038
86049
Betaproteobacteria
GTA
Tyr
>WENV170706397
LNAP01002822
412422
Betaproteobacteria
GCA
Cys
>WENV170707113
LNAP01012902
95934
Betaproteobacteria
GAG
Leu
>WENV170708474
LNAP01085586
147017
Betaproteobacteria
GAT
Ile
>WENV170708468
LNAP01085326
147017
Betaproteobacteria
GAT
Ile
>WENV170708433
LNAP01081327
147017
Betaproteobacteria
GAT
Ile
>WENV170708426
LNAP01080416
147017
Betaproteobacteria
GAT
Ile
>WENV170708195
LNAP01057425
147017
Betaproteobacteria
GAT
Ile
>WENV170707685
LNAP01029506
245575
Betaproteobacteria
CGT
Thr
>WENV170708387
LNAP01076737
238386
Betaproteobacteria
CTT
Lys
>WENV170707164
LNAP01014082
238386
Betaproteobacteria
CTT
Lys
>WENV170706807
LNAP01007000
238386
Betaproteobacteria
CTT
Lys
>WENV170705815
LNAP01000379
238386
Betaproteobacteria
CTT
Lys
>WENV170708168
LNAP01055025
339485
Betaproteobacteria
CAC
Val
>WENV170707735
LNAP01031671
339485
Betaproteobacteria
CAC
Val
>WENV170706632
LNAP01004930
237457
Betaproteobacteria
TGT
Thr
>WENV170705784
LNAP01000292
162621
Betaproteobacteria
TTG
Gln
>WENV170707996
LNAP01043246
237684
Betaproteobacteria
TGT
Thr
>WENV170707316
LNAP01017257
237684
Betaproteobacteria
TGT
Thr
>WENV170706703
LNAP01005745
237684
Betaproteobacteria
TGT
Thr
>WENV170706224
LNAP01001749
237684
Betaproteobacteria
TGT
Thr
>WENV170708010
LNAP01043960
239140
Betaproteobacteria
TTT
Lys
>WENV170707793
LNAP01034304
239140
Betaproteobacteria
TTT
Lys
>WENV170707576
LNAP01025926
239140
Betaproteobacteria
TTT
Lys
>WENV170707396
LNAP01019356
239140
Betaproteobacteria
TTT
Lys
>WENV170707278
LNAP01016620
239140
Betaproteobacteria
TTT
Lys
>WENV170707111
LNAP01012882
239140
Betaproteobacteria
TTT
Lys
>WENV170707028
LNAP01011136
239140
Betaproteobacteria
TTT
Lys
>WENV170706834
LNAP01007403
239140
Betaproteobacteria
TTT
Lys
>WENV170706627
LNAP01004846
239140
Betaproteobacteria
TTT
Lys
>WENV170706346
LNAP01002279
239140
Betaproteobacteria
TTT
Lys
>WENV170708647
LNAP01100863
148282
Betaproteobacteria
TGG
Pro
>WENV170707068
LNAP01012147
148282
Betaproteobacteria
TGG
Pro
>WENV170705833
LNAP01000436
148282
Betaproteobacteria
TGG
Pro
>WENV170707894
LNAP01038175
248767
Betaproteobacteria
GAA
Phe
>WENV170708524
LNAP01091038
352197
Betaproteobacteria
GGT
Thr
>WENV170708289
LNAP01066107
193916
Betaproteobacteria
TTG
Gln
>WENV170706672
LNAP01005379
193916
Betaproteobacteria
TTG
Gln
>WENV170705767
LNAP01000241
193916
Betaproteobacteria
TTG
Gln
>WENV170706949
LNAP01009552
45127
Betaproteobacteria
CGA
Ser
>WENV170706032
LNAP01000915
162620
Betaproteobacteria
ACG
Arg
>WENV170706381
LNAP01002658
144934
Betaproteobacteria
TTG
Gln
>WENV170706154
LNAP01001399
144934
Betaproteobacteria
TTG
Gln
>WENV170706432
LNAP01003119
95723
Betaproteobacteria
CAG
Leu
>WENV170705637
LNAP01000040
95723
Betaproteobacteria
CAG
Leu
>WENV170708538
LNAP01093431
339519
Betaproteobacteria
CCT
Arg
>WENV170708384
LNAP01076034
339519
Betaproteobacteria
CCT
Arg
>WENV170707589
LNAP01026284
339519
Betaproteobacteria
CCT
Arg
>WENV170708211
LNAP01059084
99533
Betaproteobacteria
CAG
Leu
>WENV170707790
LNAP01034252
99533
Betaproteobacteria
CAG
Leu
>WENV170708579
LNAP01098942
23608
Betaproteobacteria
CGA
Ser
>WENV170707960
LNAP01041811
23608
Betaproteobacteria
CGA
Ser
>WENV170707877
LNAP01037585
23608
Betaproteobacteria
CGA
Ser
>WENV170707358
LNAP01018585
23608
Betaproteobacteria
CGA
Ser
>WENV170708462
LNAP01084187
95620
Betaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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