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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
238 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180127451
OATA01001372
196621
Bacillota
GTC
Asp
>WENV180127462
OATA01001388
196621
Bacillota
GTC
Asp
>WENV180127594
OATA01002277
196621
Bacillota
GTC
Asp
>WENV180127679
OATA01003278
196621
Bacillota
GTC
Asp
>WENV180127789
OATA01005244
196621
Bacillota
GTC
Asp
>WENV180128110
OATA01042475
361659
Bacillota
GCC
Gly
>WENV180127491
OATA01001575
37213
Bacillota
TGA
Ser
>WENV180126884
OATA01000137
144612
Bacillota
TCT
Arg
>WENV180127583
OATA01002200
144612
Bacillota
TCT
Arg
>WENV180127666
OATA01003223
144612
Bacillota
TCT
Arg
>WENV180127729
OATA01004052
267649
Bacillota
TAC
Val
>WENV180128023
OATA01022686
267649
Bacillota
TAC
Val
>WENV180127009
OATA01000254
235134
Bacillota
GAA
Phe
>WENV180127240
OATA01000652
267556
Bacillota
TAC
Val
>WENV180127734
OATA01004127
235098
Bacillota
GAC
Val
>WENV180127682
OATA01003314
235098
Bacillota
GAC
Val
>WENV180127652
OATA01002878
235098
Bacillota
GAC
Val
>WENV180127381
OATA01001087
235098
Bacillota
GAC
Val
>WENV180127349
OATA01000960
235098
Bacillota
GAC
Val
>WENV180127324
OATA01000870
235098
Bacillota
GAC
Val
>WENV180128047
OATA01028039
338152
Bacillota
TTC
Glu
>WENV180127412
OATA01001197
338152
Bacillota
TTC
Glu
>WENV180127395
OATA01001146
148239
Bacillota
TCT
Arg
>WENV180127095
OATA01000359
148239
Bacillota
TCT
Arg
>WENV180127065
OATA01000318
148239
Bacillota
TCT
Arg
>WENV180127827
OATA01006328
44854
Bacillota
TGA
Ser
>WENV180127793
OATA01005357
44854
Bacillota
TGA
Ser
>WENV180127127
OATA01000406
44854
Bacillota
TGA
Ser
>WENV180128203
OATA01095523
235154
Bacillota
GTT
Asn
>WENV180127137
OATA01000418
235154
Bacillota
GTT
Asn
>WENV180127942
OATA01012151
144577
Bacillota
GAT
Ile
>WENV180127571
OATA01002050
37071
Bacillota
TGA
Ser
>WENV180126858
OATA01000120
37071
Bacillota
TGA
Ser
>WENV180128031
OATA01023434
246023
Bacillota
TGC
Ala
>WENV180127136
OATA01000416
59312
Bacillota
CAG
Leu
>WENV180127134
OATA01000413
59312
Bacillota
CAG
Leu
>WENV180127011
OATA01000255
59312
Bacillota
CAG
Leu
>WENV180127894
OATA01008298
238910
Bacillota
CTT
Lys
>WENV180127856
OATA01007363
238910
Bacillota
CTT
Lys
>WENV180127215
OATA01000611
238910
Bacillota
CTT
Lys
>WENV180128173
OATA01083171
97943
Bacillota
GTA
Tyr
>WENV180127350
OATA01000971
338147
Bacillota
CTC
Glu
>WENV180126819
OATA01000090
338147
Bacillota
CTC
Glu
>WENV180126696
OATA01000015
338147
Bacillota
CTC
Glu
>WENV180126695
OATA01000015
338147
Bacillota
CTC
Glu
>WENV180126694
OATA01000015
338147
Bacillota
CTC
Glu
>WENV180128091
OATA01039006
235150
Bacillota
TGC
Ala
>WENV180128049
OATA01028775
235150
Bacillota
TGC
Ala
>WENV180128006
OATA01019984
235150
Bacillota
TGC
Ala
>WENV180127934
OATA01010820
235150
Bacillota
TGC
Ala
>WENV180128109
OATA01042475
114359
Bacillota
TAG
Leu
>WENV180127972
OATA01017017
235294
Bacillota
TGC
Ala
>WENV180128077
OATA01035944
340802
Bacillota
TTG
Gln
>WENV180127632
OATA01002531
340802
Bacillota
TTG
Gln
>WENV180126941
OATA01000189
340802
Bacillota
TTG
Gln
>WENV180127201
OATA01000556
293599
Bacillota
CTT
Lys
>WENV180126684
OATA01000012
428544
Bacillota
GCA
Cys
>WENV180127561
OATA01002000
235114
Bacillota
TTT
Lys
>WENV180128039
OATA01024507
341763
Bacillota
CTC
Glu
>WENV180128176
OATA01086545
144668
Bacillota
GTC
Asp
>WENV180127665
OATA01003202
429429
Bacillota
CCA
Trp
>WENV180127545
OATA01001853
429429
Bacillota
CCA
Trp
>WENV180127533
OATA01001829
429429
Bacillota
CCA
Trp
>WENV180127446
OATA01001342
429429
Bacillota
CCA
Trp
>WENV180127821
OATA01006096
429429
Bacillota
CCA
Trp
>WENV180127601
OATA01002347
41154
Bacillota
TAA
Leu
>WENV180127544
OATA01001848
41154
Bacillota
TAA
Leu
>WENV180127515
OATA01001708
41154
Bacillota
TAA
Leu
>WENV180127133
OATA01000413
44859
Bacillota
AAG
Leu
>WENV180127132
OATA01000413
44859
Bacillota
AAG
Leu
>WENV180127489
OATA01001571
11034
Bacillota
GGA
Ser
>WENV180127488
OATA01001571
11034
Bacillota
GGA
Ser
>WENV180127409
OATA01001168
11034
Bacillota
GGA
Ser
>WENV180127311
OATA01000844
11034
Bacillota
GGA
Ser
>WENV180127623
OATA01002517
235117
Bacillota
TAC
Val
>WENV180127416
OATA01001203
235117
Bacillota
TAC
Val
>WENV180127368
OATA01001022
235117
Bacillota
TAC
Val
>WENV180127396
OATA01001146
156937
Bacillota
GTG
His
>WENV180126940
OATA01000189
156937
Bacillota
GTG
His
>WENV180128061
OATA01032712
274189
Bacillota
TGT
Thr
>WENV180127375
OATA01001067
274189
Bacillota
TGT
Thr
>WENV180127977
OATA01017450
235079
Bacillota
GAA
Phe
>WENV180127973
OATA01017018
235079
Bacillota
GAA
Phe
>WENV180127890
OATA01008204
235079
Bacillota
GAA
Phe
>WENV180127625
OATA01002517
235079
Bacillota
GAA
Phe
>WENV180127521
OATA01001747
235079
Bacillota
GAA
Phe
>WENV180127452
OATA01001372
235079
Bacillota
GAA
Phe
>WENV180127254
OATA01000678
235079
Bacillota
GAA
Phe
>WENV180127118
OATA01000397
235079
Bacillota
GAA
Phe
>WENV180128139
OATA01053076
295714
Bacillota
GCC
Gly
>WENV180127805
OATA01005556
295714
Bacillota
GCC
Gly
>WENV180127537
OATA01001829
295714
Bacillota
GCC
Gly
>WENV180127535
OATA01001829
295714
Bacillota
GCC
Gly
>WENV180127297
OATA01000790
295714
Bacillota
GCC
Gly
>WENV180127296
OATA01000790
295714
Bacillota
GCC
Gly
>WENV180127238
OATA01000641
295714
Bacillota
GCC
Gly
>WENV180126993
OATA01000241
295714
Bacillota
GCC
Gly
>WENV180126992
OATA01000241
295714
Bacillota
GCC
Gly
>WENV180126990
OATA01000238
295714
Bacillota
GCC
Gly
>WENV180126909
OATA01000159
295714
Bacillota
GCC
Gly
>WENV180127941
OATA01012151
235087
Bacillota
TGC
Ala
>WENV180127818
OATA01006073
173314
Bacillota
GAT
Ile
>WENV180127307
OATA01000842
149041
Bacillota
GTC
Asp
>WENV180127028
OATA01000276
149041
Bacillota
GTC
Asp
>WENV180128032
OATA01023718
338149
Bacillota
CTC
Glu
>WENV180127975
OATA01017349
338149
Bacillota
CTC
Glu
>WENV180127421
OATA01001243
338149
Bacillota
CTC
Glu
>WENV180127223
OATA01000626
338149
Bacillota
CTC
Glu
>WENV180127082
OATA01000346
338149
Bacillota
CTC
Glu
>WENV180127745
OATA01004269
271471
Bacillota
GCC
Gly
>WENV180127255
OATA01000678
271471
Bacillota
GCC
Gly
>WENV180126779
OATA01000059
271471
Bacillota
GCC
Gly
>WENV180126683
OATA01000012
271471
Bacillota
GCC
Gly
>WENV180128171
OATA01080586
144766
Bacillota
CAT
Met
>WENV180127872
OATA01007641
245298
Bacillota
CGG
Pro
>WENV180127753
OATA01004419
245298
Bacillota
CGG
Pro
>WENV180127690
OATA01003406
245298
Bacillota
CGG
Pro
>WENV180127706
OATA01003715
37269
Bacillota
TGA
Ser
>WENV180127345
OATA01000945
37269
Bacillota
TGA
Ser
>WENV180127225
OATA01000628
37269
Bacillota
TGA
Ser
>WENV180126802
OATA01000078
37269
Bacillota
TGA
Ser
>WENV180128034
OATA01024206
287000
Bacillota
GTT
Asn
>WENV180127785
OATA01005140
287000
Bacillota
GTT
Asn
>WENV180127413
OATA01001197
287000
Bacillota
GTT
Asn
>WENV180127411
OATA01001197
287000
Bacillota
GTT
Asn
>WENV180126922
OATA01000171
169968
Bacillota
CAT
Met
>WENV180126746
OATA01000036
173810
Bacillota
CAT
Met
>WENV180127681
OATA01003299
162445
Bacillota
CAT
Met
>WENV180127900
OATA01008446
162445
Bacillota
CAT
Met
>WENV180127898
OATA01008446
162445
Bacillota
CAT
Met
>WENV180127940
OATA01011485
152492
Bacillota
GGG
Pro
>WENV180126972
OATA01000220
152492
Bacillota
GGG
Pro
>WENV180126709
OATA01000022
152492
Bacillota
GGG
Pro
>WENV180127116
OATA01000397
235078
Bacillota
TAC
Val
>WENV180127455
OATA01001382
100326
Bacillota
GTA
Tyr
>WENV180127319
OATA01000862
100326
Bacillota
GTA
Tyr
>WENV180126896
OATA01000145
100326
Bacillota
GTA
Tyr
>WENV180126750
OATA01000038
100326
Bacillota
GTA
Tyr
>WENV180127631
OATA01002531
144610
Bacillota
GTG
His
>WENV180127559
OATA01002000
144610
Bacillota
GTG
His
>WENV180127436
OATA01001301
144610
Bacillota
GTG
His
>WENV180127096
OATA01000359
144610
Bacillota
GTG
His
>WENV180127066
OATA01000318
144610
Bacillota
GTG
His
>WENV180127010
OATA01000254
240017
Bacillota
GCC
Gly
>WENV180126716
OATA01000024
240017
Bacillota
GCC
Gly
>WENV180127978
OATA01017515
411547
Bacillota
CTG
Gln
>WENV180127871
OATA01007641
411547
Bacillota
CTG
Gln
>WENV180127689
OATA01003406
411547
Bacillota
CTG
Gln
>WENV180127530
OATA01001812
411547
Bacillota
CTG
Gln
>WENV180127192
OATA01000541
411547
Bacillota
CTG
Gln
>WENV180126966
OATA01000205
411547
Bacillota
CTG
Gln
>WENV180126748
OATA01000036
147684
Bacillota
ACG
Arg
>WENV180127828
OATA01006328
4624
Bacillota
GCT
Ser
>WENV180127794
OATA01005357
4624
Bacillota
GCT
Ser
>WENV180127128
OATA01000406
4624
Bacillota
GCT
Ser
>WENV180127007
OATA01000254
263765
Bacillota
TAC
Val
>WENV180126776
OATA01000059
263765
Bacillota
TAC
Val
>WENV180126715
OATA01000024
263765
Bacillota
TAC
Val
>WENV180126681
OATA01000012
263765
Bacillota
TAC
Val
>WENV180127998
OATA01019163
412387
Bacillota
GCA
Cys
>WENV180128087
OATA01038936
411584
Bacillota
TCC
Gly
>WENV180127790
OATA01005244
235095
Bacillota
GGT
Thr
>WENV180128120
OATA01045762
235095
Bacillota
GGT
Thr
>WENV180127787
OATA01005244
235095
Bacillota
GGT
Thr
>WENV180127680
OATA01003278
235095
Bacillota
GGT
Thr
>WENV180127677
OATA01003278
235095
Bacillota
GGT
Thr
>WENV180127463
OATA01001388
235095
Bacillota
GGT
Thr
>WENV180127167
OATA01000499
344183
Bacillota
CTG
Gln
>WENV180127305
OATA01000842
239832
Bacillota
TGT
Thr
>WENV180127030
OATA01000276
239832
Bacillota
TGT
Thr
>WENV180127526
OATA01001778
185292
Bacillota
ACG
Arg
>WENV180128081
OATA01036797
150597
Bacillota
TCT
Arg
>WENV180126939
OATA01000189
152151
Bacillota
TCT
Arg
>WENV180127658
OATA01002995
411549
Bacillota
TTG
Gln
>WENV180127597
OATA01002277
411549
Bacillota
TTG
Gln
>WENV180127720
OATA01003972
235142
Bacillota
CTT
Lys
>WENV180127049
OATA01000296
235142
Bacillota
CTT
Lys
>WENV180127218
OATA01000611
245386
Bacillota
CCA
Trp
>WENV180127804
OATA01005544
148188
Bacillota
CCG
Arg
>WENV180127659
OATA01003065
148188
Bacillota
CCG
Arg
>WENV180127563
OATA01002038
148188
Bacillota
CCG
Arg
>WENV180127370
OATA01001023
148188
Bacillota
CCG
Arg
>WENV180128060
OATA01030948
80612
Bacillota
GTA
Tyr
>WENV180127468
OATA01001411
80612
Bacillota
GTA
Tyr
>WENV180127206
OATA01000565
80612
Bacillota
GTA
Tyr
>WENV180126809
OATA01000084
256380
Bacillota
>WENV180128080
OATA01036797
411739
Bacillota
TCC
Gly
>WENV180127688
OATA01003396
235124
Bacillota
TGG
Pro
>WENV180127538
OATA01001836
235124
Bacillota
TGG
Pro
>WENV180127511
OATA01001683
235124
Bacillota
TGG
Pro
>WENV180127713
OATA01003844
338129
Bacillota
TGT
Thr
>WENV180127499
OATA01001628
338129
Bacillota
TGT
Thr
>WENV180128082
OATA01036797
279635
Bacillota
GTG
His
>WENV180128194
OATA01093321
144583
Bacillota
ACG
Arg
>WENV180127912
OATA01009377
144583
Bacillota
ACG
Arg
>WENV180128075
OATA01035944
144672
Bacillota
TCT
Arg
>WENV180127289
OATA01000770
144672
Bacillota
TCT
Arg
>WENV180128072
OATA01035006
144652
Bacillota
GTC
Asp
>WENV180127567
OATA01002041
144652
Bacillota
GTC
Asp
>WENV180126893
OATA01000145
144652
Bacillota
GTC
Asp
>WENV180127907
OATA01009035
247734
Bacillota
TGC
Ala
>WENV180127788
OATA01005244
235171
Bacillota
CCA
Trp
>WENV180127461
OATA01001388
235171
Bacillota
CCA
Trp
>WENV180127457
OATA01001382
238974
Bacillota
GAA
Phe
>WENV180127321
OATA01000862
238974
Bacillota
GAA
Phe
>WENV180127422
OATA01001243
144621
Bacillota
GTT
Asn
>WENV180127301
OATA01000823
144621
Bacillota
GTT
Asn
>WENV180127266
OATA01000713
144621
Bacillota
GTT
Asn
>WENV180127224
OATA01000626
144621
Bacillota
GTT
Asn
>WENV180127181
OATA01000512
144621
Bacillota
GTT
Asn
>WENV180127083
OATA01000346
144621
Bacillota
GTT
Asn
>WENV180126931
OATA01000183
235113
Bacillota
GAA
Phe
>WENV180128151
OATA01060696
199895
Bacillota
GTC
Asp
>WENV180128196
OATA01094559
58712
Bacillota
CAG
Leu
>WENV180127962
OATA01015633
58712
Bacillota
CAG
Leu
>WENV180127913
OATA01009440
58712
Bacillota
CAG
Leu
>WENV180127895
OATA01008346
58712
Bacillota
CAG
Leu
>WENV180127783
OATA01005081
58712
Bacillota
CAG
Leu
>WENV180128183
OATA01092206
144762
Bacillota
TCT
Arg
>WENV180127579
OATA01002186
245296
Bacillota
CCC
Gly
>WENV180127502
OATA01001658
245296
Bacillota
CCC
Gly
>WENV180128033
OATA01023718
272992
Bacillota
CTT
Lys
>WENV180127976
OATA01017349
272992
Bacillota
CTT
Lys
>WENV180127944
OATA01012631
272992
Bacillota
CTT
Lys
>WENV180127761
OATA01004580
272992
Bacillota
CTT
Lys
>WENV180127630
OATA01002531
157635
Bacillota
TCT
Arg
>WENV180127719
OATA01003944
144594
Bacillota
CAC
Val
>WENV180127475
OATA01001489
144594
Bacillota
CAC
Val
>WENV180127470
OATA01001444
144594
Bacillota
CAC
Val
>WENV180127048
OATA01000295
95563
Bacillota
GTA
Tyr
>WENV180126837
OATA01000105
338127
Bacillota
TTG
Gln
>WENV180127406
OATA01001150
272488
Bacillota
GAA
Phe
>WENV180126923
OATA01000171
272488
Bacillota
GAA
Phe
>WENV180127948
OATA01013172
119513
Bacillota
CAA
Leu
>WENV180128044
OATA01026890
292012
Bacillota
TGC
Ala
>WENV180128191
OATA01092842
273862
Bacillota
TGC
Ala
>WENV180128133
OATA01050692
338207
Bacillota
TTC
Glu
>WENV180128155
OATA01061581
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
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