This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180332269
OBLC01131276
24650
Bacillota
TAA
Leu
>WENV180331634
OBLC01000056
196621
Bacillota
GTC
Asp
>WENV180331689
OBLC01000113
196621
Bacillota
GTC
Asp
>WENV180332289
OBLC01132639
196621
Bacillota
GTC
Asp
>WENV180331740
OBLC01000192
37213
Bacillota
TGA
Ser
>WENV180331710
OBLC01000131
144612
Bacillota
TCT
Arg
>WENV180332003
OBLC01012733
154063
Bacillota
CGG
Pro
>WENV180332064
OBLC01022276
235134
Bacillota
GAA
Phe
>WENV180332132
OBLC01041665
267556
Bacillota
TAC
Val
>WENV180332081
OBLC01027499
267556
Bacillota
TAC
Val
>WENV180331856
OBLC01001088
235098
Bacillota
GAC
Val
>WENV180331760
OBLC01000296
235098
Bacillota
GAC
Val
>WENV180332278
OBLC01131512
338152
Bacillota
TTC
Glu
>WENV180332150
OBLC01046911
338152
Bacillota
TTC
Glu
>WENV180332059
OBLC01022028
338152
Bacillota
TTC
Glu
>WENV180331883
OBLC01001536
148239
Bacillota
TCT
Arg
>WENV180331722
OBLC01000149
44854
Bacillota
TGA
Ser
>WENV180332268
OBLC01131269
235154
Bacillota
GTT
Asn
>WENV180332092
OBLC01030768
235154
Bacillota
GTT
Asn
>WENV180332028
OBLC01015985
235154
Bacillota
GTT
Asn
>WENV180332021
OBLC01014449
144577
Bacillota
GAT
Ile
>WENV180331997
OBLC01012513
246023
Bacillota
TGC
Ala
>WENV180331991
OBLC01011138
338147
Bacillota
CTC
Glu
>WENV180332129
OBLC01041026
235150
Bacillota
TGC
Ala
>WENV180332113
OBLC01036530
235150
Bacillota
TGC
Ala
>WENV180332087
OBLC01028527
235150
Bacillota
TGC
Ala
>WENV180332290
OBLC01132642
235137
Bacillota
TGC
Ala
>WENV180332234
OBLC01103275
235137
Bacillota
TGC
Ala
>WENV180332189
OBLC01065285
235137
Bacillota
TGC
Ala
>WENV180331957
OBLC01005698
235137
Bacillota
TGC
Ala
>WENV180331929
OBLC01003586
235137
Bacillota
TGC
Ala
>WENV180331907
OBLC01002506
235137
Bacillota
TGC
Ala
>WENV180332252
OBLC01118697
340802
Bacillota
TTG
Gln
>WENV180331771
OBLC01000298
340802
Bacillota
TTG
Gln
>WENV180331947
OBLC01005090
338143
Bacillota
CTC
Glu
>WENV180331953
OBLC01005547
341763
Bacillota
CTC
Glu
>WENV180332147
OBLC01046707
144668
Bacillota
GTC
Asp
>WENV180332271
OBLC01131354
198770
Bacillota
GTC
Asp
>WENV180331791
OBLC01000363
198770
Bacillota
GTC
Asp
>WENV180331669
OBLC01000093
198770
Bacillota
GTC
Asp
>WENV180332293
OBLC01132678
429429
Bacillota
CCA
Trp
>WENV180331878
OBLC01001522
429429
Bacillota
CCA
Trp
>WENV180332108
OBLC01034926
41154
Bacillota
TAA
Leu
>WENV180332120
OBLC01039857
44859
Bacillota
AAG
Leu
>WENV180332034
OBLC01016477
44859
Bacillota
AAG
Leu
>WENV180331752
OBLC01000270
11034
Bacillota
GGA
Ser
>WENV180331754
OBLC01000270
235117
Bacillota
TAC
Val
>WENV180332192
OBLC01066402
274189
Bacillota
TGT
Thr
>WENV180331777
OBLC01000328
235079
Bacillota
GAA
Phe
>WENV180331687
OBLC01000113
235079
Bacillota
GAA
Phe
>WENV180332066
OBLC01022278
295714
Bacillota
GCC
Gly
>WENV180332049
OBLC01019847
295714
Bacillota
GCC
Gly
>WENV180332042
OBLC01017805
295714
Bacillota
GCC
Gly
>WENV180331880
OBLC01001522
295714
Bacillota
GCC
Gly
>WENV180331869
OBLC01001385
295714
Bacillota
GCC
Gly
>WENV180331759
OBLC01000295
295714
Bacillota
GCC
Gly
>WENV180331739
OBLC01000189
295714
Bacillota
GCC
Gly
>WENV180332020
OBLC01014449
235087
Bacillota
TGC
Ala
>WENV180331724
OBLC01000151
338149
Bacillota
CTC
Glu
>WENV180331655
OBLC01000068
338149
Bacillota
CTC
Glu
>WENV180331714
OBLC01000132
245298
Bacillota
CGG
Pro
>WENV180332188
OBLC01064957
37269
Bacillota
TGA
Ser
>WENV180331747
OBLC01000234
37269
Bacillota
TGA
Ser
>WENV180332082
OBLC01027499
155089
Bacillota
CAT
Met
>WENV180332267
OBLC01131238
287000
Bacillota
GTT
Asn
>WENV180332149
OBLC01046911
287000
Bacillota
GTT
Asn
>WENV180332058
OBLC01022028
287000
Bacillota
GTT
Asn
>WENV180332117
OBLC01039098
169968
Bacillota
CAT
Met
>WENV180331807
OBLC01000415
169968
Bacillota
CAT
Met
>WENV180332011
OBLC01013737
413152
Bacillota
TCC
Gly
>WENV180332274
OBLC01131387
162445
Bacillota
CAT
Met
>WENV180331839
OBLC01000765
152492
Bacillota
GGG
Pro
>WENV180332131
OBLC01041665
144599
Bacillota
GTC
Asp
>WENV180332285
OBLC01132469
100326
Bacillota
GTA
Tyr
>WENV180331823
OBLC01000577
100326
Bacillota
GTA
Tyr
>WENV180332251
OBLC01118697
144610
Bacillota
GTG
His
>WENV180331884
OBLC01001536
144610
Bacillota
GTG
His
>WENV180332065
OBLC01022276
240017
Bacillota
GCC
Gly
>WENV180331813
OBLC01000476
411547
Bacillota
CTG
Gln
>WENV180331713
OBLC01000132
411547
Bacillota
CTG
Gln
>WENV180331742
OBLC01000201
147684
Bacillota
ACG
Arg
>WENV180331723
OBLC01000149
4624
Bacillota
GCT
Ser
>WENV180332225
OBLC01097657
18852
Bacillota
GCT
Ser
>WENV180331636
OBLC01000056
235095
Bacillota
GGT
Thr
>WENV180331635
OBLC01000056
235095
Bacillota
GGT
Thr
>WENV180331789
OBLC01000363
239832
Bacillota
TGT
Thr
>WENV180331671
OBLC01000093
239832
Bacillota
TGT
Thr
>WENV180331712
OBLC01000132
411549
Bacillota
TTG
Gln
>WENV180331984
OBLC01009639
235142
Bacillota
CTT
Lys
>WENV180331757
OBLC01000281
148188
Bacillota
CCG
Arg
>WENV180331692
OBLC01000113
80612
Bacillota
GTA
Tyr
>WENV180331859
OBLC01001157
256380
Bacillota
>WENV180331894
OBLC01001727
241432
Bacillota
TGT
Thr
>WENV180331779
OBLC01000333
235124
Bacillota
TGG
Pro
>WENV180332039
OBLC01016794
254433
Bacillota
TAC
Val
>WENV180331781
OBLC01000335
338129
Bacillota
TGT
Thr
>WENV180331620
OBLC01000042
144583
Bacillota
ACG
Arg
>WENV180332137
OBLC01043696
144672
Bacillota
TCT
Arg
>WENV180331769
OBLC01000298
144672
Bacillota
TCT
Arg
>WENV180331763
OBLC01000298
144672
Bacillota
TCT
Arg
>WENV180331803
OBLC01000415
144652
Bacillota
GTC
Asp
>WENV180331633
OBLC01000056
235171
Bacillota
CCA
Trp
>WENV180331826
OBLC01000587
238974
Bacillota
GAA
Phe
>WENV180331821
OBLC01000576
238974
Bacillota
GAA
Phe
>WENV180331686
OBLC01000107
144621
Bacillota
GTT
Asn
>WENV180331656
OBLC01000068
144621
Bacillota
GTT
Asn
>WENV180332202
OBLC01076665
235113
Bacillota
GAA
Phe
>WENV180331987
OBLC01011053
235113
Bacillota
GAA
Phe
>WENV180331735
OBLC01000169
58712
Bacillota
CAG
Leu
>WENV180331715
OBLC01000132
58712
Bacillota
CAG
Leu
>WENV180331666
OBLC01000090
245296
Bacillota
CCC
Gly
>WENV180331725
OBLC01000151
272992
Bacillota
CTT
Lys
>WENV180332228
OBLC01100364
198135
Bacillota
GAT
Ile
>WENV180331971
OBLC01007168
157635
Bacillota
TCT
Arg
>WENV180331825
OBLC01000582
144594
Bacillota
CAC
Val
>WENV180332275
OBLC01131426
95563
Bacillota
GTA
Tyr
>WENV180331784
OBLC01000351
414486
Bacillota
CCC
Gly
>WENV180331808
OBLC01000415
272488
Bacillota
GAA
Phe
>WENV180331887
OBLC01001536
114075
Bacillota
TAG
Leu
>WENV180332248
OBLC01112753
292012
Bacillota
TGC
Ala
>WENV180331892
OBLC01001715
273862
Bacillota
TGC
Ala
>WENV180331834
OBLC01000638
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK