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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180763451
ODIA01001040
243647
Bacillota
TTT
Lys
>WENV180763317
ODIA01000502
178679
Bacillota
CAT
Met
>WENV180763364
ODIA01000671
16842
Bacillota
CGA
Ser
>WENV180763434
ODIA01000965
16842
Bacillota
CGA
Ser
>WENV180763436
ODIA01000973
37213
Bacillota
TGA
Ser
>WENV180764103
ODIA01018392
342730
Bacillota
CTC
Glu
>WENV180763206
ODIA01000260
267649
Bacillota
TAC
Val
>WENV180763635
ODIA01002404
267649
Bacillota
TAC
Val
>WENV180764353
ODIA01069651
267649
Bacillota
TAC
Val
>WENV180764403
ODIA01094496
267649
Bacillota
TAC
Val
>WENV180763542
ODIA01001591
246392
Bacillota
GTT
Asn
>WENV180763305
ODIA01000483
246392
Bacillota
GTT
Asn
>WENV180763877
ODIA01007509
155040
Bacillota
GAT
Ile
>WENV180763781
ODIA01005045
37549
Bacillota
TAA
Leu
>WENV180764078
ODIA01016673
148348
Bacillota
GTC
Asp
>WENV180763886
ODIA01007848
148348
Bacillota
GTC
Asp
>WENV180764198
ODIA01027765
243099
Bacillota
GTT
Asn
>WENV180764073
ODIA01016673
243099
Bacillota
GTT
Asn
>WENV180763209
ODIA01000291
243119
Bacillota
CTT
Lys
>WENV180764429
ODIA01102103
235150
Bacillota
TGC
Ala
>WENV180763546
ODIA01001614
152047
Bacillota
GGG
Pro
>WENV180764065
ODIA01016635
235137
Bacillota
TGC
Ala
>WENV180764077
ODIA01016673
241761
Bacillota
TAC
Val
>WENV180763885
ODIA01007848
241761
Bacillota
TAC
Val
>WENV180763544
ODIA01001591
241761
Bacillota
TAC
Val
>WENV180763309
ODIA01000483
241761
Bacillota
TAC
Val
>WENV180763740
ODIA01004325
16834
Bacillota
GCT
Ser
>WENV180764186
ODIA01025106
243646
Bacillota
GTT
Asn
>WENV180763450
ODIA01001040
243646
Bacillota
GTT
Asn
>WENV180763365
ODIA01000677
114002
Bacillota
CAA
Leu
>WENV180763060
ODIA01000062
342736
Bacillota
TTG
Gln
>WENV180763480
ODIA01001178
37437
Bacillota
TAA
Leu
>WENV180763379
ODIA01000702
37437
Bacillota
TAA
Leu
>WENV180763779
ODIA01005045
340265
Bacillota
GCC
Gly
>WENV180763304
ODIA01000483
340265
Bacillota
GCC
Gly
>WENV180764288
ODIA01043925
113951
Bacillota
GTA
Tyr
>WENV180763739
ODIA01004318
243612
Bacillota
TAC
Val
>WENV180764036
ODIA01014434
155089
Bacillota
CAT
Met
>WENV180763565
ODIA01001742
37551
Bacillota
CGA
Ser
>WENV180764079
ODIA01016673
286137
Bacillota
GAA
Phe
>WENV180763887
ODIA01007848
286137
Bacillota
GAA
Phe
>WENV180763978
ODIA01011396
81373
Bacillota
GTA
Tyr
>WENV180763976
ODIA01011396
81373
Bacillota
GTA
Tyr
>WENV180763839
ODIA01006526
81373
Bacillota
GTA
Tyr
>WENV180764238
ODIA01033895
147135
Bacillota
ACG
Arg
>WENV180764387
ODIA01085826
144599
Bacillota
GTC
Asp
>WENV180763488
ODIA01001193
148268
Bacillota
CGG
Pro
>WENV180763321
ODIA01000502
242848
Bacillota
GAA
Phe
>WENV180763397
ODIA01000806
342895
Bacillota
CAT
Met
>WENV180763486
ODIA01001193
243399
Bacillota
CCA
Trp
>WENV180763336
ODIA01000591
18852
Bacillota
GCT
Ser
>WENV180763780
ODIA01005045
419945
Bacillota
GCA
Cys
>WENV180764320
ODIA01050595
194150
Bacillota
TGG
Pro
>WENV180763328
ODIA01000548
194150
Bacillota
TGG
Pro
>WENV180764279
ODIA01042820
241471
Bacillota
TGC
Ala
>WENV180763961
ODIA01010687
241471
Bacillota
TGC
Ala
>WENV180763502
ODIA01001271
185292
Bacillota
ACG
Arg
>WENV180764369
ODIA01075634
250349
Bacillota
GAA
Phe
>WENV180764004
ODIA01012968
250349
Bacillota
GAA
Phe
>WENV180763240
ODIA01000351
250349
Bacillota
GAA
Phe
>WENV180763185
ODIA01000213
250349
Bacillota
GAA
Phe
>WENV180764229
ODIA01031560
96694
Bacillota
TAG
Leu
>WENV180764059
ODIA01015782
152045
Bacillota
CAT
Met
>WENV180763458
ODIA01001099
235701
Bacillota
TTT
Lys
>WENV180764114
ODIA01018693
154711
Bacillota
TGG
Pro
>WENV180763962
ODIA01010687
152019
Bacillota
GAT
Ile
>WENV180763330
ODIA01000548
152046
Bacillota
TCT
Arg
>WENV180763676
ODIA01003069
237846
Bacillota
GCC
Gly
>WENV180763657
ODIA01002767
237846
Bacillota
GCC
Gly
>WENV180764418
ODIA01097316
235197
Bacillota
GTC
Asp
>WENV180764003
ODIA01012968
235197
Bacillota
GTC
Asp
>WENV180763239
ODIA01000351
235197
Bacillota
GTC
Asp
>WENV180763184
ODIA01000213
235197
Bacillota
GTC
Asp
>WENV180764413
ODIA01096404
368876
Bacillota
GCC
Gly
>WENV180763449
ODIA01001040
368876
Bacillota
GCC
Gly
>WENV180763241
ODIA01000351
368876
Bacillota
GCC
Gly
>WENV180763186
ODIA01000213
368876
Bacillota
GCC
Gly
>WENV180763487
ODIA01001193
152051
Bacillota
ACG
Arg
>WENV180763893
ODIA01007848
84171
Bacillota
GAG
Leu
>WENV180763891
ODIA01007848
84171
Bacillota
GAG
Leu
>WENV180764076
ODIA01016673
241526
Bacillota
CTT
Lys
>WENV180763884
ODIA01007848
241526
Bacillota
CTT
Lys
>WENV180764285
ODIA01043925
147183
Bacillota
GTT
Asn
>WENV180763611
ODIA01002197
147183
Bacillota
GTT
Asn
>WENV180763564
ODIA01001737
147183
Bacillota
GTT
Asn
>WENV180763456
ODIA01001099
243613
Bacillota
GTG
His
>WENV180763561
ODIA01001724
144672
Bacillota
TCT
Arg
>WENV180764311
ODIA01048681
127572
Bacillota
ACG
Arg
>WENV180763063
ODIA01000064
256920
Bacillota
TTT
Lys
>WENV180763418
ODIA01000900
152491
Bacillota
CAT
Met
>WENV180763720
ODIA01003979
241638
Bacillota
GTG
His
>WENV180763906
ODIA01008592
194064
Bacillota
GAT
Ile
>WENV180763414
ODIA01000900
273029
Bacillota
TGT
Thr
>WENV180764058
ODIA01015782
281472
Bacillota
GGT
Thr
>WENV180763417
ODIA01000900
281472
Bacillota
GGT
Thr
>WENV180764322
ODIA01050595
178024
Bacillota
TCT
Arg
>WENV180764268
ODIA01040230
413657
Bacillota
CCC
Gly
>WENV180764131
ODIA01019970
152018
Bacillota
CCT
Arg
>WENV180763108
ODIA01000096
272488
Bacillota
GAA
Phe
>WENV180763892
ODIA01007848
81598
Bacillota
CAG
Leu
>WENV180763994
ODIA01012063
238945
Bacillota
GCC
Gly
>WENV180763625
ODIA01002319
238945
Bacillota
GCC
Gly
>WENV180764415
ODIA01096688
287034
Bacillota
GTT
Asn
>WENV180764411
ODIA01096126
287034
Bacillota
GTT
Asn
>WENV180763737
ODIA01004318
287034
Bacillota
GTT
Asn
>WENV180764267
ODIA01039582
413179
Bacillota
CCC
Gly
>WENV180764240
ODIA01034542
273862
Bacillota
TGC
Ala
>WENV180763841
ODIA01006537
273862
Bacillota
TGC
Ala
>WENV180763457
ODIA01001099
343027
Bacillota
TTG
Gln
>WENV180763221
ODIA01000328
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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