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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170973998
MTKY01052731
237201
Alphaproteobacteria
CAT
Met
>WENV170974328
MTKY01057837
365250
Alphaproteobacteria
GCC
Gly
>WENV170973411
MTKY01037443
24760
Alphaproteobacteria
TGA
Ser
>WENV170974355
MTKY01058566
97676
Alphaproteobacteria
CAG
Leu
>WENV170974465
MTKY01062835
339325
Alphaproteobacteria
CAC
Val
>WENV170974596
MTKY01066557
339325
Alphaproteobacteria
CAC
Val
>WENV170974950
MTKY01082434
339325
Alphaproteobacteria
CAC
Val
>WENV170973545
MTKY01047279
352247
Alphaproteobacteria
TTG
Gln
>WENV170974261
MTKY01056230
184120
Alphaproteobacteria
GTG
His
>WENV170973257
MTKY01022708
23561
Alphaproteobacteria
GGA
Ser
>WENV170974741
MTKY01072886
350430
Alphaproteobacteria
TGT
Thr
>WENV170974749
MTKY01073177
254188
Alphaproteobacteria
CCA
Trp
>WENV170974891
MTKY01079957
342732
Alphaproteobacteria
CCC
Gly
>WENV170974966
MTKY01082882
342732
Alphaproteobacteria
CCC
Gly
>WENV170973368
MTKY01032892
146628
Alphaproteobacteria
ACG
Arg
>WENV170974832
MTKY01076897
146628
Alphaproteobacteria
ACG
Arg
>WENV170972904
MTKY01004336
146854
Alphaproteobacteria
CCT
Arg
>WENV170974374
MTKY01059140
243803
Alphaproteobacteria
CAT
Met
>WENV170973304
MTKY01026258
257000
Alphaproteobacteria
GAA
Phe
>WENV170973404
MTKY01036257
257000
Alphaproteobacteria
GAA
Phe
>WENV170973566
MTKY01047759
257000
Alphaproteobacteria
GAA
Phe
>WENV170974327
MTKY01057834
257192
Alphaproteobacteria
CTT
Lys
>WENV170974844
MTKY01077174
129295
Alphaproteobacteria
GGG
Pro
>WENV170974665
MTKY01070916
342876
Alphaproteobacteria
GAC
Val
>WENV170972980
MTKY01007242
339884
Alphaproteobacteria
TTC
Glu
>WENV170974438
MTKY01061258
339884
Alphaproteobacteria
TTC
Glu
>WENV170974360
MTKY01058640
148854
Alphaproteobacteria
GTC
Asp
>WENV170974105
MTKY01054152
411636
Alphaproteobacteria
GCA
Cys
>WENV170973403
MTKY01036158
237479
Alphaproteobacteria
TTT
Lys
>WENV170973331
MTKY01028411
366499
Alphaproteobacteria
GGT
Thr
>WENV170974860
MTKY01078175
366499
Alphaproteobacteria
GGT
Thr
>WENV170973172
MTKY01016849
266073
Alphaproteobacteria
TTT
Lys
>WENV170975150
MTKY01094320
60995
Alphaproteobacteria
TAA
Leu
>WENV170973465
MTKY01042453
413302
Alphaproteobacteria
CCC
Gly
>WENV170973481
MTKY01045148
338287
Alphaproteobacteria
GGT
Thr
>WENV170974431
MTKY01061023
237474
Alphaproteobacteria
CCA
Trp
>WENV170973317
MTKY01026936
154579
Alphaproteobacteria
GTG
His
>WENV170973664
MTKY01050449
254575
Alphaproteobacteria
TTT
Lys
>WENV170974936
MTKY01081483
146915
Alphaproteobacteria
CAT
Met
>WENV170973453
MTKY01041836
411617
Alphaproteobacteria
GCA
Cys
>WENV170973373
MTKY01033798
237198
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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