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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183749247
PPFU01141585
481681
Actinomycetota
CCC
Gly
>WENV183749190
PPFU01133223
201159
Actinomycetota
CAT
Met
>WENV183748278
PPFU01024500
190929
Actinomycetota
GTC
Asp
>WENV183749474
PPFU01174280
190929
Actinomycetota
GTC
Asp
>WENV183749715
PPFU01202641
102100
Actinomycetota
GAG
Leu
>WENV183749456
PPFU01172078
335148
Actinomycetota
CCG
Arg
>WENV183750411
PPFU01298471
180140
Actinomycetota
CAT
Met
>WENV183748553
PPFU01052019
178397
Actinomycetota
GGG
Pro
>WENV183749237
PPFU01140118
316564
Actinomycetota
GGT
Thr
>WENV183750222
PPFU01273705
316564
Actinomycetota
GGT
Thr
>WENV183750154
PPFU01264341
306295
Actinomycetota
CTC
Glu
>WENV183750388
PPFU01295337
330670
Actinomycetota
GTG
His
>WENV183749154
PPFU01127408
76532
Actinomycetota
GAG
Leu
>WENV183749550
PPFU01183700
412280
Actinomycetota
GCC
Gly
>WENV183749670
PPFU01197989
412280
Actinomycetota
GCC
Gly
>WENV183748916
PPFU01097096
281115
Actinomycetota
>WENV183750310
PPFU01285189
182444
Actinomycetota
CGG
Pro
>WENV183748527
PPFU01049691
342383
Actinomycetota
GGC
Ala
>WENV183748775
PPFU01079703
342383
Actinomycetota
GGC
Ala
>WENV183749617
PPFU01191509
342383
Actinomycetota
GGC
Ala
>WENV183750129
PPFU01260330
342383
Actinomycetota
GGC
Ala
>WENV183749766
PPFU01211020
349114
Actinomycetota
GTT
Asn
>WENV183750064
PPFU01252818
191257
Actinomycetota
CGG
Pro
>WENV183749018
PPFU01108525
281404
Actinomycetota
GCC
Gly
>WENV183750352
PPFU01291253
480591
Actinomycetota
CCC
Gly
>WENV183749877
PPFU01224803
280575
Actinomycetota
CTC
Glu
>WENV183748316
PPFU01028225
56126
Actinomycetota
GAG
Leu
>WENV183748211
PPFU01019909
281009
Actinomycetota
TTC
Glu
>WENV183748594
PPFU01057117
308433
Actinomycetota
CCA
Trp
>WENV183749427
PPFU01168778
308433
Actinomycetota
CCA
Trp
>WENV183749104
PPFU01120061
281633
Actinomycetota
CCA
Trp
>WENV183749752
PPFU01208824
291883
Actinomycetota
CGC
Ala
>WENV183749276
PPFU01145766
399007
Actinomycetota
GCA
Cys
>WENV183749101
PPFU01119573
209317
Actinomycetota
CAC
Val
>WENV183750367
PPFU01293716
436761
Actinomycetota
CTG
Gln
>WENV183749733
PPFU01206174
447753
Actinomycetota
CCG
Arg
>WENV183749933
PPFU01234477
329192
Actinomycetota
CGT
Thr
>WENV183748025
PPFU01007282
338463
Actinomycetota
CGT
Thr
>WENV183750517
PPFU01315289
338463
Actinomycetota
CGT
Thr
>WENV183749019
PPFU01108525
480460
Actinomycetota
GCA
Cys
>WENV183749727
PPFU01205255
284585
Actinomycetota
CTT
Lys
>WENV183749325
PPFU01150604
361919
Actinomycetota
TTC
Glu
>WENV183749671
PPFU01197989
498750
Actinomycetota
GCA
Cys
>WENV183749931
PPFU01234210
179086
Actinomycetota
CGC
Ala
>WENV183750033
PPFU01249515
179775
Actinomycetota
GGG
Pro
>WENV183748796
PPFU01082283
99872
Actinomycetota
CAG
Leu
>WENV183749070
PPFU01116169
411361
Actinomycetota
CCG
Arg
>WENV183749331
PPFU01151589
481028
Actinomycetota
TCC
Gly
>WENV183748862
PPFU01090373
301032
Actinomycetota
CAT
Met
>WENV183749871
PPFU01224252
280792
Actinomycetota
CAT
Met
>WENV183748986
PPFU01104399
401146
Actinomycetota
CCG
Arg
>WENV183749200
PPFU01133927
401146
Actinomycetota
CCG
Arg
>WENV183749755
PPFU01209392
399009
Actinomycetota
CTG
Gln
>WENV183750498
PPFU01312792
399009
Actinomycetota
CTG
Gln
>WENV183750203
PPFU01271478
225756
Actinomycetota
CAT
Met
>WENV183748540
PPFU01050838
202703
Actinomycetota
GTC
Asp
>WENV183749590
PPFU01189526
351981
Actinomycetota
GGT
Thr
>WENV183749796
PPFU01214010
351981
Actinomycetota
GGT
Thr
>WENV183750120
PPFU01259685
351981
Actinomycetota
GGT
Thr
>WENV183749587
PPFU01189182
285912
Actinomycetota
TTC
Glu
>WENV183749974
PPFU01241009
301743
Actinomycetota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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