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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
120 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729978
PJTR01000278
146962
Bacteroidota
CAT
Met
>WENV183730102
PJTR01000725
146962
Bacteroidota
CAT
Met
>WENV183730043
PJTR01000403
159146
Bacteroidota
TCG
Arg
>WENV183729695
PJTR01000018
412419
Bacteroidota
CCA
Trp
>WENV183730297
PJTR01017119
147867
Bacteroidota
GTG
His
>WENV183729735
PJTR01000036
145315
Bacteroidota
CAT
Met
>WENV183729767
PJTR01000065
147864
Bacteroidota
TGG
Pro
>WENV183729768
PJTR01000065
147864
Bacteroidota
TGG
Pro
>WENV183729942
PJTR01000221
147864
Bacteroidota
TGG
Pro
>WENV183730083
PJTR01000550
147864
Bacteroidota
TGG
Pro
>WENV183730360
PJTR01032454
147864
Bacteroidota
TGG
Pro
>WENV183730335
PJTR01025244
45276
Bacteroidota
TGA
Ser
>WENV183730327
PJTR01021738
45276
Bacteroidota
TGA
Ser
>WENV183730309
PJTR01018359
45276
Bacteroidota
TGA
Ser
>WENV183729797
PJTR01000081
313065
Bacteroidota
>WENV183730042
PJTR01000390
148243
Bacteroidota
GGC
Ala
>WENV183729982
PJTR01000285
51937
Bacteroidota
TAA
Leu
>WENV183729893
PJTR01000154
51937
Bacteroidota
TAA
Leu
>WENV183730211
PJTR01004974
256428
Bacteroidota
GAA
Phe
>WENV183729685
PJTR01000016
173775
Bacteroidota
GTG
His
>WENV183729790
PJTR01000077
241019
Bacteroidota
CAT
Met
>WENV183729789
PJTR01000077
241019
Bacteroidota
CAT
Met
>WENV183730275
PJTR01012647
235817
Bacteroidota
GAA
Phe
>WENV183729703
PJTR01000021
235817
Bacteroidota
GAA
Phe
>WENV183729702
PJTR01000021
235817
Bacteroidota
GAA
Phe
>WENV183729701
PJTR01000021
235817
Bacteroidota
GAA
Phe
>WENV183730365
PJTR01032629
237606
Bacteroidota
GCC
Gly
>WENV183730032
PJTR01000372
237606
Bacteroidota
GCC
Gly
>WENV183729863
PJTR01000137
237606
Bacteroidota
GCC
Gly
>WENV183730045
PJTR01000415
415980
Bacteroidota
TTG
Gln
>WENV183730044
PJTR01000415
415980
Bacteroidota
TTG
Gln
>WENV183729699
PJTR01000020
267483
Bacteroidota
TGT
Thr
>WENV183730173
PJTR01002041
113741
Bacteroidota
GTA
Tyr
>WENV183730166
PJTR01001736
113741
Bacteroidota
GTA
Tyr
>WENV183730126
PJTR01000967
113741
Bacteroidota
GTA
Tyr
>WENV183730053
PJTR01000423
113741
Bacteroidota
GTA
Tyr
>WENV183729879
PJTR01000144
113741
Bacteroidota
GTA
Tyr
>WENV183730060
PJTR01000449
338625
Bacteroidota
TTC
Glu
>WENV183730028
PJTR01000344
338625
Bacteroidota
TTC
Glu
>WENV183729773
PJTR01000069
338625
Bacteroidota
TTC
Glu
>WENV183729672
PJTR01000008
338625
Bacteroidota
TTC
Glu
>WENV183729671
PJTR01000008
338625
Bacteroidota
TTC
Glu
>WENV183729777
PJTR01000069
95728
Bacteroidota
GTA
Tyr
>WENV183729753
PJTR01000048
95728
Bacteroidota
GTA
Tyr
>WENV183730103
PJTR01000731
182270
Bacteroidota
CAT
Met
>WENV183730150
PJTR01001374
241469
Bacteroidota
GAA
Phe
>WENV183730063
PJTR01000459
241469
Bacteroidota
GAA
Phe
>WENV183730046
PJTR01000417
241469
Bacteroidota
GAA
Phe
>WENV183729967
PJTR01000255
241469
Bacteroidota
GAA
Phe
>WENV183729747
PJTR01000043
417120
Bacteroidota
TTG
Gln
>WENV183729755
PJTR01000048
168744
Bacteroidota
GTG
His
>WENV183730132
PJTR01001081
239858
Bacteroidota
TTT
Lys
>WENV183730086
PJTR01000556
239858
Bacteroidota
TTT
Lys
>WENV183730084
PJTR01000556
239858
Bacteroidota
TTT
Lys
>WENV183729916
PJTR01000185
239858
Bacteroidota
TTT
Lys
>WENV183729914
PJTR01000185
239858
Bacteroidota
TTT
Lys
>WENV183729913
PJTR01000185
239858
Bacteroidota
TTT
Lys
>WENV183730127
PJTR01001046
347983
Bacteroidota
TTC
Glu
>WENV183730027
PJTR01000344
347983
Bacteroidota
TTC
Glu
>WENV183729988
PJTR01000294
347983
Bacteroidota
TTC
Glu
>WENV183729781
PJTR01000071
347983
Bacteroidota
TTC
Glu
>WENV183729780
PJTR01000071
347983
Bacteroidota
TTC
Glu
>WENV183729772
PJTR01000068
191087
Bacteroidota
TCT
Arg
>WENV183729746
PJTR01000043
155147
Bacteroidota
GGC
Ala
>WENV183730221
PJTR01005545
285949
Bacteroidota
GCC
Gly
>WENV183730029
PJTR01000347
159029
Bacteroidota
GTG
His
>WENV183729874
PJTR01000141
159029
Bacteroidota
GTG
His
>WENV183730239
PJTR01006614
412189
Bacteroidota
CCA
Trp
>WENV183730033
PJTR01000379
412189
Bacteroidota
CCA
Trp
>WENV183730008
PJTR01000329
412189
Bacteroidota
CCA
Trp
>WENV183730144
PJTR01001270
413186
Bacteroidota
>WENV183730142
PJTR01001255
413186
Bacteroidota
>WENV183729723
PJTR01000030
238764
Bacteroidota
>WENV183729722
PJTR01000030
238764
Bacteroidota
>WENV183730224
PJTR01005863
127215
Bacteroidota
TAC
Val
>WENV183729861
PJTR01000135
127215
Bacteroidota
TAC
Val
>WENV183729670
PJTR01000008
166091
Bacteroidota
CAT
Met
>WENV183729788
PJTR01000077
238600
Bacteroidota
CAT
Met
>WENV183729694
PJTR01000018
342824
Bacteroidota
GGT
Thr
>WENV183729771
PJTR01000068
143758
Bacteroidota
TGG
Pro
>WENV183729719
PJTR01000029
143758
Bacteroidota
TGG
Pro
>WENV183729860
PJTR01000135
126680
Bacteroidota
TAC
Val
>WENV183730268
PJTR01010323
411719
Bacteroidota
GCA
Cys
>WENV183729837
PJTR01000109
411719
Bacteroidota
GCA
Cys
>WENV183729894
PJTR01000154
54270
Bacteroidota
TGA
Ser
>WENV183729700
PJTR01000020
54270
Bacteroidota
TGA
Ser
>WENV183730021
PJTR01000337
160686
Bacteroidota
CAT
Met
>WENV183729932
PJTR01000196
160686
Bacteroidota
CAT
Met
>WENV183729954
PJTR01000239
25256
Bacteroidota
GCT
Ser
>WENV183729752
PJTR01000046
152147
Bacteroidota
TCT
Arg
>WENV183730146
PJTR01001303
59930
Bacteroidota
GCT
Ser
>WENV183729750
PJTR01000046
59930
Bacteroidota
GCT
Ser
>WENV183730256
PJTR01008073
48896
Bacteroidota
>WENV183730172
PJTR01002041
150454
Bacteroidota
TGT
Thr
>WENV183730165
PJTR01001736
150454
Bacteroidota
TGT
Thr
>WENV183729846
PJTR01000122
150454
Bacteroidota
TGT
Thr
>WENV183729845
PJTR01000122
150454
Bacteroidota
TGT
Thr
>WENV183729784
PJTR01000072
150454
Bacteroidota
TGT
Thr
>WENV183729783
PJTR01000072
150454
Bacteroidota
TGT
Thr
>WENV183729718
PJTR01000029
302196
Bacteroidota
TTT
Lys
>WENV183729716
PJTR01000029
302196
Bacteroidota
TTT
Lys
>WENV183729715
PJTR01000029
302196
Bacteroidota
TTT
Lys
>WENV183729799
PJTR01000082
16286
Bacteroidota
GGA
Ser
>WENV183729691
PJTR01000018
237427
Bacteroidota
TGT
Thr
>WENV183730174
PJTR01002041
360629
Bacteroidota
GGT
Thr
>WENV183730167
PJTR01001736
360629
Bacteroidota
GGT
Thr
>WENV183729778
PJTR01000069
360629
Bacteroidota
GGT
Thr
>WENV183730114
PJTR01000829
96696
Bacteroidota
TAG
Leu
>WENV183730109
PJTR01000764
96696
Bacteroidota
TAG
Leu
>WENV183730094
PJTR01000591
96696
Bacteroidota
TAG
Leu
>WENV183729980
PJTR01000282
96696
Bacteroidota
TAG
Leu
>WENV183730366
PJTR01032629
37199
Bacteroidota
TAA
Leu
>WENV183730204
PJTR01004512
37199
Bacteroidota
TAA
Leu
>WENV183730201
PJTR01004054
37199
Bacteroidota
TAA
Leu
>WENV183730151
PJTR01001374
37199
Bacteroidota
TAA
Leu
>WENV183730064
PJTR01000459
37199
Bacteroidota
TAA
Leu
>WENV183729759
PJTR01000057
45130
Bacteroidota
TGA
Ser
>WENV183729754
PJTR01000048
45130
Bacteroidota
TGA
Ser
>WENV183730085
PJTR01000556
83316
Bacteroidota
GAG
Leu
>WENV183729915
PJTR01000185
83316
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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