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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170792139
MDSV01094834
338634
Gammaproteobacteria
GCC
Gly
>WENV170792268
MDSV01096869
98124
Gammaproteobacteria
GAG
Leu
>WENV170791860
MDSV01089945
183605
Gammaproteobacteria
CCG
Arg
>WENV170791953
MDSV01091616
312287
Gammaproteobacteria
TGT
Thr
>WENV170798322
MDSV01194708
312287
Gammaproteobacteria
TGT
Thr
>WENV170801376
MDSV01245912
312287
Gammaproteobacteria
TGT
Thr
>WENV170791515
MDSV01084567
313881
Gammaproteobacteria
GGC
Ala
>WENV170794050
MDSV01125855
313881
Gammaproteobacteria
GGC
Ala
>WENV170795770
MDSV01153819
313881
Gammaproteobacteria
GGC
Ala
>WENV170797489
MDSV01181252
313881
Gammaproteobacteria
GGC
Ala
>WENV170798223
MDSV01193255
313881
Gammaproteobacteria
GGC
Ala
>WENV170800783
MDSV01236040
313881
Gammaproteobacteria
GGC
Ala
>WENV170801497
MDSV01248035
236030
Gammaproteobacteria
CCA
Trp
>WENV170799601
MDSV01216306
58767
Gammaproteobacteria
CAG
Leu
>WENV170790763
MDSV01071542
146435
Gammaproteobacteria
TGG
Pro
>WENV170792202
MDSV01096076
279385
Gammaproteobacteria
TTT
Lys
>WENV170799090
MDSV01207471
236480
Gammaproteobacteria
GTG
His
>WENV170793925
MDSV01124168
236026
Gammaproteobacteria
GTG
His
>WENV170799431
MDSV01213455
149035
Gammaproteobacteria
CCG
Arg
>WENV170801122
MDSV01241277
290337
Gammaproteobacteria
TAC
Val
>WENV170792533
MDSV01101427
61925
Gammaproteobacteria
TAA
Leu
>WENV170793727
MDSV01121207
61925
Gammaproteobacteria
TAA
Leu
>WENV170797872
MDSV01187736
147053
Gammaproteobacteria
GTT
Asn
>WENV170793397
MDSV01115526
147053
Gammaproteobacteria
GTT
Asn
>WENV170793396
MDSV01115526
147053
Gammaproteobacteria
GTT
Asn
>WENV170786939
MDSV01010798
147053
Gammaproteobacteria
GTT
Asn
>WENV170786834
MDSV01009140
147053
Gammaproteobacteria
GTT
Asn
>WENV170787734
MDSV01022583
241476
Gammaproteobacteria
TTT
Lys
>WENV170788024
MDSV01026517
145260
Gammaproteobacteria
CAT
Met
>WENV170786437
MDSV01003209
171935
Gammaproteobacteria
ACG
Arg
>WENV170791721
MDSV01087782
269248
Gammaproteobacteria
CCA
Trp
>WENV170797578
MDSV01182320
147647
Gammaproteobacteria
CAT
Met
>WENV170788394
MDSV01032871
185163
Gammaproteobacteria
ACG
Arg
>WENV170787275
MDSV01016031
185163
Gammaproteobacteria
ACG
Arg
>WENV170799669
MDSV01217497
185163
Gammaproteobacteria
ACG
Arg
>WENV170794408
MDSV01131801
185163
Gammaproteobacteria
ACG
Arg
>WENV170793253
MDSV01113064
154268
Gammaproteobacteria
ACG
Arg
>WENV170791082
MDSV01076183
154268
Gammaproteobacteria
ACG
Arg
>WENV170787263
MDSV01015889
240642
Gammaproteobacteria
GTT
Asn
>WENV170789307
MDSV01048280
149036
Gammaproteobacteria
CCA
Trp
>WENV170800979
MDSV01239174
149036
Gammaproteobacteria
CCA
Trp
>WENV170800580
MDSV01232574
149036
Gammaproteobacteria
CCA
Trp
>WENV170800523
MDSV01231661
149036
Gammaproteobacteria
CCA
Trp
>WENV170799541
MDSV01215233
149036
Gammaproteobacteria
CCA
Trp
>WENV170793321
MDSV01114196
245602
Gammaproteobacteria
TTT
Lys
>WENV170797453
MDSV01180542
245602
Gammaproteobacteria
TTT
Lys
>WENV170800780
MDSV01235950
146791
Gammaproteobacteria
GAC
Val
>WENV170799583
MDSV01215941
146791
Gammaproteobacteria
GAC
Val
>WENV170791012
MDSV01075024
322642
Gammaproteobacteria
GGT
Thr
>WENV170788850
MDSV01040382
322642
Gammaproteobacteria
GGT
Thr
>WENV170796129
MDSV01159550
322642
Gammaproteobacteria
GGT
Thr
>WENV170790674
MDSV01069960
16453
Gammaproteobacteria
TGA
Ser
>WENV170790518
MDSV01067586
148148
Gammaproteobacteria
GAC
Val
>WENV170786709
MDSV01007375
148148
Gammaproteobacteria
GAC
Val
>WENV170798849
MDSV01203447
145261
Gammaproteobacteria
CAT
Met
>WENV170795803
MDSV01154279
145261
Gammaproteobacteria
CAT
Met
>WENV170790587
MDSV01068607
147122
Gammaproteobacteria
GGG
Pro
>WENV170795453
MDSV01148954
145369
Gammaproteobacteria
CGG
Pro
>WENV170787180
MDSV01014548
69672
Gammaproteobacteria
TAA
Leu
>WENV170786636
MDSV01006388
69672
Gammaproteobacteria
TAA
Leu
>WENV170800694
MDSV01234518
69672
Gammaproteobacteria
TAA
Leu
>WENV170800126
MDSV01224976
69672
Gammaproteobacteria
TAA
Leu
>WENV170798713
MDSV01201136
270709
Gammaproteobacteria
GTG
His
>WENV170792895
MDSV01106959
301232
Gammaproteobacteria
TTC
Glu
>WENV170796254
MDSV01161579
301232
Gammaproteobacteria
TTC
Glu
>WENV170790850
MDSV01072719
16294
Gammaproteobacteria
GGA
Ser
>WENV170797320
MDSV01178448
340801
Gammaproteobacteria
CCT
Arg
>WENV170790673
MDSV01069960
236027
Gammaproteobacteria
GTT
Asn
>WENV170796944
MDSV01172046
236027
Gammaproteobacteria
GTT
Asn
>WENV170793020
MDSV01109139
16394
Gammaproteobacteria
TGA
Ser
>WENV170798865
MDSV01203765
52727
Gammaproteobacteria
GGA
Ser
>WENV170794015
MDSV01125475
289927
Gammaproteobacteria
GAA
Phe
>WENV170786845
MDSV01009310
202944
Gammaproteobacteria
TGG
Pro
>WENV170786310
MDSV01001188
202944
Gammaproteobacteria
TGG
Pro
>WENV170794231
MDSV01128840
202944
Gammaproteobacteria
TGG
Pro
>WENV170799091
MDSV01207471
97031
Gammaproteobacteria
TAG
Leu
>WENV170800304
MDSV01227814
199268
Gammaproteobacteria
ACG
Arg
>WENV170786706
MDSV01007330
260238
Gammaproteobacteria
>WENV170793924
MDSV01124168
145487
Gammaproteobacteria
TCT
Arg
>WENV170796454
MDSV01164313
252289
Gammaproteobacteria
TTT
Lys
>WENV170799092
MDSV01207471
149038
Gammaproteobacteria
TGG
Pro
>WENV170798767
MDSV01201937
149038
Gammaproteobacteria
TGG
Pro
>WENV170795180
MDSV01144056
149038
Gammaproteobacteria
TGG
Pro
>WENV170801621
MDSV01249770
309581
Gammaproteobacteria
GAA
Phe
>WENV170794964
MDSV01140296
145490
Gammaproteobacteria
CAT
Met
>WENV170791382
MDSV01081894
60302
Gammaproteobacteria
TAA
Leu
>WENV170794031
MDSV01125628
319098
Gammaproteobacteria
TAC
Val
>WENV170792725
MDSV01104103
173040
Gammaproteobacteria
GAC
Val
>WENV170792502
MDSV01100819
173040
Gammaproteobacteria
GAC
Val
>WENV170791089
MDSV01076396
173040
Gammaproteobacteria
GAC
Val
>WENV170786656
MDSV01006724
173040
Gammaproteobacteria
GAC
Val
>WENV170800207
MDSV01226184
173040
Gammaproteobacteria
GAC
Val
>WENV170797923
MDSV01188589
173040
Gammaproteobacteria
GAC
Val
>WENV170786436
MDSV01003209
23442
Gammaproteobacteria
GCT
Ser
>WENV170790165
MDSV01061670
99961
Gammaproteobacteria
GAG
Leu
>WENV170787557
MDSV01020057
341782
Gammaproteobacteria
TTG
Gln
>WENV170790182
MDSV01061906
77137
Gammaproteobacteria
TAA
Leu
>WENV170795381
MDSV01147748
77137
Gammaproteobacteria
TAA
Leu
>WENV170788073
MDSV01027242
145713
Gammaproteobacteria
CAT
Met
>WENV170794954
MDSV01140210
145713
Gammaproteobacteria
CAT
Met
>WENV170790574
MDSV01068392
128930
Gammaproteobacteria
GTC
Asp
>WENV170790164
MDSV01061670
128930
Gammaproteobacteria
GTC
Asp
>WENV170789878
MDSV01056935
128930
Gammaproteobacteria
GTC
Asp
>WENV170795189
MDSV01144236
243921
Gammaproteobacteria
TTT
Lys
>WENV170792651
MDSV01103176
59658
Gammaproteobacteria
CAA
Leu
>WENV170786918
MDSV01010432
237438
Gammaproteobacteria
GAA
Phe
>WENV170793005
MDSV01108779
203054
Gammaproteobacteria
ACG
Arg
>WENV170797679
MDSV01184272
247088
Gammaproteobacteria
CCA
Trp
>WENV170787334
MDSV01016977
149037
Gammaproteobacteria
GAC
Val
>WENV170787192
MDSV01014741
149037
Gammaproteobacteria
GAC
Val
>WENV170790865
MDSV01072904
198797
Gammaproteobacteria
TGG
Pro
>WENV170786659
MDSV01006761
198797
Gammaproteobacteria
TGG
Pro
>WENV170797345
MDSV01178863
241212
Gammaproteobacteria
GTG
His
>WENV170794074
MDSV01126264
150183
Gammaproteobacteria
CCG
Arg
>WENV170800417
MDSV01229780
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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