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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180619941
OCQB01017747
24650
Bacillota
TAA
Leu
>WENV180619542
OCQB01005559
196621
Bacillota
GTC
Asp
>WENV180619697
OCQB01009134
196621
Bacillota
GTC
Asp
>WENV180620222
OCQB01042133
155958
Bacillota
GAT
Ile
>WENV180620290
OCQB01051666
155958
Bacillota
GAT
Ile
>WENV180619777
OCQB01011631
309417
Bacillota
GGC
Ala
>WENV180620074
OCQB01026998
309417
Bacillota
GGC
Ala
>WENV180620122
OCQB01030884
309417
Bacillota
GGC
Ala
>WENV180618262
OCQB01000020
352996
Bacillota
TTC
Glu
>WENV180618998
OCQB01001042
37213
Bacillota
TGA
Ser
>WENV180619663
OCQB01008224
144612
Bacillota
TCT
Arg
>WENV180619015
OCQB01001090
144612
Bacillota
TCT
Arg
>WENV180618424
OCQB01000106
154063
Bacillota
CGG
Pro
>WENV180618530
OCQB01000201
267649
Bacillota
TAC
Val
>WENV180618411
OCQB01000101
267649
Bacillota
TAC
Val
>WENV180618497
OCQB01000172
235134
Bacillota
GAA
Phe
>WENV180620320
OCQB01056659
235098
Bacillota
GAC
Val
>WENV180619692
OCQB01009097
235098
Bacillota
GAC
Val
>WENV180619248
OCQB01002445
235098
Bacillota
GAC
Val
>WENV180620515
OCQB01106925
338152
Bacillota
TTC
Glu
>WENV180620505
OCQB01104336
338152
Bacillota
TTC
Glu
>WENV180619008
OCQB01001055
338152
Bacillota
TTC
Glu
>WENV180618851
OCQB01000650
44854
Bacillota
TGA
Ser
>WENV180620119
OCQB01030292
235154
Bacillota
GTT
Asn
>WENV180620129
OCQB01031360
144577
Bacillota
GAT
Ile
>WENV180619933
OCQB01017186
144577
Bacillota
GAT
Ile
>WENV180620466
OCQB01089560
304022
Bacillota
GCC
Gly
>WENV180620255
OCQB01046960
304022
Bacillota
GCC
Gly
>WENV180619840
OCQB01013323
304022
Bacillota
GCC
Gly
>WENV180619466
OCQB01004438
304022
Bacillota
GCC
Gly
>WENV180619142
OCQB01001690
304022
Bacillota
GCC
Gly
>WENV180619821
OCQB01012703
307003
Bacillota
TGC
Ala
>WENV180619762
OCQB01010920
307003
Bacillota
TGC
Ala
>WENV180620488
OCQB01099319
238910
Bacillota
CTT
Lys
>WENV180620158
OCQB01034161
338147
Bacillota
CTC
Glu
>WENV180620157
OCQB01034101
235150
Bacillota
TGC
Ala
>WENV180618711
OCQB01000416
155273
Bacillota
CAT
Met
>WENV180620549
OCQB01119788
235137
Bacillota
TGC
Ala
>WENV180620707
OCQB01266358
281701
Bacillota
TGC
Ala
>WENV180620667
OCQB01197802
388249
Bacillota
GCA
Cys
>WENV180620740
OCQB01280757
429429
Bacillota
CCA
Trp
>WENV180618433
OCQB01000115
429429
Bacillota
CCA
Trp
>WENV180620728
OCQB01277944
169927
Bacillota
GTC
Asp
>WENV180618803
OCQB01000557
313454
Bacillota
GAA
Phe
>WENV180618188
OCQB01000003
313454
Bacillota
GAA
Phe
>WENV180619604
OCQB01006841
41154
Bacillota
TAA
Leu
>WENV180620266
OCQB01048318
44859
Bacillota
AAG
Leu
>WENV180619397
OCQB01003671
11034
Bacillota
GGA
Ser
>WENV180620463
OCQB01089560
235117
Bacillota
TAC
Val
>WENV180618826
OCQB01000584
274189
Bacillota
TGT
Thr
>WENV180620465
OCQB01089560
235079
Bacillota
GAA
Phe
>WENV180620426
OCQB01075849
235079
Bacillota
GAA
Phe
>WENV180619558
OCQB01005738
235079
Bacillota
GAA
Phe
>WENV180618819
OCQB01000574
235079
Bacillota
GAA
Phe
>WENV180620477
OCQB01095612
412338
Bacillota
GCA
Cys
>WENV180620710
OCQB01272414
235087
Bacillota
TGC
Ala
>WENV180620243
OCQB01044579
173314
Bacillota
GAT
Ile
>WENV180620131
OCQB01031586
173314
Bacillota
GAT
Ile
>WENV180620304
OCQB01055284
316443
Bacillota
GTC
Asp
>WENV180619288
OCQB01002726
338149
Bacillota
CTC
Glu
>WENV180618800
OCQB01000552
271471
Bacillota
GCC
Gly
>WENV180618235
OCQB01000014
271471
Bacillota
GCC
Gly
>WENV180619959
OCQB01018988
245298
Bacillota
CGG
Pro
>WENV180619727
OCQB01009960
245298
Bacillota
CGG
Pro
>WENV180620504
OCQB01104336
287000
Bacillota
GTT
Asn
>WENV180618187
OCQB01000003
169968
Bacillota
CAT
Met
>WENV180619889
OCQB01015192
162445
Bacillota
CAT
Met
>WENV180619238
OCQB01002309
162445
Bacillota
CAT
Met
>WENV180620346
OCQB01061327
201704
Bacillota
GAT
Ile
>WENV180619011
OCQB01001059
152492
Bacillota
GGG
Pro
>WENV180618939
OCQB01000856
100326
Bacillota
GTA
Tyr
>WENV180620669
OCQB01199500
144610
Bacillota
GTG
His
>WENV180619159
OCQB01001793
144610
Bacillota
GTG
His
>WENV180620326
OCQB01057175
411547
Bacillota
CTG
Gln
>WENV180619726
OCQB01009960
411547
Bacillota
CTG
Gln
>WENV180619503
OCQB01004912
411547
Bacillota
CTG
Gln
>WENV180618852
OCQB01000650
4624
Bacillota
GCT
Ser
>WENV180619195
OCQB01001953
263765
Bacillota
TAC
Val
>WENV180618753
OCQB01000496
263765
Bacillota
TAC
Val
>WENV180618644
OCQB01000324
263765
Bacillota
TAC
Val
>WENV180619764
OCQB01011006
412387
Bacillota
GCA
Cys
>WENV180618495
OCQB01000172
313104
Bacillota
TAC
Val
>WENV180620414
OCQB01073467
313164
Bacillota
TTT
Lys
>WENV180619309
OCQB01002844
313164
Bacillota
TTT
Lys
>WENV180619698
OCQB01009134
235095
Bacillota
GGT
Thr
>WENV180619695
OCQB01009134
235095
Bacillota
GGT
Thr
>WENV180619543
OCQB01005559
235095
Bacillota
GGT
Thr
>WENV180619427
OCQB01003880
411549
Bacillota
TTG
Gln
>WENV180620556
OCQB01121390
235877
Bacillota
TGC
Ala
>WENV180619623
OCQB01007297
59296
Bacillota
AAG
Leu
>WENV180620592
OCQB01133581
148188
Bacillota
CCG
Arg
>WENV180620149
OCQB01033664
148188
Bacillota
CCG
Arg
>WENV180619480
OCQB01004618
148188
Bacillota
CCG
Arg
>WENV180619914
OCQB01016551
80612
Bacillota
GTA
Tyr
>WENV180619096
OCQB01001411
235127
Bacillota
TTT
Lys
>WENV180619785
OCQB01012045
163943
Bacillota
GTC
Asp
>WENV180618730
OCQB01000454
163943
Bacillota
GTC
Asp
>WENV180620306
OCQB01055284
113225
Bacillota
TAG
Leu
>WENV180620507
OCQB01104339
298620
Bacillota
CAT
Met
>WENV180620730
OCQB01280216
241432
Bacillota
TGT
Thr
>WENV180619373
OCQB01003374
235124
Bacillota
TGG
Pro
>WENV180620322
OCQB01057040
345314
Bacillota
TTG
Gln
>WENV180620622
OCQB01151109
338129
Bacillota
TGT
Thr
>WENV180619699
OCQB01009213
338129
Bacillota
TGT
Thr
>WENV180619363
OCQB01003263
157838
Bacillota
GTC
Asp
>WENV180618807
OCQB01000562
157838
Bacillota
GTC
Asp
>WENV180618254
OCQB01000018
157838
Bacillota
GTC
Asp
>WENV180620541
OCQB01115964
144583
Bacillota
ACG
Arg
>WENV180619714
OCQB01009527
247734
Bacillota
TGC
Ala
>WENV180619541
OCQB01005559
235171
Bacillota
CCA
Trp
>WENV180619289
OCQB01002726
144621
Bacillota
GTT
Asn
>WENV180620200
OCQB01039066
235113
Bacillota
GAA
Phe
>WENV180620168
OCQB01035124
58712
Bacillota
CAG
Leu
>WENV180619593
OCQB01006513
58712
Bacillota
CAG
Leu
>WENV180619495
OCQB01004743
58712
Bacillota
CAG
Leu
>WENV180620516
OCQB01107715
21693
Bacillota
GCT
Ser
>WENV180619103
OCQB01001442
21693
Bacillota
GCT
Ser
>WENV180619968
OCQB01019519
245296
Bacillota
CCC
Gly
>WENV180620043
OCQB01024462
272992
Bacillota
CTT
Lys
>WENV180618992
OCQB01001027
272992
Bacillota
CTT
Lys
>WENV180620135
OCQB01032140
198135
Bacillota
GAT
Ile
>WENV180620130
OCQB01031586
299139
Bacillota
TGC
Ala
>WENV180619566
OCQB01005861
144594
Bacillota
CAC
Val
>WENV180619284
OCQB01002716
144594
Bacillota
CAC
Val
>WENV180619899
OCQB01015501
272488
Bacillota
GAA
Phe
>WENV180620170
OCQB01035303
292012
Bacillota
TGC
Ala
>WENV180618253
OCQB01000018
263523
Bacillota
TAC
Val
>WENV180619679
OCQB01008510
338128
Bacillota
TTC
Glu
>WENV180619654
OCQB01007926
338128
Bacillota
TTC
Glu
>WENV180618399
OCQB01000093
338128
Bacillota
TTC
Glu
>WENV180620580
OCQB01128001
159264
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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