This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
174 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180715798
ODFW01048752
37528
Bacillota
AAG
Leu
>WENV180715487
ODFW01010580
155958
Bacillota
GAT
Ile
>WENV180715045
ODFW01002068
158247
Bacillota
>WENV180714412
ODFW01000091
144612
Bacillota
TCT
Arg
>WENV180715743
ODFW01038500
144612
Bacillota
TCT
Arg
>WENV180714873
ODFW01001100
235134
Bacillota
GAA
Phe
>WENV180715954
ODFW01106131
267556
Bacillota
TAC
Val
>WENV180715581
ODFW01016235
156189
Bacillota
GAT
Ile
>WENV180715903
ODFW01076337
235098
Bacillota
GAC
Val
>WENV180715772
ODFW01044260
235098
Bacillota
GAC
Val
>WENV180715683
ODFW01029051
235098
Bacillota
GAC
Val
>WENV180714955
ODFW01001514
235098
Bacillota
GAC
Val
>WENV180714949
ODFW01001492
235098
Bacillota
GAC
Val
>WENV180715713
ODFW01033196
254900
Bacillota
TTT
Lys
>WENV180715974
ODFW01117655
16438
Bacillota
GGA
Ser
>WENV180714871
ODFW01001100
261586
Bacillota
TAC
Val
>WENV180714617
ODFW01000352
148239
Bacillota
TCT
Arg
>WENV180715151
ODFW01002749
44854
Bacillota
TGA
Ser
>WENV180715460
ODFW01009305
235154
Bacillota
GTT
Asn
>WENV180715720
ODFW01035035
144577
Bacillota
GAT
Ile
>WENV180714936
ODFW01001414
37071
Bacillota
TGA
Ser
>WENV180714367
ODFW01000058
37071
Bacillota
TGA
Ser
>WENV180714326
ODFW01000027
37071
Bacillota
TGA
Ser
>WENV180714567
ODFW01000268
59312
Bacillota
CAG
Leu
>WENV180715857
ODFW01060875
238910
Bacillota
CTT
Lys
>WENV180715689
ODFW01030335
338147
Bacillota
CTC
Glu
>WENV180714922
ODFW01001297
338147
Bacillota
CTC
Glu
>WENV180714456
ODFW01000140
338147
Bacillota
CTC
Glu
>WENV180714403
ODFW01000078
338147
Bacillota
CTC
Glu
>WENV180715827
ODFW01053907
235150
Bacillota
TGC
Ala
>WENV180715821
ODFW01052714
235150
Bacillota
TGC
Ala
>WENV180715727
ODFW01035886
235137
Bacillota
TGC
Ala
>WENV180715193
ODFW01003048
340802
Bacillota
TTG
Gln
>WENV180714759
ODFW01000672
235114
Bacillota
TTT
Lys
>WENV180715887
ODFW01070322
144668
Bacillota
GTC
Asp
>WENV180716120
ODFW01223668
182792
Bacillota
GTC
Asp
>WENV180716103
ODFW01220383
182792
Bacillota
GTC
Asp
>WENV180715915
ODFW01079705
182792
Bacillota
GTC
Asp
>WENV180714484
ODFW01000166
182792
Bacillota
GTC
Asp
>WENV180716032
ODFW01161353
243227
Bacillota
GTT
Asn
>WENV180714634
ODFW01000366
44859
Bacillota
AAG
Leu
>WENV180714566
ODFW01000268
44859
Bacillota
AAG
Leu
>WENV180715632
ODFW01022401
11034
Bacillota
GGA
Ser
>WENV180716102
ODFW01220342
235117
Bacillota
TAC
Val
>WENV180715914
ODFW01079705
235117
Bacillota
TAC
Val
>WENV180715803
ODFW01049687
152125
Bacillota
GTT
Asn
>WENV180714618
ODFW01000352
156937
Bacillota
GTG
His
>WENV180714895
ODFW01001164
274189
Bacillota
TGT
Thr
>WENV180714438
ODFW01000121
274189
Bacillota
TGT
Thr
>WENV180716118
ODFW01223666
235079
Bacillota
GAA
Phe
>WENV180716096
ODFW01219533
235079
Bacillota
GAA
Phe
>WENV180715977
ODFW01118041
235079
Bacillota
GAA
Phe
>WENV180715124
ODFW01002529
235079
Bacillota
GAA
Phe
>WENV180714962
ODFW01001536
235079
Bacillota
GAA
Phe
>WENV180715892
ODFW01073249
16266
Bacillota
GCT
Ser
>WENV180715848
ODFW01059494
412338
Bacillota
GCA
Cys
>WENV180716085
ODFW01215475
235087
Bacillota
TGC
Ala
>WENV180715341
ODFW01005822
173314
Bacillota
GAT
Ile
>WENV180716090
ODFW01219126
338149
Bacillota
CTC
Glu
>WENV180715591
ODFW01017332
338149
Bacillota
CTC
Glu
>WENV180714334
ODFW01000030
271471
Bacillota
GCC
Gly
>WENV180714341
ODFW01000035
245298
Bacillota
CGG
Pro
>WENV180715067
ODFW01002165
37269
Bacillota
TGA
Ser
>WENV180716069
ODFW01196329
287000
Bacillota
GTT
Asn
>WENV180715878
ODFW01067294
287000
Bacillota
GTT
Asn
>WENV180715926
ODFW01085042
169968
Bacillota
CAT
Met
>WENV180715450
ODFW01008923
169968
Bacillota
CAT
Met
>WENV180714577
ODFW01000282
413152
Bacillota
TCC
Gly
>WENV180715951
ODFW01104817
100326
Bacillota
GTA
Tyr
>WENV180715279
ODFW01004586
100326
Bacillota
GTA
Tyr
>WENV180716089
ODFW01219084
144610
Bacillota
GTG
His
>WENV180715192
ODFW01003048
144610
Bacillota
GTG
His
>WENV180715016
ODFW01001911
144610
Bacillota
GTG
His
>WENV180715847
ODFW01058971
240017
Bacillota
GCC
Gly
>WENV180716119
ODFW01223667
411547
Bacillota
CTG
Gln
>WENV180715746
ODFW01039146
411547
Bacillota
CTG
Gln
>WENV180715379
ODFW01006874
411547
Bacillota
CTG
Gln
>WENV180715138
ODFW01002656
411547
Bacillota
CTG
Gln
>WENV180714340
ODFW01000035
411547
Bacillota
CTG
Gln
>WENV180715152
ODFW01002749
4624
Bacillota
GCT
Ser
>WENV180715014
ODFW01001887
263765
Bacillota
TAC
Val
>WENV180714331
ODFW01000030
263765
Bacillota
TAC
Val
>WENV180715972
ODFW01116492
235095
Bacillota
GGT
Thr
>WENV180714723
ODFW01000585
235095
Bacillota
GGT
Thr
>WENV180714485
ODFW01000166
235095
Bacillota
GGT
Thr
>WENV180714483
ODFW01000166
235095
Bacillota
GGT
Thr
>WENV180715085
ODFW01002267
185292
Bacillota
ACG
Arg
>WENV180715383
ODFW01007023
419639
Bacillota
GCA
Cys
>WENV180715331
ODFW01005626
411549
Bacillota
TTG
Gln
>WENV180714979
ODFW01001706
411549
Bacillota
TTG
Gln
>WENV180715455
ODFW01009109
235877
Bacillota
TGC
Ala
>WENV180714779
ODFW01000765
235142
Bacillota
CTT
Lys
>WENV180714319
ODFW01000027
235142
Bacillota
CTT
Lys
>WENV180715860
ODFW01060875
245386
Bacillota
CCA
Trp
>WENV180715802
ODFW01049611
148188
Bacillota
CCG
Arg
>WENV180715310
ODFW01005201
148188
Bacillota
CCG
Arg
>WENV180715144
ODFW01002720
148188
Bacillota
CCG
Arg
>WENV180715919
ODFW01081899
80612
Bacillota
GTA
Tyr
>WENV180715361
ODFW01006248
80612
Bacillota
GTA
Tyr
>WENV180715202
ODFW01003220
256380
Bacillota
>WENV180714749
ODFW01000662
256380
Bacillota
>WENV180714716
ODFW01000578
235127
Bacillota
TTT
Lys
>WENV180714590
ODFW01000303
235127
Bacillota
TTT
Lys
>WENV180714713
ODFW01000578
147674
Bacillota
TCT
Arg
>WENV180714816
ODFW01000886
163943
Bacillota
GTC
Asp
>WENV180714592
ODFW01000304
163943
Bacillota
GTC
Asp
>WENV180715538
ODFW01013083
235124
Bacillota
TGG
Pro
>WENV180715471
ODFW01009744
235124
Bacillota
TGG
Pro
>WENV180714532
ODFW01000213
345314
Bacillota
TTG
Gln
>WENV180716113
ODFW01223438
338129
Bacillota
TGT
Thr
>WENV180715836
ODFW01056616
338129
Bacillota
TGT
Thr
>WENV180715096
ODFW01002320
338129
Bacillota
TGT
Thr
>WENV180714891
ODFW01001148
144583
Bacillota
ACG
Arg
>WENV180716011
ODFW01138747
144652
Bacillota
GTC
Asp
>WENV180715446
ODFW01008923
144652
Bacillota
GTC
Asp
>WENV180714958
ODFW01001532
144652
Bacillota
GTC
Asp
>WENV180714753
ODFW01000672
144652
Bacillota
GTC
Asp
>WENV180714733
ODFW01000639
144652
Bacillota
GTC
Asp
>WENV180715935
ODFW01089828
247734
Bacillota
TGC
Ala
>WENV180715990
ODFW01125410
235171
Bacillota
CCA
Trp
>WENV180715201
ODFW01003210
235171
Bacillota
CCA
Trp
>WENV180715161
ODFW01002863
341971
Bacillota
GCC
Gly
>WENV180715953
ODFW01104817
238974
Bacillota
GAA
Phe
>WENV180715515
ODFW01011448
238974
Bacillota
GAA
Phe
>WENV180715488
ODFW01010619
238974
Bacillota
GAA
Phe
>WENV180715281
ODFW01004586
238974
Bacillota
GAA
Phe
>WENV180715978
ODFW01118044
144621
Bacillota
GTT
Asn
>WENV180715763
ODFW01042536
144621
Bacillota
GTT
Asn
>WENV180715592
ODFW01017332
144621
Bacillota
GTT
Asn
>WENV180715283
ODFW01004604
144621
Bacillota
GTT
Asn
>WENV180714758
ODFW01000672
235113
Bacillota
GAA
Phe
>WENV180714364
ODFW01000058
235113
Bacillota
GAA
Phe
>WENV180715255
ODFW01004131
277200
Bacillota
GGC
Ala
>WENV180715877
ODFW01066629
58712
Bacillota
CAG
Leu
>WENV180715557
ODFW01014695
58712
Bacillota
CAG
Leu
>WENV180715254
ODFW01004097
58712
Bacillota
CAG
Leu
>WENV180714900
ODFW01001179
58712
Bacillota
CAG
Leu
>WENV180714704
ODFW01000548
58712
Bacillota
CAG
Leu
>WENV180714656
ODFW01000430
245296
Bacillota
CCC
Gly
>WENV180715666
ODFW01026302
272992
Bacillota
CTT
Lys
>WENV180715607
ODFW01018566
272992
Bacillota
CTT
Lys
>WENV180715546
ODFW01013628
272992
Bacillota
CTT
Lys
>WENV180715382
ODFW01007023
344240
Bacillota
GCC
Gly
>WENV180714652
ODFW01000428
248965
Bacillota
GCC
Gly
>WENV180714562
ODFW01000261
248965
Bacillota
GCC
Gly
>WENV180715597
ODFW01017603
242686
Bacillota
TGC
Ala
>WENV180715795
ODFW01048333
144594
Bacillota
CAC
Val
>WENV180715523
ODFW01011934
144594
Bacillota
CAC
Val
>WENV180714486
ODFW01000166
144594
Bacillota
CAC
Val
>WENV180714455
ODFW01000140
95563
Bacillota
GTA
Tyr
>WENV180714756
ODFW01000672
95563
Bacillota
GTA
Tyr
>WENV180715606
ODFW01018538
272488
Bacillota
GAA
Phe
>WENV180715451
ODFW01008923
272488
Bacillota
GAA
Phe
>WENV180714989
ODFW01001758
272488
Bacillota
GAA
Phe
>WENV180714899
ODFW01001175
272488
Bacillota
GAA
Phe
>WENV180714720
ODFW01000580
272488
Bacillota
GAA
Phe
>WENV180714589
ODFW01000303
272488
Bacillota
GAA
Phe
>WENV180714986
ODFW01001751
238945
Bacillota
GCC
Gly
>WENV180714671
ODFW01000477
238945
Bacillota
GCC
Gly
>WENV180715734
ODFW01037797
147496
Bacillota
TCT
Arg
>WENV180716117
ODFW01223627
249259
Bacillota
GCC
Gly
>WENV180715932
ODFW01088924
249259
Bacillota
GCC
Gly
>WENV180715913
ODFW01079705
249259
Bacillota
GCC
Gly
>WENV180715886
ODFW01069941
249259
Bacillota
GCC
Gly
>WENV180715806
ODFW01050335
249259
Bacillota
GCC
Gly
>WENV180715265
ODFW01004247
249259
Bacillota
GCC
Gly
>WENV180714963
ODFW01001536
249259
Bacillota
GCC
Gly
>WENV180715432
ODFW01008189
238857
Bacillota
CCA
Trp
>WENV180715725
ODFW01035658
273862
Bacillota
TGC
Ala
>WENV180715435
ODFW01008362
273862
Bacillota
TGC
Ala
>WENV180715340
ODFW01005822
273862
Bacillota
TGC
Ala
>WENV180714907
ODFW01001224
338128
Bacillota
TTC
Glu
>WENV180714731
ODFW01000633
338128
Bacillota
TTC
Glu
>WENV180715305
ODFW01005037
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK