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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183748033
PPFU01007716
4672
Actinomycetota
GCT
Ser
>WENV183748182
PPFU01017167
266918
Actinomycetota
GCC
Gly
>WENV183748278
PPFU01024500
158275
Actinomycetota
GTC
Asp
>WENV183748316
PPFU01028225
47989
Actinomycetota
GAG
Leu
>WENV183748500
PPFU01045962
235444
Actinomycetota
TGC
Ala
>WENV183748527
PPFU01049691
289919
Actinomycetota
GGC
Ala
>WENV183748540
PPFU01050838
175774
Actinomycetota
GTC
Asp
>WENV183748553
PPFU01052019
145633
Actinomycetota
GGG
Pro
>WENV183748561
PPFU01053033
277211
Actinomycetota
TTC
Glu
>WENV183748594
PPFU01057117
269372
Actinomycetota
CCA
Trp
>WENV183748764
PPFU01077328
242813
Actinomycetota
ACG
Arg
>WENV183748774
PPFU01078862
246789
Actinomycetota
CCT
Arg
>WENV183748775
PPFU01079703
289919
Actinomycetota
GGC
Ala
>WENV183748792
PPFU01081941
266896
Actinomycetota
GTT
Asn
>WENV183748796
PPFU01082283
91637
Actinomycetota
CAG
Leu
>WENV183748850
PPFU01088452
391923
Actinomycetota
CCG
Arg
>WENV183748862
PPFU01090373
253739
Actinomycetota
CAT
Met
>WENV183748916
PPFU01097096
235734
Actinomycetota
>WENV183748918
PPFU01097302
179547
Actinomycetota
GGG
Pro
>WENV183748949
PPFU01101097
237121
Actinomycetota
TTT
Lys
>WENV183749018
PPFU01108525
235999
Actinomycetota
GCC
Gly
>WENV183749019
PPFU01108525
411681
Actinomycetota
GCA
Cys
>WENV183749101
PPFU01119573
174437
Actinomycetota
CAC
Val
>WENV183749104
PPFU01120061
236214
Actinomycetota
CCA
Trp
>WENV183749113
PPFU01121126
179547
Actinomycetota
GGG
Pro
>WENV183749154
PPFU01127408
61791
Actinomycetota
GAG
Leu
>WENV183749237
PPFU01140118
267445
Actinomycetota
GGT
Thr
>WENV183749247
PPFU01141585
412802
Actinomycetota
CCC
Gly
>WENV183749276
PPFU01145766
338295
Actinomycetota
GCA
Cys
>WENV183749331
PPFU01151589
419087
Actinomycetota
TCC
Gly
>WENV183749342
PPFU01152706
45767
Actinomycetota
GGA
Ser
>WENV183749474
PPFU01174280
158275
Actinomycetota
GTC
Asp
>WENV183749550
PPFU01183700
360119
Actinomycetota
GCC
Gly
>WENV183749590
PPFU01189526
237445
Actinomycetota
GGT
Thr
>WENV183749617
PPFU01191509
289919
Actinomycetota
GGC
Ala
>WENV183749670
PPFU01197989
360119
Actinomycetota
GCC
Gly
>WENV183749671
PPFU01197989
425058
Actinomycetota
GCA
Cys
>WENV183749698
PPFU01200734
255841
Actinomycetota
CCA
Trp
>WENV183749727
PPFU01205255
238933
Actinomycetota
CTT
Lys
>WENV183749733
PPFU01206174
390230
Actinomycetota
CCG
Arg
>WENV183749752
PPFU01208824
251343
Actinomycetota
CGC
Ala
>WENV183749755
PPFU01209392
338297
Actinomycetota
CTG
Gln
>WENV183749796
PPFU01214010
305589
Actinomycetota
GGT
Thr
>WENV183749857
PPFU01222597
307646
Actinomycetota
ACG
Arg
>WENV183749871
PPFU01224252
236213
Actinomycetota
CAT
Met
>WENV183749877
PPFU01224803
235225
Actinomycetota
CTC
Glu
>WENV183749931
PPFU01234210
148204
Actinomycetota
CGC
Ala
>WENV183749959
PPFU01237756
412084
Actinomycetota
CCC
Gly
>WENV183749969
PPFU01239118
163880
Actinomycetota
CGG
Pro
>WENV183749974
PPFU01241009
254375
Actinomycetota
GGT
Thr
>WENV183750032
PPFU01249436
73605
Actinomycetota
CAG
Leu
>WENV183750033
PPFU01249515
148207
Actinomycetota
GGG
Pro
>WENV183750054
PPFU01252345
174149
Actinomycetota
GAT
Ile
>WENV183750064
PPFU01252818
185606
Actinomycetota
CGG
Pro
>WENV183750091
PPFU01255222
174149
Actinomycetota
GAT
Ile
>WENV183750120
PPFU01259685
305589
Actinomycetota
GGT
Thr
>WENV183750129
PPFU01260330
289919
Actinomycetota
GGC
Ala
>WENV183750154
PPFU01264341
313723
Actinomycetota
CTC
Glu
>WENV183750192
PPFU01269964
179547
Actinomycetota
GGG
Pro
>WENV183750222
PPFU01273705
267445
Actinomycetota
GGT
Thr
>WENV183750290
PPFU01282508
266896
Actinomycetota
GTT
Asn
>WENV183750388
PPFU01295337
279822
Actinomycetota
GTG
His
>WENV183750498
PPFU01312792
338297
Actinomycetota
CTG
Gln
>WENV183750501
PPFU01313180
174149
Actinomycetota
GAT
Ile
>WENV183750526
PPFU01316546
254375
Actinomycetota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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