This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183733711
PJTY01014039
349303
Alphaproteobacteria
GCC
Gly
>WENV183733251
PJTY01000502
426418
Alphaproteobacteria
CTG
Gln
>WENV183733725
PJTY01016530
365250
Alphaproteobacteria
GCC
Gly
>WENV183732985
PJTY01000012
412798
Alphaproteobacteria
CTG
Gln
>WENV183733204
PJTY01000259
24760
Alphaproteobacteria
TGA
Ser
>WENV183733306
PJTY01000828
268154
Alphaproteobacteria
TGT
Thr
>WENV183733044
PJTY01000028
29895
Alphaproteobacteria
TGA
Ser
>WENV183733257
PJTY01000519
146819
Alphaproteobacteria
TTT
Lys
>WENV183733034
PJTY01000026
58865
Alphaproteobacteria
GAG
Leu
>WENV183733122
PJTY01000087
237489
Alphaproteobacteria
CAT
Met
>WENV183733009
PJTY01000017
237489
Alphaproteobacteria
CAT
Met
>WENV183733134
PJTY01000105
241021
Alphaproteobacteria
GGC
Ala
>WENV183733120
PJTY01000081
241021
Alphaproteobacteria
GGC
Ala
>WENV183733110
PJTY01000077
241021
Alphaproteobacteria
GGC
Ala
>WENV183732966
PJTY01000009
241021
Alphaproteobacteria
GGC
Ala
>WENV183732965
PJTY01000009
241021
Alphaproteobacteria
GGC
Ala
>WENV183732959
PJTY01000008
193550
Alphaproteobacteria
TCT
Arg
>WENV183733532
PJTY01003747
147152
Alphaproteobacteria
ACG
Arg
>WENV183733531
PJTY01003747
147152
Alphaproteobacteria
ACG
Arg
>WENV183733042
PJTY01000028
147152
Alphaproteobacteria
ACG
Arg
>WENV183733041
PJTY01000028
147152
Alphaproteobacteria
ACG
Arg
>WENV183733686
PJTY01011504
144964
Alphaproteobacteria
TGG
Pro
>WENV183732955
PJTY01000007
81064
Alphaproteobacteria
GTA
Tyr
>WENV183733090
PJTY01000057
191197
Alphaproteobacteria
CCG
Arg
>WENV183733280
PJTY01000662
375044
Alphaproteobacteria
GCC
Gly
>WENV183733176
PJTY01000212
375044
Alphaproteobacteria
GCC
Gly
>WENV183733175
PJTY01000212
375044
Alphaproteobacteria
GCC
Gly
>WENV183732921
PJTY01000001
375044
Alphaproteobacteria
GCC
Gly
>WENV183733535
PJTY01003816
23605
Alphaproteobacteria
CGA
Ser
>WENV183733003
PJTY01000017
146875
Alphaproteobacteria
GTG
His
>WENV183732964
PJTY01000009
146683
Alphaproteobacteria
GTG
His
>WENV183732918
PJTY01000001
256971
Alphaproteobacteria
TGT
Thr
>WENV183733621
PJTY01007508
23561
Alphaproteobacteria
GGA
Ser
>WENV183733624
PJTY01007760
338282
Alphaproteobacteria
GTT
Asn
>WENV183733309
PJTY01000834
368245
Alphaproteobacteria
>WENV183733028
PJTY01000022
368245
Alphaproteobacteria
>WENV183732944
PJTY01000004
368245
Alphaproteobacteria
>WENV183733031
PJTY01000024
165860
Alphaproteobacteria
TGG
Pro
>WENV183733010
PJTY01000017
165860
Alphaproteobacteria
TGG
Pro
>WENV183733131
PJTY01000103
185767
Alphaproteobacteria
CCG
Arg
>WENV183733013
PJTY01000018
185767
Alphaproteobacteria
CCG
Arg
>WENV183733119
PJTY01000081
239035
Alphaproteobacteria
CGC
Ala
>WENV183733035
PJTY01000026
236134
Alphaproteobacteria
TAC
Val
>WENV183733424
PJTY01001929
339434
Alphaproteobacteria
CCC
Gly
>WENV183733726
PJTY01016599
339454
Alphaproteobacteria
>WENV183733587
PJTY01005428
251610
Alphaproteobacteria
TGC
Ala
>WENV183733661
PJTY01009788
23627
Alphaproteobacteria
GGA
Ser
>WENV183733742
PJTY01019861
146820
Alphaproteobacteria
CGG
Pro
>WENV183733481
PJTY01002655
146820
Alphaproteobacteria
CGG
Pro
>WENV183732967
PJTY01000009
243803
Alphaproteobacteria
CAT
Met
>WENV183733453
PJTY01002235
146818
Alphaproteobacteria
CAT
Met
>WENV183733855
PJTY01037809
26410
Alphaproteobacteria
TGA
Ser
>WENV183732984
PJTY01000012
236004
Alphaproteobacteria
TTT
Lys
>WENV183733798
PJTY01028190
417050
Alphaproteobacteria
CCC
Gly
>WENV183733026
PJTY01000021
24459
Alphaproteobacteria
CGA
Ser
>WENV183733310
PJTY01000844
153154
Alphaproteobacteria
TAC
Val
>WENV183733053
PJTY01000031
173246
Alphaproteobacteria
CCT
Arg
>WENV183733246
PJTY01000438
339432
Alphaproteobacteria
GTT
Asn
>WENV183733614
PJTY01006705
235427
Alphaproteobacteria
CCA
Trp
>WENV183733153
PJTY01000132
239037
Alphaproteobacteria
TTT
Lys
>WENV183733004
PJTY01000017
167926
Alphaproteobacteria
CAT
Met
>WENV183733227
PJTY01000382
364533
Alphaproteobacteria
GCC
Gly
>WENV183733622
PJTY01007692
130084
Alphaproteobacteria
GGG
Pro
>WENV183733655
PJTY01009416
29390
Alphaproteobacteria
CGA
Ser
>WENV183733527
PJTY01003616
25533
Alphaproteobacteria
GGA
Ser
>WENV183733603
PJTY01006251
23392
Alphaproteobacteria
GGA
Ser
>WENV183732922
PJTY01000001
65244
Alphaproteobacteria
CAG
Leu
>WENV183733339
PJTY01001196
10657
Alphaproteobacteria
GCT
Ser
>WENV183732972
PJTY01000010
10657
Alphaproteobacteria
GCT
Ser
>WENV183732968
PJTY01000009
80837
Alphaproteobacteria
TAA
Leu
>WENV183733206
PJTY01000263
338622
Alphaproteobacteria
GTT
Asn
>WENV183733205
PJTY01000263
338622
Alphaproteobacteria
GTT
Asn
>WENV183733171
PJTY01000207
338622
Alphaproteobacteria
GTT
Asn
>WENV183733102
PJTY01000066
338622
Alphaproteobacteria
GTT
Asn
>WENV183733043
PJTY01000028
338622
Alphaproteobacteria
GTT
Asn
>WENV183732931
PJTY01000002
338622
Alphaproteobacteria
GTT
Asn
>WENV183733618
PJTY01007291
237196
Alphaproteobacteria
CGT
Thr
>WENV183733487
PJTY01002731
10642
Alphaproteobacteria
GCT
Ser
>WENV183733594
PJTY01005833
23744
Alphaproteobacteria
TGA
Ser
>WENV183733800
PJTY01028591
339436
Alphaproteobacteria
>WENV183733577
PJTY01005127
339436
Alphaproteobacteria
>WENV183733363
PJTY01001343
339436
Alphaproteobacteria
>WENV183733752
PJTY01022205
352191
Alphaproteobacteria
GGT
Thr
>WENV183733011
PJTY01000018
369678
Alphaproteobacteria
GGT
Thr
>WENV183733639
PJTY01008289
235430
Alphaproteobacteria
TTT
Lys
>WENV183733505
PJTY01003043
267554
Alphaproteobacteria
TGC
Ala
>WENV183733687
PJTY01011529
23743
Alphaproteobacteria
GCT
Ser
>WENV183733470
PJTY01002530
101826
Alphaproteobacteria
TAG
Leu
>WENV183733477
PJTY01002635
146817
Alphaproteobacteria
GTG
His
>WENV183733708
PJTY01013692
237439
Alphaproteobacteria
CTT
Lys
>WENV183732983
PJTY01000012
62052
Alphaproteobacteria
GAG
Leu
>WENV183733165
PJTY01000166
343498
Alphaproteobacteria
GGT
Thr
>WENV183733537
PJTY01003944
411617
Alphaproteobacteria
GCA
Cys
>WENV183733741
PJTY01019734
238639
Alphaproteobacteria
CGC
Ala
>WENV183733615
PJTY01006776
113767
Alphaproteobacteria
>WENV183733199
PJTY01000239
426627
Alphaproteobacteria
TCC
Gly
>WENV183733012
PJTY01000018
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK