This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183739746
PJUF01000005
237800
Alphaproteobacteria
>WENV183740960
PJUF01021961
401702
Alphaproteobacteria
>WENV183740959
PJUF01021961
401702
Alphaproteobacteria
>WENV183739900
PJUF01000055
339495
Alphaproteobacteria
>WENV183741215
PJUF01058422
144972
Alphaproteobacteria
>WENV183740320
PJUF01001167
339436
Alphaproteobacteria
>WENV183741231
PJUF01061742
147152
Alphaproteobacteria
ACG
Arg
>WENV183739757
PJUF01000006
147152
Alphaproteobacteria
ACG
Arg
>WENV183739714
PJUF01000001
166353
Alphaproteobacteria
ACG
Arg
>WENV183741288
PJUF01074983
98423
Alphaproteobacteria
CAA
Leu
>WENV183741062
PJUF01033523
96061
Alphaproteobacteria
CAA
Leu
>WENV183740454
PJUF01002329
340310
Alphaproteobacteria
CAC
Val
>WENV183739711
PJUF01000001
59118
Alphaproteobacteria
CAG
Leu
>WENV183741358
PJUF01098471
75256
Alphaproteobacteria
CAG
Leu
>WENV183741258
PJUF01069090
75256
Alphaproteobacteria
CAG
Leu
>WENV183741210
PJUF01057168
75256
Alphaproteobacteria
CAG
Leu
>WENV183740495
PJUF01002738
159426
Alphaproteobacteria
CAT
Met
>WENV183741064
PJUF01034034
200119
Alphaproteobacteria
CAT
Met
>WENV183740062
PJUF01000255
146818
Alphaproteobacteria
CAT
Met
>WENV183741259
PJUF01070031
237571
Alphaproteobacteria
CAT
Met
>WENV183740501
PJUF01002829
154227
Alphaproteobacteria
CAT
Met
>WENV183739809
PJUF01000020
306070
Alphaproteobacteria
CCA
Trp
>WENV183740278
PJUF01000962
306070
Alphaproteobacteria
CCA
Trp
>WENV183740353
PJUF01001321
237197
Alphaproteobacteria
CCA
Trp
>WENV183740738
PJUF01008177
318048
Alphaproteobacteria
CCA
Trp
>WENV183740951
PJUF01020772
237474
Alphaproteobacteria
CCA
Trp
>WENV183740037
PJUF01000178
339434
Alphaproteobacteria
CCC
Gly
>WENV183740636
PJUF01005013
187569
Alphaproteobacteria
CCG
Arg
>WENV183739985
PJUF01000114
187569
Alphaproteobacteria
CCG
Arg
>WENV183740973
PJUF01023312
146903
Alphaproteobacteria
CCT
Arg
>WENV183741250
PJUF01067043
146854
Alphaproteobacteria
CCT
Arg
>WENV183740244
PJUF01000839
146854
Alphaproteobacteria
CCT
Arg
>WENV183741222
PJUF01060416
175860
Alphaproteobacteria
CCT
Arg
>WENV183740284
PJUF01001005
23605
Alphaproteobacteria
CGA
Ser
>WENV183740150
PJUF01000487
23842
Alphaproteobacteria
CGA
Ser
>WENV183741083
PJUF01038045
23538
Alphaproteobacteria
CGA
Ser
>WENV183740175
PJUF01000594
23611
Alphaproteobacteria
CGA
Ser
>WENV183740864
PJUF01013945
319584
Alphaproteobacteria
CGC
Ala
>WENV183741081
PJUF01037375
199776
Alphaproteobacteria
CGG
Pro
>WENV183740157
PJUF01000502
146820
Alphaproteobacteria
CGG
Pro
>WENV183741207
PJUF01056449
144969
Alphaproteobacteria
CGG
Pro
>WENV183740608
PJUF01004376
247224
Alphaproteobacteria
CGT
Thr
>WENV183740048
PJUF01000197
237281
Alphaproteobacteria
CGT
Thr
>WENV183739715
PJUF01000002
237281
Alphaproteobacteria
CGT
Thr
>WENV183739713
PJUF01000001
257056
Alphaproteobacteria
CGT
Thr
>WENV183740363
PJUF01001429
412153
Alphaproteobacteria
CTG
Gln
>WENV183741042
PJUF01031233
428521
Alphaproteobacteria
CTG
Gln
>WENV183740095
PJUF01000330
428521
Alphaproteobacteria
CTG
Gln
>WENV183739785
PJUF01000011
428521
Alphaproteobacteria
CTG
Gln
>WENV183739772
PJUF01000008
244489
Alphaproteobacteria
CTT
Lys
>WENV183741040
PJUF01030765
253273
Alphaproteobacteria
CTT
Lys
>WENV183740047
PJUF01000196
237579
Alphaproteobacteria
CTT
Lys
>WENV183739734
PJUF01000004
237579
Alphaproteobacteria
CTT
Lys
>WENV183740319
PJUF01001156
237439
Alphaproteobacteria
CTT
Lys
>WENV183741069
PJUF01035071
254522
Alphaproteobacteria
GAA
Phe
>WENV183741271
PJUF01072704
338268
Alphaproteobacteria
GAC
Val
>WENV183739807
PJUF01000020
96238
Alphaproteobacteria
GAG
Leu
>WENV183740455
PJUF01002332
96238
Alphaproteobacteria
GAG
Leu
>WENV183741196
PJUF01054429
59361
Alphaproteobacteria
GAG
Leu
>WENV183740063
PJUF01000255
364533
Alphaproteobacteria
GCC
Gly
>WENV183740255
PJUF01000852
10642
Alphaproteobacteria
GCT
Ser
>WENV183741053
PJUF01032342
16380
Alphaproteobacteria
GCT
Ser
>WENV183739721
PJUF01000002
31286
Alphaproteobacteria
GGA
Ser
>WENV183740706
PJUF01007153
16408
Alphaproteobacteria
GGA
Ser
>WENV183740257
PJUF01000865
25533
Alphaproteobacteria
GGA
Ser
>WENV183741315
PJUF01084056
152510
Alphaproteobacteria
GGG
Pro
>WENV183741255
PJUF01068748
152510
Alphaproteobacteria
GGG
Pro
>WENV183741221
PJUF01060319
152510
Alphaproteobacteria
GGG
Pro
>WENV183741030
PJUF01029919
366499
Alphaproteobacteria
GGT
Thr
>WENV183739774
PJUF01000008
114616
Alphaproteobacteria
GTA
Tyr
>WENV183741294
PJUF01078087
95946
Alphaproteobacteria
GTA
Tyr
>WENV183740566
PJUF01003572
148854
Alphaproteobacteria
GTC
Asp
>WENV183741285
PJUF01074189
147289
Alphaproteobacteria
GTC
Asp
>WENV183741284
PJUF01074189
147289
Alphaproteobacteria
GTC
Asp
>WENV183739859
PJUF01000031
147289
Alphaproteobacteria
GTC
Asp
>WENV183739829
PJUF01000025
147289
Alphaproteobacteria
GTC
Asp
>WENV183741022
PJUF01028565
146875
Alphaproteobacteria
GTG
His
>WENV183740267
PJUF01000890
202028
Alphaproteobacteria
GTG
His
>WENV183740900
PJUF01016591
146848
Alphaproteobacteria
GTG
His
>WENV183740362
PJUF01001424
146817
Alphaproteobacteria
GTG
His
>WENV183740171
PJUF01000583
339432
Alphaproteobacteria
GTT
Asn
>WENV183740891
PJUF01015879
338622
Alphaproteobacteria
GTT
Asn
>WENV183739747
PJUF01000005
338622
Alphaproteobacteria
GTT
Asn
>WENV183741127
PJUF01043796
95936
Alphaproteobacteria
TAA
Leu
>WENV183740168
PJUF01000570
153154
Alphaproteobacteria
TAC
Val
>WENV183740656
PJUF01005503
99726
Alphaproteobacteria
TAG
Leu
>WENV183739943
PJUF01000086
97145
Alphaproteobacteria
TAG
Leu
>WENV183741063
PJUF01033753
95631
Alphaproteobacteria
TAG
Leu
>WENV183739748
PJUF01000005
101826
Alphaproteobacteria
TAG
Leu
>WENV183739775
PJUF01000008
424918
Alphaproteobacteria
TCC
Gly
>WENV183740680
PJUF01006269
166801
Alphaproteobacteria
TCG
Arg
>WENV183740940
PJUF01019747
146858
Alphaproteobacteria
TCT
Arg
>WENV183739754
PJUF01000005
31506
Alphaproteobacteria
TGA
Ser
>WENV183741080
PJUF01036632
23717
Alphaproteobacteria
TGA
Ser
>WENV183740790
PJUF01010357
316120
Alphaproteobacteria
TGC
Ala
>WENV183740546
PJUF01003322
146864
Alphaproteobacteria
TGG
Pro
>WENV183741262
PJUF01070680
144964
Alphaproteobacteria
TGG
Pro
>WENV183740418
PJUF01001816
146819
Alphaproteobacteria
TTT
Lys
>WENV183740811
PJUF01011445
236004
Alphaproteobacteria
TTT
Lys
>WENV183740322
PJUF01001173
237479
Alphaproteobacteria
TTT
Lys
>WENV183741145
PJUF01046958
266073
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK