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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015822
AZIJ01000274
270982
Gammaproteobacteria
GAT
Ile
>WENV170015825
AZIJ01000329
271409
Gammaproteobacteria
CCG
Arg
>WENV170015829
AZIJ01000596
179960
Gammaproteobacteria
TAG
Leu
>WENV170015831
AZIJ01000596
179960
Gammaproteobacteria
TAG
Leu
>WENV170015830
AZIJ01000596
779459
Gammaproteobacteria
CCA
Trp
>WENV170015832
AZIJ01000596
779459
Gammaproteobacteria
CCA
Trp
>WENV170015833
AZIJ01000677
157258
Gammaproteobacteria
CAG
Leu
>WENV170015834
AZIJ01000677
157258
Gammaproteobacteria
CAG
Leu
>WENV170015835
AZIJ01000677
157258
Gammaproteobacteria
CAG
Leu
>WENV170015841
AZIJ01000886
452413
Gammaproteobacteria
GGC
Ala
>WENV170015842
AZIJ01000886
452414
Gammaproteobacteria
TTC
Glu
>WENV170015861
AZIJ01001928
657394
Gammaproteobacteria
GGT
Thr
>WENV170015860
AZIJ01001928
657393
Gammaproteobacteria
TCC
Gly
>WENV170015864
AZIJ01002081
455855
Gammaproteobacteria
GAA
Phe
>WENV170015871
AZIJ01002550
46215
Gammaproteobacteria
GCT
Ser
>WENV170015872
AZIJ01002550
271456
Gammaproteobacteria
ACG
Arg
>WENV170015873
AZIJ01002550
271456
Gammaproteobacteria
ACG
Arg
>WENV170015882
AZIJ01002803
271613
Gammaproteobacteria
GTC
Asp
>WENV170015911
AZIJ01003864
464809
Gammaproteobacteria
GAA
Phe
>WENV170015913
AZIJ01004145
12367
Gammaproteobacteria
GCT
Ser
>WENV170015914
AZIJ01004146
298662
Gammaproteobacteria
ACG
Arg
>WENV170015915
AZIJ01004164
271458
Gammaproteobacteria
GGG
Pro
>WENV170015921
AZIJ01004315
180500
Gammaproteobacteria
TAG
Leu
>WENV170015934
AZIJ01004679
455342
Gammaproteobacteria
TTC
Glu
>WENV170015935
AZIJ01004679
456881
Gammaproteobacteria
GGC
Ala
>WENV170015941
AZIJ01004880
452412
Gammaproteobacteria
GCC
Gly
>WENV170015940
AZIJ01004880
452414
Gammaproteobacteria
TTC
Glu
>WENV170015950
AZIJ01005436
452416
Gammaproteobacteria
TTT
Lys
>WENV170015951
AZIJ01005436
452416
Gammaproteobacteria
TTT
Lys
>WENV170015976
AZIJ01006029
780242
Gammaproteobacteria
GCA
Cys
>WENV170015983
AZIJ01006085
456725
Gammaproteobacteria
GTG
His
>WENV170015985
AZIJ01006087
275485
Gammaproteobacteria
GTC
Asp
>WENV170015993
AZIJ01006494
180705
Gammaproteobacteria
GTA
Tyr
>WENV170016045
AZIJ01009965
30593
Gammaproteobacteria
GCT
Ser
>WENV170016051
AZIJ01010542
451732
Gammaproteobacteria
GCC
Gly
>WENV170016065
AZIJ01011257
451732
Gammaproteobacteria
GCC
Gly
>WENV170016068
AZIJ01011611
452412
Gammaproteobacteria
GCC
Gly
>WENV170016090
AZIJ01012401
180705
Gammaproteobacteria
GTA
Tyr
>WENV170016089
AZIJ01012401
482266
Gammaproteobacteria
TGT
Thr
>WENV170016094
AZIJ01012402
275457
Gammaproteobacteria
ACG
Arg
>WENV170016104
AZIJ01012670
46137
Gammaproteobacteria
GGA
Ser
>WENV170016112
AZIJ01012895
276976
Gammaproteobacteria
TCT
Arg
>WENV170016157
AZIJ01013380
452416
Gammaproteobacteria
TTT
Lys
>WENV170016158
AZIJ01013380
452416
Gammaproteobacteria
TTT
Lys
>WENV170016173
AZIJ01013913
454471
Gammaproteobacteria
TGT
Thr
>WENV170016177
AZIJ01014587
298661
Gammaproteobacteria
CAT
Met
>WENV170016178
AZIJ01014587
671271
Gammaproteobacteria
TTG
Gln
>WENV170016179
AZIJ01014587
671271
Gammaproteobacteria
TTG
Gln
>WENV170016186
AZIJ01015104
271254
Gammaproteobacteria
CAT
Met
>WENV170016209
AZIJ01016630
87344
Gammaproteobacteria
GGA
Ser
>WENV170016227
AZIJ01017521
452332
Gammaproteobacteria
GTG
His
>WENV170016232
AZIJ01017707
273863
Gammaproteobacteria
GGG
Pro
>WENV170016233
AZIJ01017753
481051
Gammaproteobacteria
TAC
Val
>WENV170016237
AZIJ01017841
482264
Gammaproteobacteria
TAC
Val
>WENV170016238
AZIJ01017841
456513
Gammaproteobacteria
TAC
Val
>WENV170016240
AZIJ01017857
271697
Gammaproteobacteria
GAC
Val
>WENV170016253
AZIJ01018414
780642
Gammaproteobacteria
GCA
Cys
>WENV170016269
AZIJ01018913
273863
Gammaproteobacteria
GGG
Pro
>WENV170016273
AZIJ01019059
451784
Gammaproteobacteria
GAA
Phe
>WENV170016278
AZIJ01019141
86880
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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