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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
187 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170578190
FUFK010003899
273450
Alphaproteobacteria
TCT
Arg
>WENV170578232
FUFK010012107
780039
Alphaproteobacteria
GCA
Cys
>WENV170578255
FUFK010014287
274003
Alphaproteobacteria
CGG
Pro
>WENV170578259
FUFK010014309
180561
Alphaproteobacteria
TAG
Leu
>WENV170578717
FUFK010027685
19999
Alphaproteobacteria
GCT
Ser
>WENV170578735
FUFK010031048
780039
Alphaproteobacteria
GCA
Cys
>WENV170579010
FUFK010037739
454059
Alphaproteobacteria
TTT
Lys
>WENV170579150
FUFK010038158
112839
Alphaproteobacteria
CAG
Leu
>WENV170579156
FUFK010038165
780039
Alphaproteobacteria
GCA
Cys
>WENV170579200
FUFK010038259
30553
Alphaproteobacteria
GGA
Ser
>WENV170579224
FUFK010038325
780039
Alphaproteobacteria
GCA
Cys
>WENV170579225
FUFK010038325
454180
Alphaproteobacteria
CGT
Thr
>WENV170579232
FUFK010038367
112839
Alphaproteobacteria
CAG
Leu
>WENV170579273
FUFK010038479
274144
Alphaproteobacteria
GTG
His
>WENV170579284
FUFK010038525
273450
Alphaproteobacteria
TCT
Arg
>WENV170579296
FUFK010038544
655365
Alphaproteobacteria
TTC
Glu
>WENV170579297
FUFK010038544
655365
Alphaproteobacteria
TTC
Glu
>WENV170579318
FUFK010038609
274234
Alphaproteobacteria
CAT
Met
>WENV170579320
FUFK010038612
47329
Alphaproteobacteria
TGA
Ser
>WENV170579381
FUFK010038834
455360
Alphaproteobacteria
CGC
Ala
>WENV170579443
FUFK010039119
274138
Alphaproteobacteria
CAT
Met
>WENV170579450
FUFK010039127
274224
Alphaproteobacteria
CAT
Met
>WENV170579491
FUFK010039316
30553
Alphaproteobacteria
GGA
Ser
>WENV170579548
FUFK010039629
455289
Alphaproteobacteria
TTT
Lys
>WENV170579549
FUFK010039629
454512
Alphaproteobacteria
CCA
Trp
>WENV170579550
FUFK010039629
780346
Alphaproteobacteria
CTG
Gln
>WENV170579551
FUFK010039629
19999
Alphaproteobacteria
GCT
Ser
>WENV170579566
FUFK010039709
112839
Alphaproteobacteria
CAG
Leu
>WENV170579600
FUFK010039945
19999
Alphaproteobacteria
GCT
Ser
>WENV170579601
FUFK010039945
780039
Alphaproteobacteria
GCA
Cys
>WENV170579623
FUFK010040091
455289
Alphaproteobacteria
TTT
Lys
>WENV170579624
FUFK010040091
454512
Alphaproteobacteria
CCA
Trp
>WENV170579625
FUFK010040091
780039
Alphaproteobacteria
GCA
Cys
>WENV170579669
FUFK010040287
180561
Alphaproteobacteria
TAG
Leu
>WENV170579695
FUFK010040425
274141
Alphaproteobacteria
CCT
Arg
>WENV170579711
FUFK010040475
273450
Alphaproteobacteria
TCT
Arg
>WENV170579722
FUFK010040541
273450
Alphaproteobacteria
TCT
Arg
>WENV170579785
FUFK010040945
655363
Alphaproteobacteria
GGT
Thr
>WENV170579786
FUFK010040945
780331
Alphaproteobacteria
TCC
Gly
>WENV170579833
FUFK010041577
30553
Alphaproteobacteria
GGA
Ser
>WENV170579856
FUFK010041837
274142
Alphaproteobacteria
GAT
Ile
>WENV170579861
FUFK010041856
112839
Alphaproteobacteria
CAG
Leu
>WENV170579864
FUFK010041941
780039
Alphaproteobacteria
GCA
Cys
>WENV170580016
FUFK010043436
655365
Alphaproteobacteria
TTC
Glu
>WENV170580048
FUFK010043887
30553
Alphaproteobacteria
GGA
Ser
>WENV170580107
FUFK010044408
274142
Alphaproteobacteria
GAT
Ile
>WENV170580109
FUFK010044408
19999
Alphaproteobacteria
GCT
Ser
>WENV170580121
FUFK010044469
455289
Alphaproteobacteria
TTT
Lys
>WENV170580557
FUFK010047503
655363
Alphaproteobacteria
GGT
Thr
>WENV170580655
FUFK010049144
655361
Alphaproteobacteria
GCC
Gly
>WENV170580674
FUFK010049424
30553
Alphaproteobacteria
GGA
Ser
>WENV170580906
FUFK010054147
274142
Alphaproteobacteria
GAT
Ile
>WENV170580957
FUFK010055208
780331
Alphaproteobacteria
TCC
Gly
>WENV170580968
FUFK010055709
19999
Alphaproteobacteria
GCT
Ser
>WENV170581035
FUFK010057071
281955
Alphaproteobacteria
CAT
Met
>WENV170581277
FUFK010060742
276089
Alphaproteobacteria
CCG
Arg
>WENV170581279
FUFK010060742
655361
Alphaproteobacteria
GCC
Gly
>WENV170581286
FUFK010060768
47329
Alphaproteobacteria
TGA
Ser
>WENV170581322
FUFK010061182
274144
Alphaproteobacteria
GTG
His
>WENV170581339
FUFK010061410
291540
Alphaproteobacteria
TGG
Pro
>WENV170581373
FUFK010061906
655361
Alphaproteobacteria
GCC
Gly
>WENV170581409
FUFK010062325
780039
Alphaproteobacteria
GCA
Cys
>WENV170581410
FUFK010062325
454180
Alphaproteobacteria
CGT
Thr
>WENV170581429
FUFK010062751
655365
Alphaproteobacteria
TTC
Glu
>WENV170581430
FUFK010062751
655365
Alphaproteobacteria
TTC
Glu
>WENV170581453
FUFK010063492
112839
Alphaproteobacteria
CAG
Leu
>WENV170581503
FUFK010064358
276089
Alphaproteobacteria
CCG
Arg
>WENV170581548
FUFK010064731
274138
Alphaproteobacteria
CAT
Met
>WENV170581594
FUFK010065253
30553
Alphaproteobacteria
GGA
Ser
>WENV170581673
FUFK010066125
454059
Alphaproteobacteria
TTT
Lys
>WENV170581722
FUFK010066824
274138
Alphaproteobacteria
CAT
Met
>WENV170581748
FUFK010067116
274144
Alphaproteobacteria
GTG
His
>WENV170582009
FUFK010072360
274144
Alphaproteobacteria
GTG
His
>WENV170582010
FUFK010072360
274224
Alphaproteobacteria
CAT
Met
>WENV170582674
FUFK010106789
667632
Alphaproteobacteria
GGT
Thr
>WENV170582749
FUFK010109981
281029
Alphaproteobacteria
GGG
Pro
>WENV170582794
FUFK010111985
655365
Alphaproteobacteria
TTC
Glu
>WENV170582798
FUFK010112561
780039
Alphaproteobacteria
GCA
Cys
>WENV170582799
FUFK010112561
454180
Alphaproteobacteria
CGT
Thr
>WENV170582906
FUFK010115937
273450
Alphaproteobacteria
TCT
Arg
>WENV170583088
FUFK010121943
274141
Alphaproteobacteria
CCT
Arg
>WENV170583123
FUFK010122890
454433
Alphaproteobacteria
TGT
Thr
>WENV170583190
FUFK010125908
655361
Alphaproteobacteria
GCC
Gly
>WENV170583542
FUFK010144971
273603
Alphaproteobacteria
TGG
Pro
>WENV170583896
FUFK010172334
274224
Alphaproteobacteria
CAT
Met
>WENV170583901
FUFK010172803
780331
Alphaproteobacteria
TCC
Gly
>WENV170583905
FUFK010173046
180561
Alphaproteobacteria
TAG
Leu
>WENV170583926
FUFK010175224
655361
Alphaproteobacteria
GCC
Gly
>WENV170583951
FUFK010177508
31090
Alphaproteobacteria
GGA
Ser
>WENV170583956
FUFK010178110
30553
Alphaproteobacteria
GGA
Ser
>WENV170583964
FUFK010178979
455360
Alphaproteobacteria
CGC
Ala
>WENV170583995
FUFK010182288
112839
Alphaproteobacteria
CAG
Leu
>WENV170584006
FUFK010183321
780039
Alphaproteobacteria
GCA
Cys
>WENV170584622
FUFK010225953
454059
Alphaproteobacteria
TTT
Lys
>WENV170584654
FUFK010228132
454059
Alphaproteobacteria
TTT
Lys
>WENV170585128
FUFK010263457
273603
Alphaproteobacteria
TGG
Pro
>WENV170585682
FUFK010315513
780331
Alphaproteobacteria
TCC
Gly
>WENV170585879
FUFK010337565
274142
Alphaproteobacteria
GAT
Ile
>WENV170585982
FUFK010349982
780039
Alphaproteobacteria
GCA
Cys
>WENV170586162
FUFK010372203
454512
Alphaproteobacteria
CCA
Trp
>WENV170586250
FUFK010384455
655365
Alphaproteobacteria
TTC
Glu
>WENV170586299
FUFK010391731
47329
Alphaproteobacteria
TGA
Ser
>WENV170586318
FUFK010395403
454180
Alphaproteobacteria
CGT
Thr
>WENV170586453
FUFK010417655
281026
Alphaproteobacteria
CAT
Met
>WENV170586473
FUFK010419572
114771
Alphaproteobacteria
CAG
Leu
>WENV170586579
FUFK010429171
655363
Alphaproteobacteria
GGT
Thr
>WENV170586581
FUFK010429352
454638
Alphaproteobacteria
GTT
Asn
>WENV170586587
FUFK010429669
780039
Alphaproteobacteria
GCA
Cys
>WENV170586589
FUFK010429691
14158
Alphaproteobacteria
GCT
Ser
>WENV170586602
FUFK010430948
112839
Alphaproteobacteria
CAG
Leu
>WENV170586611
FUFK010431634
655365
Alphaproteobacteria
TTC
Glu
>WENV170586631
FUFK010433168
112839
Alphaproteobacteria
CAG
Leu
>WENV170586989
FUFK010457819
780331
Alphaproteobacteria
TCC
Gly
>WENV170587033
FUFK010461019
455289
Alphaproteobacteria
TTT
Lys
>WENV170587765
FUFK010515966
273450
Alphaproteobacteria
TCT
Arg
>WENV170588512
FUFK010567940
780346
Alphaproteobacteria
CTG
Gln
>WENV170588598
FUFK010575572
30553
Alphaproteobacteria
GGA
Ser
>WENV170588740
FUFK010586045
655365
Alphaproteobacteria
TTC
Glu
>WENV170588741
FUFK010586045
655365
Alphaproteobacteria
TTC
Glu
>WENV170589075
FUFK010614562
454512
Alphaproteobacteria
CCA
Trp
>WENV170589078
FUFK010614918
454059
Alphaproteobacteria
TTT
Lys
>WENV170589134
FUFK010619546
274138
Alphaproteobacteria
CAT
Met
>WENV170589173
FUFK010622463
291540
Alphaproteobacteria
TGG
Pro
>WENV170589236
FUFK010627370
655361
Alphaproteobacteria
GCC
Gly
>WENV170589559
FUFK010652401
30553
Alphaproteobacteria
GGA
Ser
>WENV170590093
FUFK010693237
273603
Alphaproteobacteria
TGG
Pro
>WENV170590392
FUFK010718333
274234
Alphaproteobacteria
CAT
Met
>WENV170590411
FUFK010719010
274144
Alphaproteobacteria
GTG
His
>WENV170590431
FUFK010719540
655365
Alphaproteobacteria
TTC
Glu
>WENV170590432
FUFK010719540
655365
Alphaproteobacteria
TTC
Glu
>WENV170590463
FUFK010719994
281955
Alphaproteobacteria
CAT
Met
>WENV170590471
FUFK010720094
780039
Alphaproteobacteria
GCA
Cys
>WENV170590472
FUFK010720094
454180
Alphaproteobacteria
CGT
Thr
>WENV170590543
FUFK010722127
180561
Alphaproteobacteria
TAG
Leu
>WENV170590548
FUFK010722251
503534
Alphaproteobacteria
TTT
Lys
>WENV170590752
FUFK010736350
454512
Alphaproteobacteria
CCA
Trp
>WENV170590954
FUFK010745972
184579
Alphaproteobacteria
CAG
Leu
>WENV170590973
FUFK010746620
274224
Alphaproteobacteria
CAT
Met
>WENV170591026
FUFK010748318
780039
Alphaproteobacteria
GCA
Cys
>WENV170591055
FUFK010749066
454433
Alphaproteobacteria
TGT
Thr
>WENV170591104
FUFK010751888
30553
Alphaproteobacteria
GGA
Ser
>WENV170591198
FUFK010754760
780039
Alphaproteobacteria
GCA
Cys
>WENV170591267
FUFK010758363
19999
Alphaproteobacteria
GCT
Ser
>WENV170591301
FUFK010760424
112838
Alphaproteobacteria
GAG
Leu
>WENV170591342
FUFK010764281
276089
Alphaproteobacteria
CCG
Arg
>WENV170591345
FUFK010764796
273450
Alphaproteobacteria
TCT
Arg
>WENV170591355
FUFK010765509
273450
Alphaproteobacteria
TCT
Arg
>WENV170591413
FUFK010769385
180561
Alphaproteobacteria
TAG
Leu
>WENV170591415
FUFK010769528
274142
Alphaproteobacteria
GAT
Ile
>WENV170591422
FUFK010769995
47329
Alphaproteobacteria
TGA
Ser
>WENV170591448
FUFK010772626
273603
Alphaproteobacteria
TGG
Pro
>WENV170591479
FUFK010775633
30553
Alphaproteobacteria
GGA
Ser
>WENV170591519
FUFK010777751
274142
Alphaproteobacteria
GAT
Ile
>WENV170591538
FUFK010779416
780039
Alphaproteobacteria
GCA
Cys
>WENV170592259
FUFK010803280
30553
Alphaproteobacteria
GGA
Ser
>WENV170592350
FUFK010805449
273450
Alphaproteobacteria
TCT
Arg
>WENV170592550
FUFK010809030
274234
Alphaproteobacteria
CAT
Met
>WENV170593019
FUFK010836605
780346
Alphaproteobacteria
CTG
Gln
>WENV170593100
FUFK010843608
281955
Alphaproteobacteria
CAT
Met
>WENV170593187
FUFK010851996
503567
Alphaproteobacteria
TGT
Thr
>WENV170593329
FUFK010860446
116949
Alphaproteobacteria
CAG
Leu
>WENV170593391
FUFK010872976
274144
Alphaproteobacteria
GTG
His
>WENV170593426
FUFK010880552
281955
Alphaproteobacteria
CAT
Met
>WENV170593470
FUFK010887905
452565
Alphaproteobacteria
GAA
Phe
>WENV170593496
FUFK010894020
273450
Alphaproteobacteria
TCT
Arg
>WENV170593581
FUFK010917273
287497
Alphaproteobacteria
GTC
Asp
>WENV170593656
FUFK010955100
276128
Alphaproteobacteria
CCT
Arg
>WENV170593658
FUFK010955727
46323
Alphaproteobacteria
TGA
Ser
>WENV170593792
FUFK011011896
19999
Alphaproteobacteria
GCT
Ser
>WENV170593825
FUFK011028874
465568
Alphaproteobacteria
GGC
Ala
>WENV170594122
FUFK011189082
281026
Alphaproteobacteria
CAT
Met
>WENV170594293
FUFK011265312
784639
Alphaproteobacteria
TCC
Gly
>WENV170594364
FUFK011288383
784639
Alphaproteobacteria
TCC
Gly
>WENV170594658
FUFK011412260
780331
Alphaproteobacteria
TCC
Gly
>WENV170594781
FUFK011469064
457348
Alphaproteobacteria
CTC
Glu
>WENV170594874
FUFK011512798
477874
Alphaproteobacteria
CCA
Trp
>WENV170594900
FUFK011522118
456892
Alphaproteobacteria
CGC
Ala
>WENV170595135
FUFK011639290
273603
Alphaproteobacteria
TGG
Pro
>WENV170595647
FUFK011902706
19999
Alphaproteobacteria
GCT
Ser
>WENV170595758
FUFK011959469
287497
Alphaproteobacteria
GTC
Asp
>WENV170595780
FUFK011968265
465568
Alphaproteobacteria
GGC
Ala
>WENV170595878
FUFK012010861
19999
Alphaproteobacteria
GCT
Ser
>WENV170595885
FUFK012013008
780126
Alphaproteobacteria
GCA
Cys
>WENV170595941
FUFK012028663
780331
Alphaproteobacteria
TCC
Gly
>WENV170595955
FUFK012037418
454059
Alphaproteobacteria
TTT
Lys
>WENV170596008
FUFK012070693
304024
Alphaproteobacteria
GAT
Ile
>WENV170596179
FUFK012138234
30553
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK