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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180345787
OBLN01005538
238531
Euryarchaeota
GTT
Asn
>WENV180345789
OBLN01005538
238531
Euryarchaeota
GTT
Asn
>WENV180345464
OBLN01000213
119893
Euryarchaeota
CGA
Ser
>WENV180346507
OBLN01129339
339958
Euryarchaeota
CGT
Thr
>WENV180347068
OBLN01544410
147811
Euryarchaeota
GAT
Ile
>WENV180345442
OBLN01000129
339957
Euryarchaeota
GGC
Ala
>WENV180345573
OBLN01000698
47356
Euryarchaeota
>WENV180345574
OBLN01000698
47356
Euryarchaeota
>WENV180345445
OBLN01000133
147810
Euryarchaeota
CTT
Lys
>WENV180346341
OBLN01066560
147812
Euryarchaeota
TAC
Val
>WENV180345918
OBLN01011206
147809
Euryarchaeota
TGT
Thr
>WENV180346541
OBLN01148828
147809
Euryarchaeota
TGT
Thr
>WENV180345371
OBLN01000001
255887
Euryarchaeota
TGC
Ala
>WENV180345795
OBLN01005727
81000
Euryarchaeota
CAA
Leu
>WENV180345634
OBLN01001325
47190
Euryarchaeota
>WENV180345635
OBLN01001325
47190
Euryarchaeota
>WENV180345468
OBLN01000235
127186
Euryarchaeota
>WENV180345736
OBLN01003705
129125
Euryarchaeota
GGG
Pro
>WENV180345661
OBLN01002075
238535
Euryarchaeota
CTG
Gln
>WENV180346051
OBLN01022602
238535
Euryarchaeota
CTG
Gln
>WENV180346104
OBLN01026605
147813
Euryarchaeota
>WENV180345424
OBLN01000067
147813
Euryarchaeota
>WENV180345641
OBLN01001499
147813
Euryarchaeota
>WENV180345788
OBLN01005538
127185
Euryarchaeota
CAT
Met
>WENV180345640
OBLN01001421
339963
Euryarchaeota
CGC
Ala
>WENV180347072
OBLN01545172
339964
Euryarchaeota
GAA
Phe
>WENV180345638
OBLN01001399
339960
Euryarchaeota
CCC
Gly
>WENV180345742
OBLN01003951
47032
Euryarchaeota
TAA
Leu
>WENV180345372
OBLN01000001
350749
Euryarchaeota
GCA
Cys
>WENV180345551
OBLN01000596
45256
Euryarchaeota
GCT
Ser
>WENV180345633
OBLN01001325
80999
Euryarchaeota
GGA
Ser
>WENV180345657
OBLN01001944
253779
Euryarchaeota
>WENV180345580
OBLN01000768
127188
Euryarchaeota
TCT
Arg
>WENV180345426
OBLN01000070
130311
Euryarchaeota
TTC
Glu
>WENV180345427
OBLN01000070
130311
Euryarchaeota
TTC
Glu
>WENV180345428
OBLN01000070
130311
Euryarchaeota
TTC
Glu
>WENV180345408
OBLN01000044
238534
Euryarchaeota
GTC
Asp
>WENV180345431
OBLN01000080
238534
Euryarchaeota
GTC
Asp
>WENV180345437
OBLN01000103
339956
Euryarchaeota
GCC
Gly
>WENV180345459
OBLN01000197
339956
Euryarchaeota
GCC
Gly
>WENV180345814
OBLN01006483
339956
Euryarchaeota
GCC
Gly
>WENV180345963
OBLN01015277
173325
Euryarchaeota
TTT
Lys
>WENV180345490
OBLN01000332
339959
Euryarchaeota
>WENV180346883
OBLN01381949
339959
Euryarchaeota
>WENV180346295
OBLN01057333
127184
Euryarchaeota
CTC
Glu
>WENV180346432
OBLN01096899
241681
Euryarchaeota
TGC
Ala
>WENV180345651
OBLN01001802
127189
Euryarchaeota
CCT
Arg
>WENV180345395
OBLN01000017
339955
Euryarchaeota
GGT
Thr
>WENV180346813
OBLN01316635
339955
Euryarchaeota
GGT
Thr
>WENV180345483
OBLN01000274
147808
Euryarchaeota
TTT
Lys
>WENV180345825
OBLN01006905
360399
Euryarchaeota
CGC
Ala
>WENV180345611
OBLN01001016
339965
Euryarchaeota
>WENV180345441
OBLN01000115
349722
Euryarchaeota
>WENV180346440
OBLN01097962
339966
Euryarchaeota
TCC
Gly
>WENV180345374
OBLN01000001
127190
Euryarchaeota
CAT
Met
>WENV180345375
OBLN01000001
127190
Euryarchaeota
CAT
Met
>WENV180345675
OBLN01002308
127190
Euryarchaeota
CAT
Met
>WENV180345676
OBLN01002308
127190
Euryarchaeota
CAT
Met
>WENV180345392
OBLN01000011
47355
Euryarchaeota
GCT
Ser
>WENV180345962
OBLN01015255
47355
Euryarchaeota
GCT
Ser
>WENV180345400
OBLN01000025
351482
Euryarchaeota
GTG
His
>WENV180345700
OBLN01002885
47031
Euryarchaeota
TGA
Ser
>WENV180345883
OBLN01008770
238533
Euryarchaeota
TTG
Gln
>WENV180346718
OBLN01246211
47393
Euryarchaeota
>WENV180345652
OBLN01001813
127187
Euryarchaeota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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