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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180345640
OBLN01001421
400781
Euryarchaeota
CGC
Ala
>WENV180345371
OBLN01000001
303464
Euryarchaeota
TGC
Ala
>WENV180345580
OBLN01000768
156310
Euryarchaeota
TCT
Arg
>WENV180347072
OBLN01545172
400782
Euryarchaeota
GAA
Phe
>WENV180345372
OBLN01000001
411382
Euryarchaeota
>WENV180345441
OBLN01000115
411382
Euryarchaeota
>WENV180345661
OBLN01002075
303566
Euryarchaeota
CTG
Gln
>WENV180345742
OBLN01003951
58593
Euryarchaeota
TAA
Leu
>WENV180345504
OBLN01000397
56523
Euryarchaeota
TAG
Leu
>WENV180345652
OBLN01001813
156308
Euryarchaeota
>WENV180345651
OBLN01001802
160996
Euryarchaeota
CCT
Arg
>WENV180345634
OBLN01001325
58772
Euryarchaeota
>WENV180345635
OBLN01001325
58772
Euryarchaeota
>WENV180346718
OBLN01246211
58592
Euryarchaeota
>WENV180345675
OBLN01002308
156312
Euryarchaeota
CAT
Met
>WENV180345676
OBLN01002308
156312
Euryarchaeota
CAT
Met
>WENV180345400
OBLN01000025
413250
Euryarchaeota
GTG
His
>WENV180345883
OBLN01008770
284155
Euryarchaeota
TTG
Gln
>WENV180345551
OBLN01000596
60668
Euryarchaeota
GCT
Ser
>WENV180345611
OBLN01001016
400783
Euryarchaeota
>WENV180345787
OBLN01005538
284153
Euryarchaeota
GTT
Asn
>WENV180345789
OBLN01005538
284153
Euryarchaeota
GTT
Asn
>WENV180346051
OBLN01022602
284157
Euryarchaeota
CTG
Gln
>WENV180345788
OBLN01005538
156306
Euryarchaeota
CAT
Met
>WENV180346104
OBLN01026605
200227
Euryarchaeota
GAC
Val
>WENV180346507
OBLN01129339
421071
Euryarchaeota
CGT
Thr
>WENV180345437
OBLN01000103
413253
Euryarchaeota
GCC
Gly
>WENV180345814
OBLN01006483
413253
Euryarchaeota
GCC
Gly
>WENV180345431
OBLN01000080
284156
Euryarchaeota
GTC
Asp
>WENV180345736
OBLN01003705
158452
Euryarchaeota
GGG
Pro
>WENV180345490
OBLN01000332
400777
Euryarchaeota
>WENV180345963
OBLN01015277
197056
Euryarchaeota
TTT
Lys
>WENV180345657
OBLN01001944
301083
Euryarchaeota
>WENV180345377
OBLN01000002
156307
Euryarchaeota
>WENV180345468
OBLN01000235
156307
Euryarchaeota
>WENV180345573
OBLN01000698
58964
Euryarchaeota
GAG
Leu
>WENV180345574
OBLN01000698
58964
Euryarchaeota
GAG
Leu
>WENV180345633
OBLN01001325
102923
Euryarchaeota
GGA
Ser
>WENV180346295
OBLN01057333
156305
Euryarchaeota
CTC
Glu
>WENV180345700
OBLN01002885
58671
Euryarchaeota
TGA
Ser
>WENV180345641
OBLN01001499
179320
Euryarchaeota
>WENV180347068
OBLN01544410
179318
Euryarchaeota
GAT
Ile
>WENV180345445
OBLN01000133
179317
Euryarchaeota
CTT
Lys
>WENV180346341
OBLN01066560
179319
Euryarchaeota
>WENV180346440
OBLN01097962
400784
Euryarchaeota
TCC
Gly
>WENV180345442
OBLN01000129
400775
Euryarchaeota
GGC
Ala
>WENV180345918
OBLN01011206
179316
Euryarchaeota
TGT
Thr
>WENV180345825
OBLN01006905
409914
Euryarchaeota
CGC
Ala
>WENV180345459
OBLN01000197
400774
Euryarchaeota
GCC
Gly
>WENV180345426
OBLN01000070
156309
Euryarchaeota
TTC
Glu
>WENV180345427
OBLN01000070
156309
Euryarchaeota
TTC
Glu
>WENV180345428
OBLN01000070
156309
Euryarchaeota
TTC
Glu
>WENV180345464
OBLN01000213
148282
Euryarchaeota
CGA
Ser
>WENV180346541
OBLN01148828
196885
Euryarchaeota
TGT
Thr
>WENV180345424
OBLN01000067
211758
Euryarchaeota
CAC
Val
>WENV180345408
OBLN01000044
303461
Euryarchaeota
GTC
Asp
>WENV180345795
OBLN01005727
100280
Euryarchaeota
CAA
Leu
>WENV180345638
OBLN01001399
400778
Euryarchaeota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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