This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Microsporidia
HIT:
44 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.154942 (1 seq.)
>FG090100368
AL590445
Microsporidia
Encephalitozoon_cuniculi_GB-M1
87231
87313
+
Leu
TAA
[ENA]
¡û
Identical group No.178478 (1 seq.)
>FG090100360
AL590443
Microsporidia
Encephalitozoon_cuniculi_GB-M1
41045
41127
+
Ser
TGA
[ENA]
¡û
Identical group No.181905 (1 seq.)
>FG090100366
AL590444
Microsporidia
Encephalitozoon_cuniculi_GB-M1
119683
119602
-
Leu
CAA
[ENA]
¡û
Identical group No.201381 (1 seq.)
>FG090100385
AL590449
Microsporidia
Encephalitozoon_cuniculi_GB-M1
34328
34410
+
Ser
GCT
[ENA]
¡û
Identical group No.205475 (1 seq.)
>FG090100357
AL590442
Microsporidia
Encephalitozoon_cuniculi_GB-M1
179296
179377
+
Leu
AAG
[ENA]
¡û
Identical group No.205476 (1 seq.)
>FG090100359
AL590442
Microsporidia
Encephalitozoon_cuniculi_GB-M1
62756
62675
-
Ser
CGA
[ENA]
¡û
Identical group No.225500 (1 seq.)
>FG090100392
AL590450
Microsporidia
Encephalitozoon_cuniculi_GB-M1
53750
53670
-
Leu
TAG
[ENA]
¡û
Identical group No.226877 (1 seq.)
>FG090100377
AL590447
Microsporidia
Encephalitozoon_cuniculi_GB-M1
113069
112989
-
Leu
CAG
[ENA]
¡û
Identical group No.280944 (1 seq.)
>FG090100364
AL590444
Microsporidia
Encephalitozoon_cuniculi_GB-M1
25454
25528
+
Ile
AAT
[ENA]
¡û
Identical group No.280945 (1 seq.)
>FG090100367
AL590444
Microsporidia
Encephalitozoon_cuniculi_GB-M1
22702
22629
-
Lys
CTT
[ENA]
¡û
Identical group No.280946 (1 seq.)
>FG090800069
AL590444
Microsporidia
Encephalitozoon_cuniculi_GB-M1
57467
57581
+
Ile
TAT
[ENA]
¡û
Identical group No.462482 (1 seq.)
>FG090100369
AL590445
Microsporidia
Encephalitozoon_cuniculi_GB-M1
118514
118587
+
Thr
AGT
[ENA]
¡û
Identical group No.541140 (1 seq.)
>FG090100371
AL590446
Microsporidia
Encephalitozoon_cuniculi_GB-M1
165236
165308
+
Arg
ACG
[ENA]
¡û
Identical group No.564721 (1 seq.)
>FG090100388
AL590449
Microsporidia
Encephalitozoon_cuniculi_GB-M1
21671
21599
-
Val
CAC
[ENA]
¡û
Identical group No.564722 (1 seq.)
>FG090100389
AL590449
Microsporidia
Encephalitozoon_cuniculi_GB-M1
17842
17770
-
Asn
GTT
[ENA]
¡û
Identical group No.575239 (1 seq.)
>FG090100393
AL590451
Microsporidia
Encephalitozoon_cuniculi_GB-M1
158716
158788
+
Arg
CCT
[ENA]
¡û
Identical group No.586969 (1 seq.)
>FG090100380
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
107288
107360
+
Val
AAC
[ENA]
¡û
Identical group No.586970 (1 seq.)
>FG090100381
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
213588
213660
+
Asn
GTT
[ENA]
¡û
Identical group No.586971 (1 seq.)
>FG090100382
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
200355
200281
-
Thr
TGT
[ENA]
¡û
Identical group No.586972 (1 seq.)
>FG090100383
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
79525
79453
-
Arg
TCT
[ENA]
¡û
Identical group No.597162 (1 seq.)
>FG090100390
AL590450
Microsporidia
Encephalitozoon_cuniculi_GB-M1
57751
57823
+
Met
CAT
[ENA]
¡û
Identical group No.622058 (1 seq.)
>FG090100375
AL590447
Microsporidia
Encephalitozoon_cuniculi_GB-M1
172081
172153
+
Lys
TTT
[ENA]
¡û
Identical group No.641864 (1 seq.)
>FG090100361
AL590443
Microsporidia
Encephalitozoon_cuniculi_GB-M1
152612
152684
+
Val
TAC
[ENA]
¡û
Identical group No.641865 (1 seq.)
>FG090100363
AL590443
Microsporidia
Encephalitozoon_cuniculi_GB-M1
44699
44627
-
Asp
GTC
[ENA]
¡û
Identical group No.659362 (1 seq.)
>FG090100365
AL590444
Microsporidia
Encephalitozoon_cuniculi_GB-M1
182891
182962
+
Pro
TGG
[ENA]
¡û
Identical group No.706726 (1 seq.)
>FG090100354
AL391737
Microsporidia
Encephalitozoon_cuniculi_GB-M1
55599
55671
+
Gly
TCC
[ENA]
¡û
Identical group No.706727 (1 seq.)
>FG090100370
AL590446
Microsporidia
Encephalitozoon_cuniculi_GB-M1
120887
120959
+
Trp
CCA
[ENA]
¡û
Identical group No.706728 (1 seq.)
>FG090100372
AL590446
Microsporidia
Encephalitozoon_cuniculi_GB-M1
201539
201610
+
Gln
CTG
[ENA]
¡û
Identical group No.728026 (1 seq.)
>FG090100394
AL590451
Microsporidia
Encephalitozoon_cuniculi_GB-M1
210542
210613
+
Glu
TTC
[ENA]
¡û
Identical group No.735075 (1 seq.)
>FG090100356
AL590442
Microsporidia
Encephalitozoon_cuniculi_GB-M1
104134
104205
+
Pro
AGG
[ENA]
¡û
Identical group No.735076 (1 seq.)
>FG090100379
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
68208
68281
+
Cys
GCA
[ENA]
¡û
Identical group No.735077 (1 seq.)
>FG090100384
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
32736
32665
-
Glu
CTC
[ENA]
¡û
Identical group No.735084 (1 seq.)
>FG090800070
AL590448
Microsporidia
Encephalitozoon_cuniculi_GB-M1
107482
107399
-
Tyr
GTA
[ENA]
¡û
Identical group No.741429 (1 seq.)
>FG090100391
AL590450
Microsporidia
Encephalitozoon_cuniculi_GB-M1
158598
158669
+
Gly
CCC
[ENA]
¡û
Identical group No.757495 (1 seq.)
>FG090100376
AL590447
Microsporidia
Encephalitozoon_cuniculi_GB-M1
177782
177853
+
Ala
AGC
[ENA]
¡û
Identical group No.757496 (1 seq.)
>FG090100378
AL590447
Microsporidia
Encephalitozoon_cuniculi_GB-M1
32167
32095
-
Gln
TTG
[ENA]
¡û
Identical group No.772263 (1 seq.)
>FG090100362
AL590443
Microsporidia
Encephalitozoon_cuniculi_GB-M1
132248
132177
-
Phe
GAA
[ENA]
¡û
Identical group No.803298 (1 seq.)
>FG090100373
AL590446
Microsporidia
Encephalitozoon_cuniculi_GB-M1
54370
54300
-
Gly
GCC
[ENA]
¡û
Identical group No.810059 (1 seq.)
>FG090100386
AL590449
Microsporidia
Encephalitozoon_cuniculi_GB-M1
55869
55939
+
Pro
CGG
[ENA]
¡û
Identical group No.810060 (1 seq.)
>FG090100387
AL590449
Microsporidia
Encephalitozoon_cuniculi_GB-M1
147667
147738
+
Ala
CGC
[ENA]
¡û
Identical group No.813226 (1 seq.)
>FG090100395
AL590451
Microsporidia
Encephalitozoon_cuniculi_GB-M1
221638
221708
+
His
GTG
[ENA]
¡û
Identical group No.816405 (1 seq.)
>FG090100355
AL590442
Microsporidia
Encephalitozoon_cuniculi_GB-M1
63208
63280
+
Thr
CGT
[ENA]
¡û
Identical group No.816406 (1 seq.)
>FG090100358
AL590442
Microsporidia
Encephalitozoon_cuniculi_GB-M1
117723
117653
-
Ala
TGC
[ENA]
¡û
Identical group No.826664 (1 seq.)
>FG090100374
AL590447
Microsporidia
Encephalitozoon_cuniculi_GB-M1
171161
171231
+
Arg
TCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK