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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
167 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183557679
OOBP01003127
24650
Bacillota
TAA
Leu
>WENV183557634
OOBP01002264
243647
Bacillota
TTT
Lys
>WENV183557313
OOBP01000297
196621
Bacillota
GTC
Asp
>WENV183557400
OOBP01000511
196621
Bacillota
GTC
Asp
>WENV183557512
OOBP01001067
196621
Bacillota
GTC
Asp
>WENV183557540
OOBP01001221
196621
Bacillota
GTC
Asp
>WENV183557653
OOBP01002644
196621
Bacillota
GTC
Asp
>WENV183557699
OOBP01003522
196621
Bacillota
GTC
Asp
>WENV183557464
OOBP01000828
16842
Bacillota
CGA
Ser
>WENV183557484
OOBP01000960
37213
Bacillota
TGA
Ser
>WENV183557818
OOBP01010226
37213
Bacillota
TGA
Ser
>WENV183557819
OOBP01010226
37213
Bacillota
TGA
Ser
>WENV183557395
OOBP01000505
144612
Bacillota
TCT
Arg
>WENV183556982
OOBP01000002
267649
Bacillota
TAC
Val
>WENV183557686
OOBP01003308
235134
Bacillota
GAA
Phe
>WENV183557703
OOBP01003835
235098
Bacillota
GAC
Val
>WENV183557619
OOBP01002004
235098
Bacillota
GAC
Val
>WENV183557429
OOBP01000675
235098
Bacillota
GAC
Val
>WENV183557425
OOBP01000654
235098
Bacillota
GAC
Val
>WENV183557346
OOBP01000338
235098
Bacillota
GAC
Val
>WENV183557257
OOBP01000210
235098
Bacillota
GAC
Val
>WENV183557947
OOBP01034158
338152
Bacillota
TTC
Glu
>WENV183557525
OOBP01001128
148239
Bacillota
TCT
Arg
>WENV183557756
OOBP01005673
44854
Bacillota
TGA
Ser
>WENV183557664
OOBP01002795
44854
Bacillota
TGA
Ser
>WENV183557185
OOBP01000138
44854
Bacillota
TGA
Ser
>WENV183557469
OOBP01000867
241441
Bacillota
GCC
Gly
>WENV183557859
OOBP01016040
246023
Bacillota
TGC
Ala
>WENV183557972
OOBP01043284
238910
Bacillota
CTT
Lys
>WENV183557911
OOBP01023892
235150
Bacillota
TGC
Ala
>WENV183557894
OOBP01020352
235150
Bacillota
TGC
Ala
>WENV183557976
OOBP01043655
235137
Bacillota
TGC
Ala
>WENV183557971
OOBP01043014
235137
Bacillota
TGC
Ala
>WENV183557776
OOBP01006310
340802
Bacillota
TTG
Gln
>WENV183557384
OOBP01000461
428544
Bacillota
GCA
Cys
>WENV183557436
OOBP01000707
341763
Bacillota
CTC
Glu
>WENV183557957
OOBP01038496
144668
Bacillota
GTC
Asp
>WENV183557677
OOBP01003127
144668
Bacillota
GTC
Asp
>WENV183556992
OOBP01000003
429429
Bacillota
CCA
Trp
>WENV183557744
OOBP01005038
41154
Bacillota
TAA
Leu
>WENV183557722
OOBP01003917
16834
Bacillota
GCT
Ser
>WENV183557731
OOBP01004235
11034
Bacillota
GGA
Ser
>WENV183557312
OOBP01000296
11034
Bacillota
GGA
Ser
>WENV183557200
OOBP01000155
11034
Bacillota
GGA
Ser
>WENV183557914
OOBP01024177
247057
Bacillota
TGC
Ala
>WENV183557490
OOBP01000971
338440
Bacillota
TTC
Glu
>WENV183557526
OOBP01001128
156937
Bacillota
GTG
His
>WENV183557550
OOBP01001267
274189
Bacillota
TGT
Thr
>WENV183557804
OOBP01007853
37437
Bacillota
TAA
Leu
>WENV183557697
OOBP01003522
235079
Bacillota
GAA
Phe
>WENV183557538
OOBP01001221
235079
Bacillota
GAA
Phe
>WENV183557513
OOBP01001067
235079
Bacillota
GAA
Phe
>WENV183557314
OOBP01000297
235079
Bacillota
GAA
Phe
>WENV183557759
OOBP01005709
173314
Bacillota
GAT
Ile
>WENV183557640
OOBP01002264
243612
Bacillota
TAC
Val
>WENV183557636
OOBP01002264
243612
Bacillota
TAC
Val
>WENV183557495
OOBP01000972
149041
Bacillota
GTC
Asp
>WENV183557949
OOBP01035383
338149
Bacillota
CTC
Glu
>WENV183557728
OOBP01003968
338149
Bacillota
CTC
Glu
>WENV183557692
OOBP01003454
338149
Bacillota
CTC
Glu
>WENV183557306
OOBP01000290
338149
Bacillota
CTC
Glu
>WENV183557190
OOBP01000142
338149
Bacillota
CTC
Glu
>WENV183557383
OOBP01000461
271471
Bacillota
GCC
Gly
>WENV183557663
OOBP01002742
245298
Bacillota
CGG
Pro
>WENV183557590
OOBP01001561
245298
Bacillota
CGG
Pro
>WENV183557178
OOBP01000127
245298
Bacillota
CGG
Pro
>WENV183557901
OOBP01022645
37269
Bacillota
TGA
Ser
>WENV183557280
OOBP01000245
169968
Bacillota
CAT
Met
>WENV183557674
OOBP01003072
413152
Bacillota
TCC
Gly
>WENV183557610
OOBP01001740
162445
Bacillota
CAT
Met
>WENV183557608
OOBP01001740
162445
Bacillota
CAT
Met
>WENV183557413
OOBP01000562
152492
Bacillota
GGG
Pro
>WENV183557889
OOBP01020015
144599
Bacillota
GTC
Asp
>WENV183557775
OOBP01006310
144610
Bacillota
GTG
His
>WENV183557926
OOBP01025518
411547
Bacillota
CTG
Gln
>WENV183557662
OOBP01002742
411547
Bacillota
CTG
Gln
>WENV183557589
OOBP01001561
411547
Bacillota
CTG
Gln
>WENV183557475
OOBP01000901
411547
Bacillota
CTG
Gln
>WENV183557433
OOBP01000698
411547
Bacillota
CTG
Gln
>WENV183557177
OOBP01000127
411547
Bacillota
CTG
Gln
>WENV183557069
OOBP01000035
411547
Bacillota
CTG
Gln
>WENV183557368
OOBP01000412
147684
Bacillota
ACG
Arg
>WENV183557757
OOBP01005673
4624
Bacillota
GCT
Ser
>WENV183557665
OOBP01002795
4624
Bacillota
GCT
Ser
>WENV183557186
OOBP01000138
4624
Bacillota
GCT
Ser
>WENV183557442
OOBP01000713
263765
Bacillota
TAC
Val
>WENV183557381
OOBP01000461
263765
Bacillota
TAC
Val
>WENV183557817
OOBP01010183
342895
Bacillota
CAT
Met
>WENV183557839
OOBP01013750
412387
Bacillota
GCA
Cys
>WENV183557824
OOBP01010635
412387
Bacillota
GCA
Cys
>WENV183557916
OOBP01024825
254697
Bacillota
TTT
Lys
>WENV183557823
OOBP01010517
18852
Bacillota
GCT
Ser
>WENV183557402
OOBP01000511
235095
Bacillota
GGT
Thr
>WENV183557401
OOBP01000511
235095
Bacillota
GGT
Thr
>WENV183557390
OOBP01000490
235095
Bacillota
GGT
Thr
>WENV183557654
OOBP01002644
235095
Bacillota
GGT
Thr
>WENV183557547
OOBP01001259
235095
Bacillota
GGT
Thr
>WENV183557493
OOBP01000972
239832
Bacillota
TGT
Thr
>WENV183557913
OOBP01023999
250349
Bacillota
GAA
Phe
>WENV183557575
OOBP01001456
411549
Bacillota
TTG
Gln
>WENV183557385
OOBP01000465
411549
Bacillota
TTG
Gln
>WENV183557176
OOBP01000127
411549
Bacillota
TTG
Gln
>WENV183557955
OOBP01036707
235701
Bacillota
TTT
Lys
>WENV183557975
OOBP01043284
245386
Bacillota
CCA
Trp
>WENV183557626
OOBP01002200
148188
Bacillota
CCG
Arg
>WENV183557365
OOBP01000407
148188
Bacillota
CCG
Arg
>WENV183557543
OOBP01001221
80612
Bacillota
GTA
Tyr
>WENV183557912
OOBP01023999
235197
Bacillota
GTC
Asp
>WENV183557802
OOBP01007853
368876
Bacillota
GCC
Gly
>WENV183557637
OOBP01002264
368876
Bacillota
GCC
Gly
>WENV183557632
OOBP01002264
368876
Bacillota
GCC
Gly
>WENV183557655
OOBP01002708
241432
Bacillota
TGT
Thr
>WENV183557392
OOBP01000504
241432
Bacillota
TGT
Thr
>WENV183557733
OOBP01004280
235124
Bacillota
TGG
Pro
>WENV183557651
OOBP01002614
235124
Bacillota
TGG
Pro
>WENV183557263
OOBP01000220
235124
Bacillota
TGG
Pro
>WENV183557258
OOBP01000210
235124
Bacillota
TGG
Pro
>WENV183557890
OOBP01020015
254433
Bacillota
TAC
Val
>WENV183557658
OOBP01002708
254433
Bacillota
TAC
Val
>WENV183557650
OOBP01002609
254433
Bacillota
TAC
Val
>WENV183557645
OOBP01002410
254433
Bacillota
TAC
Val
>WENV183557351
OOBP01000346
338129
Bacillota
TGT
Thr
>WENV183557317
OOBP01000305
338129
Bacillota
TGT
Thr
>WENV183557064
OOBP01000032
338129
Bacillota
TGT
Thr
>WENV183557953
OOBP01036707
243613
Bacillota
GTG
His
>WENV183557029
OOBP01000012
149274
Bacillota
>WENV183557785
OOBP01006628
144583
Bacillota
ACG
Arg
>WENV183557574
OOBP01001441
144583
Bacillota
ACG
Arg
>WENV183557488
OOBP01000967
144583
Bacillota
ACG
Arg
>WENV183557486
OOBP01000962
144583
Bacillota
ACG
Arg
>WENV183557967
OOBP01040895
144672
Bacillota
TCT
Arg
>WENV183557867
OOBP01016736
419877
Bacillota
TCC
Gly
>WENV183557399
OOBP01000511
235171
Bacillota
CCA
Trp
>WENV183557729
OOBP01003968
144621
Bacillota
GTT
Asn
>WENV183557601
OOBP01001710
144621
Bacillota
GTT
Asn
>WENV183557307
OOBP01000290
144621
Bacillota
GTT
Asn
>WENV183557302
OOBP01000285
144621
Bacillota
GTT
Asn
>WENV183557191
OOBP01000142
144621
Bacillota
GTT
Asn
>WENV183557852
OOBP01014515
152491
Bacillota
CAT
Met
>WENV183557929
OOBP01026561
58712
Bacillota
CAG
Leu
>WENV183557730
OOBP01004121
58712
Bacillota
CAG
Leu
>WENV183557680
OOBP01003152
58712
Bacillota
CAG
Leu
>WENV183557554
OOBP01001287
58712
Bacillota
CAG
Leu
>WENV183557412
OOBP01000560
58712
Bacillota
CAG
Leu
>WENV183557289
OOBP01000259
58712
Bacillota
CAG
Leu
>WENV183557426
OOBP01000666
245296
Bacillota
CCC
Gly
>WENV183557068
OOBP01000035
245296
Bacillota
CCC
Gly
>WENV183557950
OOBP01035383
272992
Bacillota
CTT
Lys
>WENV183557898
OOBP01021575
272992
Bacillota
CTT
Lys
>WENV183557833
OOBP01013340
272992
Bacillota
CTT
Lys
>WENV183557693
OOBP01003454
272992
Bacillota
CTT
Lys
>WENV183557848
OOBP01014515
273029
Bacillota
TGT
Thr
>WENV183557851
OOBP01014515
281472
Bacillota
GGT
Thr
>WENV183557755
OOBP01005519
144594
Bacillota
CAC
Val
>WENV183557624
OOBP01002158
144594
Bacillota
CAC
Val
>WENV183557563
OOBP01001317
144594
Bacillota
CAC
Val
>WENV183557556
OOBP01001295
144594
Bacillota
CAC
Val
>WENV183557343
OOBP01000335
272488
Bacillota
GAA
Phe
>WENV183557281
OOBP01000245
272488
Bacillota
GAA
Phe
>WENV183557794
OOBP01007316
238945
Bacillota
GCC
Gly
>WENV183557622
OOBP01002058
238945
Bacillota
GCC
Gly
>WENV183557638
OOBP01002264
287034
Bacillota
GTT
Asn
>WENV183557633
OOBP01002264
287034
Bacillota
GTT
Asn
>WENV183557771
OOBP01006236
273862
Bacillota
TGC
Ala
>WENV183557954
OOBP01036707
343027
Bacillota
TTG
Gln
>WENV183557367
OOBP01000407
338128
Bacillota
TTC
Glu
>WENV183557360
OOBP01000372
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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