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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
167 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183589480
OOCW01001071
196621
Bacillota
GTC
Asp
>WENV183589655
OOCW01002471
196621
Bacillota
GTC
Asp
>WENV183589927
OOCW01016516
196621
Bacillota
GTC
Asp
>WENV183589341
OOCW01000473
309417
Bacillota
GGC
Ala
>WENV183589753
OOCW01004841
309417
Bacillota
GGC
Ala
>WENV183589636
OOCW01002217
37213
Bacillota
TGA
Ser
>WENV183589528
OOCW01001282
144612
Bacillota
TCT
Arg
>WENV183589642
OOCW01002292
144612
Bacillota
TCT
Arg
>WENV183589702
OOCW01003240
144612
Bacillota
TCT
Arg
>WENV183589798
OOCW01006743
144612
Bacillota
TCT
Arg
>WENV183589932
OOCW01017026
144612
Bacillota
TCT
Arg
>WENV183589360
OOCW01000571
235287
Bacillota
TTT
Lys
>WENV183590043
OOCW01049284
18465
Bacillota
GCT
Ser
>WENV183589860
OOCW01009619
235098
Bacillota
GAC
Val
>WENV183589749
OOCW01004574
235098
Bacillota
GAC
Val
>WENV183589436
OOCW01000905
235098
Bacillota
GAC
Val
>WENV183589475
OOCW01001062
98228
Bacillota
TAG
Leu
>WENV183589804
OOCW01006993
37089
Bacillota
TAA
Leu
>WENV183589796
OOCW01006716
44854
Bacillota
TGA
Ser
>WENV183589709
OOCW01003443
44854
Bacillota
TGA
Ser
>WENV183589521
OOCW01001253
44854
Bacillota
TGA
Ser
>WENV183589391
OOCW01000689
44854
Bacillota
TGA
Ser
>WENV183589861
OOCW01009757
146697
Bacillota
ACG
Arg
>WENV183589900
OOCW01012900
237285
Bacillota
TGT
Thr
>WENV183589925
OOCW01016516
304022
Bacillota
GCC
Gly
>WENV183589969
OOCW01025559
429443
Bacillota
GCA
Cys
>WENV183589864
OOCW01009806
295019
Bacillota
TGC
Ala
>WENV183589295
OOCW01000328
59312
Bacillota
CAG
Leu
>WENV183589770
OOCW01005528
238910
Bacillota
CTT
Lys
>WENV183589287
OOCW01000315
97943
Bacillota
GTA
Tyr
>WENV183589159
OOCW01000090
338147
Bacillota
CTC
Glu
>WENV183589050
OOCW01000010
338147
Bacillota
CTC
Glu
>WENV183589049
OOCW01000010
338147
Bacillota
CTC
Glu
>WENV183589953
OOCW01021563
235150
Bacillota
TGC
Ala
>WENV183589833
OOCW01008308
340802
Bacillota
TTG
Gln
>WENV183589263
OOCW01000260
293599
Bacillota
CTT
Lys
>WENV183589590
OOCW01001719
388249
Bacillota
GCA
Cys
>WENV183589848
OOCW01009035
344203
Bacillota
GCC
Gly
>WENV183589593
OOCW01001726
429429
Bacillota
CCA
Trp
>WENV183589298
OOCW01000350
429429
Bacillota
CCA
Trp
>WENV183589361
OOCW01000571
379268
Bacillota
TTC
Glu
>WENV183589649
OOCW01002373
186380
Bacillota
GTC
Asp
>WENV183589762
OOCW01005107
11034
Bacillota
GGA
Ser
>WENV183589741
OOCW01004414
11034
Bacillota
GGA
Ser
>WENV183589658
OOCW01002477
11034
Bacillota
GGA
Ser
>WENV183589498
OOCW01001125
11034
Bacillota
GGA
Ser
>WENV183589926
OOCW01016516
235117
Bacillota
TAC
Val
>WENV183589718
OOCW01003656
338550
Bacillota
>WENV183589928
OOCW01016516
235079
Bacillota
GAA
Phe
>WENV183589352
OOCW01000542
162028
Bacillota
ACG
Arg
>WENV183589351
OOCW01000542
162028
Bacillota
ACG
Arg
>WENV183589803
OOCW01006993
146698
Bacillota
CAT
Met
>WENV183589621
OOCW01002114
149041
Bacillota
GTC
Asp
>WENV183589821
OOCW01007707
338149
Bacillota
CTC
Glu
>WENV183589732
OOCW01004089
338149
Bacillota
CTC
Glu
>WENV183589661
OOCW01002530
245298
Bacillota
CGG
Pro
>WENV183589563
OOCW01001526
245298
Bacillota
CGG
Pro
>WENV183589986
OOCW01030300
380750
Bacillota
TGT
Thr
>WENV183589063
OOCW01000016
37269
Bacillota
TGA
Ser
>WENV183590008
OOCW01035272
340131
Bacillota
GTT
Asn
>WENV183589638
OOCW01002220
155089
Bacillota
CAT
Met
>WENV183589355
OOCW01000560
258936
Bacillota
GGT
Thr
>WENV183589228
OOCW01000204
173810
Bacillota
CAT
Met
>WENV183589533
OOCW01001307
152492
Bacillota
GGG
Pro
>WENV183589020
OOCW01000001
152492
Bacillota
GGG
Pro
>WENV183589895
OOCW01012363
339364
Bacillota
TTG
Gln
>WENV183589629
OOCW01002151
100326
Bacillota
GTA
Tyr
>WENV183589141
OOCW01000082
100326
Bacillota
GTA
Tyr
>WENV183589091
OOCW01000037
100326
Bacillota
GTA
Tyr
>WENV183589832
OOCW01008308
144610
Bacillota
GTG
His
>WENV183589329
OOCW01000452
353537
Bacillota
GTT
Asn
>WENV183589950
OOCW01021058
411547
Bacillota
CTG
Gln
>WENV183589816
OOCW01007500
411547
Bacillota
CTG
Gln
>WENV183589660
OOCW01002530
411547
Bacillota
CTG
Gln
>WENV183589641
OOCW01002281
411547
Bacillota
CTG
Gln
>WENV183589610
OOCW01002030
411547
Bacillota
CTG
Gln
>WENV183589600
OOCW01001851
411547
Bacillota
CTG
Gln
>WENV183589562
OOCW01001526
411547
Bacillota
CTG
Gln
>WENV183589906
OOCW01014542
147684
Bacillota
ACG
Arg
>WENV183589724
OOCW01003903
147684
Bacillota
ACG
Arg
>WENV183589519
OOCW01001233
147684
Bacillota
ACG
Arg
>WENV183589125
OOCW01000063
147684
Bacillota
ACG
Arg
>WENV183589710
OOCW01003443
4624
Bacillota
GCT
Ser
>WENV183589522
OOCW01001253
4624
Bacillota
GCT
Ser
>WENV183589392
OOCW01000689
4624
Bacillota
GCT
Ser
>WENV183589797
OOCW01006716
4624
Bacillota
GCT
Ser
>WENV183589290
OOCW01000315
263765
Bacillota
TAC
Val
>WENV183589187
OOCW01000124
263765
Bacillota
TAC
Val
>WENV183590032
OOCW01045062
412387
Bacillota
GCA
Cys
>WENV183589842
OOCW01008616
339362
Bacillota
GTT
Asn
>WENV183589731
OOCW01004046
411584
Bacillota
TCC
Gly
>WENV183589656
OOCW01002471
235095
Bacillota
GGT
Thr
>WENV183589481
OOCW01001071
235095
Bacillota
GGT
Thr
>WENV183589478
OOCW01001071
235095
Bacillota
GGT
Thr
>WENV183589384
OOCW01000676
235095
Bacillota
GGT
Thr
>WENV183589619
OOCW01002114
239832
Bacillota
TGT
Thr
>WENV183589681
OOCW01002808
198159
Bacillota
CAT
Met
>WENV183589279
OOCW01000314
198159
Bacillota
CAT
Met
>WENV183589663
OOCW01002532
37193
Bacillota
TAA
Leu
>WENV183589422
OOCW01000804
65679
Bacillota
TAA
Leu
>WENV183589539
OOCW01001355
235289
Bacillota
GTT
Asn
>WENV183589765
OOCW01005465
411549
Bacillota
TTG
Gln
>WENV183589589
OOCW01001704
411549
Bacillota
TTG
Gln
>WENV183589561
OOCW01001526
411549
Bacillota
TTG
Gln
>WENV183589873
OOCW01010319
148188
Bacillota
CCG
Arg
>WENV183589756
OOCW01004874
148188
Bacillota
CCG
Arg
>WENV183589653
OOCW01002445
148188
Bacillota
CCG
Arg
>WENV183589513
OOCW01001202
256380
Bacillota
>WENV183589255
OOCW01000248
256380
Bacillota
>WENV183589849
OOCW01009035
411739
Bacillota
TCC
Gly
>WENV183589398
OOCW01000708
411739
Bacillota
TCC
Gly
>WENV183589338
OOCW01000472
411739
Bacillota
TCC
Gly
>WENV183589226
OOCW01000199
411739
Bacillota
TCC
Gly
>WENV183589894
OOCW01012363
237287
Bacillota
GTG
His
>WENV183589806
OOCW01007081
235638
Bacillota
GAA
Phe
>WENV183589787
OOCW01006250
235638
Bacillota
GAA
Phe
>WENV183589938
OOCW01017644
235124
Bacillota
TGG
Pro
>WENV183589795
OOCW01006657
235124
Bacillota
TGG
Pro
>WENV183589752
OOCW01004833
235124
Bacillota
TGG
Pro
>WENV183589682
OOCW01002808
235506
Bacillota
TGC
Ala
>WENV183589793
OOCW01006569
237963
Bacillota
TTT
Lys
>WENV183589402
OOCW01000708
237963
Bacillota
TTT
Lys
>WENV183589340
OOCW01000472
237963
Bacillota
TTT
Lys
>WENV183589399
OOCW01000708
201667
Bacillota
TCT
Arg
>WENV183589339
OOCW01000472
201667
Bacillota
TCT
Arg
>WENV183589829
OOCW01008206
338129
Bacillota
TGT
Thr
>WENV183589686
OOCW01002835
338129
Bacillota
TGT
Thr
>WENV183589343
OOCW01000488
338129
Bacillota
TGT
Thr
>WENV183589400
OOCW01000708
279635
Bacillota
GTG
His
>WENV183589728
OOCW01003919
148446
Bacillota
TCT
Arg
>WENV183589604
OOCW01001928
144583
Bacillota
ACG
Arg
>WENV183589669
OOCW01002630
144672
Bacillota
TCT
Arg
>WENV183589138
OOCW01000082
144652
Bacillota
GTC
Asp
>WENV183589654
OOCW01002471
235171
Bacillota
CCA
Trp
>WENV183589479
OOCW01001071
235171
Bacillota
CCA
Trp
>WENV183589265
OOCW01000268
238974
Bacillota
GAA
Phe
>WENV183589822
OOCW01007707
144621
Bacillota
GTT
Asn
>WENV183589818
OOCW01007603
144621
Bacillota
GTT
Asn
>WENV183589733
OOCW01004089
144621
Bacillota
GTT
Asn
>WENV183589677
OOCW01002686
144621
Bacillota
GTT
Asn
>WENV183589893
OOCW01012363
145469
Bacillota
TCT
Arg
>WENV183589823
OOCW01007777
353527
Bacillota
TTC
Glu
>WENV183589337
OOCW01000472
353527
Bacillota
TTC
Glu
>WENV183589186
OOCW01000124
353527
Bacillota
TTC
Glu
>WENV183589549
OOCW01001463
58712
Bacillota
CAG
Leu
>WENV183589773
OOCW01005640
58712
Bacillota
CAG
Leu
>WENV183589644
OOCW01002292
58712
Bacillota
CAG
Leu
>WENV183589705
OOCW01003367
144762
Bacillota
TCT
Arg
>WENV183589990
OOCW01031433
170245
Bacillota
CAT
Met
>WENV183589599
OOCW01001845
170245
Bacillota
CAT
Met
>WENV183589810
OOCW01007252
245296
Bacillota
CCC
Gly
>WENV183589541
OOCW01001403
245296
Bacillota
CCC
Gly
>WENV183589535
OOCW01001326
245296
Bacillota
CCC
Gly
>WENV183589831
OOCW01008308
157635
Bacillota
TCT
Arg
>WENV183590050
OOCW01051746
339361
Bacillota
CCT
Arg
>WENV183589836
OOCW01008373
299139
Bacillota
TGC
Ala
>WENV183589867
OOCW01009993
144594
Bacillota
CAC
Val
>WENV183589776
OOCW01005818
144594
Bacillota
CAC
Val
>WENV183589059
OOCW01000015
414486
Bacillota
CCC
Gly
>WENV183589717
OOCW01003641
272488
Bacillota
GAA
Phe
>WENV183589523
OOCW01001257
114075
Bacillota
TAG
Leu
>WENV183589473
OOCW01001054
114075
Bacillota
TAG
Leu
>WENV183589626
OOCW01002148
146770
Bacillota
TTC
Glu
>WENV183589354
OOCW01000560
376360
Bacillota
GCA
Cys
>WENV183589564
OOCW01001530
338131
Bacillota
GCC
Gly
>WENV183589701
OOCW01003232
338128
Bacillota
TTC
Glu
>WENV183589377
OOCW01000626
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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