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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183647226
OQVS01000099
344240
Bacillota
GCC
Gly
>WENV183647225
OQVS01000099
196632
Bacillota
GTC
Asp
>WENV183647224
OQVS01000099
178024
Bacillota
TCT
Arg
>WENV183647277
OQVS01000199
347851
Bacillota
TTC
Glu
>WENV183647368
OQVS01000474
248965
Bacillota
GCC
Gly
>WENV183647444
OQVS01000718
341796
Bacillota
CCG
Arg
>WENV183647534
OQVS01001145
236037
Bacillota
GTG
His
>WENV183647576
OQVS01001373
95563
Bacillota
GTA
Tyr
>WENV183647605
OQVS01001555
240017
Bacillota
GCC
Gly
>WENV183647602
OQVS01001555
263765
Bacillota
TAC
Val
>WENV183647603
OQVS01001555
157838
Bacillota
GTC
Asp
>WENV183647632
OQVS01001691
235114
Bacillota
TTT
Lys
>WENV183647630
OQVS01001691
144610
Bacillota
GTG
His
>WENV183647684
OQVS01001998
178024
Bacillota
TCT
Arg
>WENV183647691
OQVS01002031
352996
Bacillota
TTC
Glu
>WENV183647727
OQVS01002240
37269
Bacillota
TGA
Ser
>WENV183647763
OQVS01002494
274189
Bacillota
TGT
Thr
>WENV183647777
OQVS01002604
144612
Bacillota
TCT
Arg
>WENV183647785
OQVS01002679
169968
Bacillota
CAT
Met
>WENV183647786
OQVS01002679
272488
Bacillota
GAA
Phe
>WENV183647795
OQVS01002807
144583
Bacillota
ACG
Arg
>WENV183647796
OQVS01002832
235124
Bacillota
TGG
Pro
>WENV183647802
OQVS01002963
272992
Bacillota
CTT
Lys
>WENV183647817
OQVS01003127
338147
Bacillota
CTC
Glu
>WENV183647819
OQVS01003135
144612
Bacillota
TCT
Arg
>WENV183647860
OQVS01003603
338147
Bacillota
CTC
Glu
>WENV183647871
OQVS01003706
411547
Bacillota
CTG
Gln
>WENV183647876
OQVS01003779
338147
Bacillota
CTC
Glu
>WENV183647878
OQVS01003805
295714
Bacillota
GCC
Gly
>WENV183647884
OQVS01003844
344240
Bacillota
GCC
Gly
>WENV183647883
OQVS01003844
196632
Bacillota
GTC
Asp
>WENV183647889
OQVS01003920
295714
Bacillota
GCC
Gly
>WENV183647930
OQVS01004460
58712
Bacillota
CAG
Leu
>WENV183647972
OQVS01005089
144621
Bacillota
GTT
Asn
>WENV183647982
OQVS01005209
80612
Bacillota
GTA
Tyr
>WENV183647984
OQVS01005225
37071
Bacillota
TGA
Ser
>WENV183647985
OQVS01005227
58712
Bacillota
CAG
Leu
>WENV183647988
OQVS01005286
235095
Bacillota
GGT
Thr
>WENV183647991
OQVS01005353
235124
Bacillota
TGG
Pro
>WENV183647999
OQVS01005422
245298
Bacillota
CGG
Pro
>WENV183647998
OQVS01005422
411547
Bacillota
CTG
Gln
>WENV183648005
OQVS01005493
59312
Bacillota
CAG
Leu
>WENV183648011
OQVS01005585
344240
Bacillota
GCC
Gly
>WENV183648022
OQVS01005776
344240
Bacillota
GCC
Gly
>WENV183648042
OQVS01006010
263765
Bacillota
TAC
Val
>WENV183648083
OQVS01006516
411549
Bacillota
TTG
Gln
>WENV183648102
OQVS01006905
148239
Bacillota
TCT
Arg
>WENV183648103
OQVS01006905
156937
Bacillota
GTG
His
>WENV183648104
OQVS01007023
411549
Bacillota
TTG
Gln
>WENV183648149
OQVS01007735
235079
Bacillota
GAA
Phe
>WENV183648155
OQVS01007915
58712
Bacillota
CAG
Leu
>WENV183648164
OQVS01008002
411549
Bacillota
TTG
Gln
>WENV183648168
OQVS01008063
235124
Bacillota
TGG
Pro
>WENV183648191
OQVS01008361
144621
Bacillota
GTT
Asn
>WENV183648195
OQVS01008449
11034
Bacillota
GGA
Ser
>WENV183648205
OQVS01008815
235124
Bacillota
TGG
Pro
>WENV183648211
OQVS01009050
338149
Bacillota
CTC
Glu
>WENV183648212
OQVS01009050
144621
Bacillota
GTT
Asn
>WENV183648214
OQVS01009098
235098
Bacillota
GAC
Val
>WENV183648232
OQVS01009336
248683
Bacillota
TTT
Lys
>WENV183648234
OQVS01009340
155273
Bacillota
CAT
Met
>WENV183648239
OQVS01009381
235095
Bacillota
GGT
Thr
>WENV183648259
OQVS01009791
338128
Bacillota
TTC
Glu
>WENV183648262
OQVS01009810
144594
Bacillota
CAC
Val
>WENV183648287
OQVS01010475
274189
Bacillota
TGT
Thr
>WENV183648296
OQVS01010835
235098
Bacillota
GAC
Val
>WENV183648306
OQVS01011186
37437
Bacillota
TAA
Leu
>WENV183648303
OQVS01011186
286137
Bacillota
GAA
Phe
>WENV183648308
OQVS01011186
84171
Bacillota
GAG
Leu
>WENV183648312
OQVS01011317
414486
Bacillota
CCC
Gly
>WENV183648321
OQVS01011906
11034
Bacillota
GGA
Ser
>WENV183648322
OQVS01011970
148188
Bacillota
CCG
Arg
>WENV183648335
OQVS01012629
58712
Bacillota
CAG
Leu
>WENV183648345
OQVS01012956
44854
Bacillota
TGA
Ser
>WENV183648346
OQVS01012956
4624
Bacillota
GCT
Ser
>WENV183648367
OQVS01013687
241471
Bacillota
TGC
Ala
>WENV183648368
OQVS01013690
44859
Bacillota
AAG
Leu
>WENV183648387
OQVS01013957
155958
Bacillota
GAT
Ile
>WENV183648404
OQVS01014504
163943
Bacillota
GTC
Asp
>WENV183648414
OQVS01014695
44854
Bacillota
TGA
Ser
>WENV183648415
OQVS01014695
4624
Bacillota
GCT
Ser
>WENV183648437
OQVS01015400
163943
Bacillota
GTC
Asp
>WENV183648444
OQVS01015636
338128
Bacillota
TTC
Glu
>WENV183648456
OQVS01016227
243098
Bacillota
GGT
Thr
>WENV183648458
OQVS01016266
144594
Bacillota
CAC
Val
>WENV183648462
OQVS01016387
148188
Bacillota
CCG
Arg
>WENV183648474
OQVS01016998
162445
Bacillota
CAT
Met
>WENV183648489
OQVS01017315
412387
Bacillota
GCA
Cys
>WENV183648493
OQVS01017513
80612
Bacillota
GTA
Tyr
>WENV183648502
OQVS01017954
235124
Bacillota
TGG
Pro
>WENV183648508
OQVS01018276
156189
Bacillota
GAT
Ile
>WENV183648513
OQVS01018403
44854
Bacillota
TGA
Ser
>WENV183648514
OQVS01018403
4624
Bacillota
GCT
Ser
>WENV183648517
OQVS01018517
247734
Bacillota
TGC
Ala
>WENV183648523
OQVS01018551
235079
Bacillota
GAA
Phe
>WENV183648525
OQVS01018831
44854
Bacillota
TGA
Ser
>WENV183648526
OQVS01018831
4624
Bacillota
GCT
Ser
>WENV183648537
OQVS01019058
173314
Bacillota
GAT
Ile
>WENV183648536
OQVS01019058
299139
Bacillota
TGC
Ala
>WENV183648560
OQVS01019862
144594
Bacillota
CAC
Val
>WENV183648561
OQVS01019865
263765
Bacillota
TAC
Val
>WENV183648567
OQVS01019979
411549
Bacillota
TTG
Gln
>WENV183648586
OQVS01020919
235124
Bacillota
TGG
Pro
>WENV183648594
OQVS01021258
196621
Bacillota
GTC
Asp
>WENV183648595
OQVS01021258
235095
Bacillota
GGT
Thr
>WENV183648619
OQVS01022419
144583
Bacillota
ACG
Arg
>WENV183648625
OQVS01022546
245298
Bacillota
CGG
Pro
>WENV183648626
OQVS01022560
411549
Bacillota
TTG
Gln
>WENV183648668
OQVS01025556
245296
Bacillota
CCC
Gly
>WENV183648726
OQVS01031449
249522
Bacillota
TAC
Val
>WENV183648735
OQVS01031852
338129
Bacillota
TGT
Thr
>WENV183648777
OQVS01036350
419639
Bacillota
GCA
Cys
>WENV183648868
OQVS01050171
274189
Bacillota
TGT
Thr
>WENV183648876
OQVS01051231
357939
Bacillota
GCA
Cys
>WENV183648878
OQVS01051368
157838
Bacillota
GTC
Asp
>WENV183648913
OQVS01056639
154711
Bacillota
TGG
Pro
>WENV183648969
OQVS01067658
245386
Bacillota
CCA
Trp
>WENV183648967
OQVS01067658
298639
Bacillota
GTT
Asn
>WENV183649034
OQVS01085649
144577
Bacillota
GAT
Ile
>WENV183649079
OQVS01098720
153911
Bacillota
GAT
Ile
>WENV183649106
OQVS01104937
198135
Bacillota
GAT
Ile
>WENV183649107
OQVS01105101
247057
Bacillota
TGC
Ala
>WENV183649116
OQVS01110091
16572
Bacillota
GCT
Ser
>WENV183649118
OQVS01110200
256380
Bacillota
>WENV183649127
OQVS01112855
347851
Bacillota
TTC
Glu
>WENV183649155
OQVS01123161
235171
Bacillota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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