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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170675112
LCWZ01007145
390153
Bacillota
GCC
Gly
>WENV170675218
LCWZ01017635
10842
Bacillota
GCT
Ser
>WENV170675259
LCWZ01021801
10842
Bacillota
GCT
Ser
>WENV170675417
LCWZ01067830
10842
Bacillota
GCT
Ser
>WENV170675075
LCWZ01003446
236179
Bacillota
TAC
Val
>WENV170675383
LCWZ01057228
236179
Bacillota
TAC
Val
>WENV170675395
LCWZ01058925
236179
Bacillota
TAC
Val
>WENV170675110
LCWZ01007145
253342
Bacillota
GTG
His
>WENV170675311
LCWZ01038713
154766
Bacillota
GTC
Asp
>WENV170675422
LCWZ01068528
154766
Bacillota
GTC
Asp
>WENV170675429
LCWZ01070465
154766
Bacillota
GTC
Asp
>WENV170675142
LCWZ01008378
274601
Bacillota
TAC
Val
>WENV170675269
LCWZ01023672
274601
Bacillota
TAC
Val
>WENV170675333
LCWZ01040933
274601
Bacillota
TAC
Val
>WENV170675344
LCWZ01043369
274601
Bacillota
TAC
Val
>WENV170675386
LCWZ01058163
274601
Bacillota
TAC
Val
>WENV170675491
LCWZ01093036
174771
Bacillota
GTG
His
>WENV170675217
LCWZ01017635
37083
Bacillota
TGA
Ser
>WENV170675527
LCWZ01110762
268272
Bacillota
TGC
Ala
>WENV170675346
LCWZ01044237
268272
Bacillota
TGC
Ala
>WENV170675304
LCWZ01037417
268272
Bacillota
TGC
Ala
>WENV170675300
LCWZ01035280
268566
Bacillota
TTG
Gln
>WENV170675246
LCWZ01020823
268566
Bacillota
TTG
Gln
>WENV170675111
LCWZ01007145
268566
Bacillota
TTG
Gln
>WENV170675001
LCWZ01000440
399666
Bacillota
GCC
Gly
>WENV170674989
LCWZ01000298
399666
Bacillota
GCC
Gly
>WENV170675104
LCWZ01006247
285635
Bacillota
TTT
Lys
>WENV170675150
LCWZ01009875
185518
Bacillota
TAC
Val
>WENV170675498
LCWZ01096023
348433
Bacillota
TTC
Glu
>WENV170675309
LCWZ01038713
348433
Bacillota
TTC
Glu
>WENV170675499
LCWZ01096023
312468
Bacillota
TAC
Val
>WENV170675310
LCWZ01038713
312468
Bacillota
TAC
Val
>WENV170675418
LCWZ01067830
161217
Bacillota
TGG
Pro
>WENV170675260
LCWZ01021801
161217
Bacillota
TGG
Pro
>WENV170675225
LCWZ01018657
161217
Bacillota
TGG
Pro
>WENV170675128
LCWZ01007443
161217
Bacillota
TGG
Pro
>WENV170675428
LCWZ01070465
258868
Bacillota
TAC
Val
>WENV170675340
LCWZ01042818
163943
Bacillota
GTC
Asp
>WENV170675208
LCWZ01015868
163943
Bacillota
GTC
Asp
>WENV170675173
LCWZ01011728
163943
Bacillota
GTC
Asp
>WENV170675151
LCWZ01009875
163943
Bacillota
GTC
Asp
>WENV170675120
LCWZ01007443
163943
Bacillota
GTC
Asp
>WENV170675071
LCWZ01003411
163943
Bacillota
GTC
Asp
>WENV170675338
LCWZ01042818
388132
Bacillota
TTC
Glu
>WENV170675206
LCWZ01015868
388132
Bacillota
TTC
Glu
>WENV170675171
LCWZ01011728
388132
Bacillota
TTC
Glu
>WENV170675149
LCWZ01009875
388132
Bacillota
TTC
Glu
>WENV170674973
LCWZ01000168
388132
Bacillota
TTC
Glu
>WENV170675230
LCWZ01018657
148140
Bacillota
GTC
Asp
>WENV170675500
LCWZ01096593
349442
Bacillota
GTT
Asn
>WENV170675432
LCWZ01071815
349442
Bacillota
GTT
Asn
>WENV170675203
LCWZ01015868
349442
Bacillota
GTT
Asn
>WENV170675148
LCWZ01009582
349442
Bacillota
GTT
Asn
>WENV170675483
LCWZ01090315
198135
Bacillota
GAT
Ile
>WENV170675461
LCWZ01082736
283750
Bacillota
TTC
Glu
>WENV170675433
LCWZ01071815
37421
Bacillota
TAA
Leu
>WENV170675297
LCWZ01035280
37421
Bacillota
TAA
Leu
>WENV170675204
LCWZ01015868
37421
Bacillota
TAA
Leu
>WENV170674984
LCWZ01000298
37421
Bacillota
TAA
Leu
>WENV170675342
LCWZ01043155
98810
Bacillota
GTA
Tyr
>WENV170675226
LCWZ01018657
157105
Bacillota
GAT
Ile
>WENV170675176
LCWZ01011728
157105
Bacillota
GAT
Ile
>WENV170675154
LCWZ01009875
157105
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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