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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
132 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170840402
MDSZ01203889
146662
Gammaproteobacteria
GAC
Val
>WENV170840765
MDSZ01210499
183605
Gammaproteobacteria
CCG
Arg
>WENV170837934
MDSZ01158330
95633
Gammaproteobacteria
GTA
Tyr
>WENV170840398
MDSZ01203823
95633
Gammaproteobacteria
GTA
Tyr
>WENV170841585
MDSZ01225073
20025
Gammaproteobacteria
GGA
Ser
>WENV170842350
MDSZ01238821
20025
Gammaproteobacteria
GGA
Ser
>WENV170842073
MDSZ01233510
235887
Gammaproteobacteria
GTG
His
>WENV170843747
MDSZ01265620
188516
Gammaproteobacteria
CAT
Met
>WENV170842812
MDSZ01247898
158396
Gammaproteobacteria
ACG
Arg
>WENV170842525
MDSZ01242190
158396
Gammaproteobacteria
ACG
Arg
>WENV170832868
MDSZ01070116
163492
Gammaproteobacteria
TGG
Pro
>WENV170829118
MDSZ01003211
58767
Gammaproteobacteria
CAG
Leu
>WENV170838135
MDSZ01162313
412094
Gammaproteobacteria
GCA
Cys
>WENV170842393
MDSZ01239447
279385
Gammaproteobacteria
TTT
Lys
>WENV170838000
MDSZ01159412
279385
Gammaproteobacteria
TTT
Lys
>WENV170843995
MDSZ01270236
147779
Gammaproteobacteria
CAT
Met
>WENV170831523
MDSZ01045797
145368
Gammaproteobacteria
CCT
Arg
>WENV170839662
MDSZ01189771
235516
Gammaproteobacteria
GTG
His
>WENV170842258
MDSZ01236982
238438
Gammaproteobacteria
>WENV170829299
MDSZ01006301
238438
Gammaproteobacteria
>WENV170829257
MDSZ01005496
238438
Gammaproteobacteria
>WENV170829255
MDSZ01005496
238438
Gammaproteobacteria
>WENV170829253
MDSZ01005496
238438
Gammaproteobacteria
>WENV170832038
MDSZ01055134
58822
Gammaproteobacteria
CAA
Leu
>WENV170830687
MDSZ01031161
17426
Gammaproteobacteria
GCT
Ser
>WENV170843271
MDSZ01257102
290337
Gammaproteobacteria
TAC
Val
>WENV170830090
MDSZ01020664
290337
Gammaproteobacteria
TAC
Val
>WENV170844010
MDSZ01270723
147053
Gammaproteobacteria
GTT
Asn
>WENV170836638
MDSZ01135075
147053
Gammaproteobacteria
GTT
Asn
>WENV170830451
MDSZ01027097
145260
Gammaproteobacteria
CAT
Met
>WENV170842449
MDSZ01240639
160030
Gammaproteobacteria
GGG
Pro
>WENV170842925
MDSZ01249969
171935
Gammaproteobacteria
ACG
Arg
>WENV170830801
MDSZ01033226
171935
Gammaproteobacteria
ACG
Arg
>WENV170837462
MDSZ01149701
147114
Gammaproteobacteria
CCT
Arg
>WENV170838625
MDSZ01171391
46594
Gammaproteobacteria
GGA
Ser
>WENV170831672
MDSZ01048226
46594
Gammaproteobacteria
GGA
Ser
>WENV170837769
MDSZ01155168
145367
Gammaproteobacteria
GGG
Pro
>WENV170840498
MDSZ01205701
145196
Gammaproteobacteria
CAT
Met
>WENV170838626
MDSZ01171421
185163
Gammaproteobacteria
ACG
Arg
>WENV170832595
MDSZ01065300
185163
Gammaproteobacteria
ACG
Arg
>WENV170843357
MDSZ01258741
59211
Gammaproteobacteria
TAA
Leu
>WENV170838121
MDSZ01162064
144979
Gammaproteobacteria
CGG
Pro
>WENV170836786
MDSZ01137384
417674
Gammaproteobacteria
GCA
Cys
>WENV170842504
MDSZ01241871
240642
Gammaproteobacteria
GTT
Asn
>WENV170831596
MDSZ01046974
240642
Gammaproteobacteria
GTT
Asn
>WENV170830250
MDSZ01023669
240642
Gammaproteobacteria
GTT
Asn
>WENV170829531
MDSZ01010563
240642
Gammaproteobacteria
GTT
Asn
>WENV170835203
MDSZ01109578
149036
Gammaproteobacteria
CCA
Trp
>WENV170832974
MDSZ01071640
149036
Gammaproteobacteria
CCA
Trp
>WENV170831382
MDSZ01043153
149036
Gammaproteobacteria
CCA
Trp
>WENV170832966
MDSZ01071568
44886
Gammaproteobacteria
TGA
Ser
>WENV170835122
MDSZ01108060
245602
Gammaproteobacteria
TTT
Lys
>WENV170832688
MDSZ01066690
245602
Gammaproteobacteria
TTT
Lys
>WENV170834530
MDSZ01098748
146791
Gammaproteobacteria
GAC
Val
>WENV170829330
MDSZ01006894
146791
Gammaproteobacteria
GAC
Val
>WENV170837590
MDSZ01151675
148148
Gammaproteobacteria
GAC
Val
>WENV170831954
MDSZ01053460
148148
Gammaproteobacteria
GAC
Val
>WENV170830365
MDSZ01025790
148148
Gammaproteobacteria
GAC
Val
>WENV170837849
MDSZ01156700
145261
Gammaproteobacteria
CAT
Met
>WENV170839314
MDSZ01183550
145366
Gammaproteobacteria
ACG
Arg
>WENV170833220
MDSZ01076033
145366
Gammaproteobacteria
ACG
Arg
>WENV170830445
MDSZ01027028
16284
Gammaproteobacteria
TGA
Ser
>WENV170839227
MDSZ01182110
17329
Gammaproteobacteria
TGA
Ser
>WENV170843457
MDSZ01260839
145369
Gammaproteobacteria
CGG
Pro
>WENV170829776
MDSZ01014678
69672
Gammaproteobacteria
TAA
Leu
>WENV170839106
MDSZ01179762
237425
Gammaproteobacteria
TTC
Glu
>WENV170835490
MDSZ01115019
237425
Gammaproteobacteria
TTC
Glu
>WENV170833805
MDSZ01086291
45345
Gammaproteobacteria
GGA
Ser
>WENV170842491
MDSZ01241593
185155
Gammaproteobacteria
CAT
Met
>WENV170831415
MDSZ01043841
98737
Gammaproteobacteria
GAG
Leu
>WENV170831702
MDSZ01048807
241230
Gammaproteobacteria
GAA
Phe
>WENV170835976
MDSZ01122890
95983
Gammaproteobacteria
>WENV170837596
MDSZ01151876
95635
Gammaproteobacteria
CAA
Leu
>WENV170836602
MDSZ01134454
252289
Gammaproteobacteria
TTT
Lys
>WENV170832235
MDSZ01058076
252289
Gammaproteobacteria
TTT
Lys
>WENV170832234
MDSZ01058076
252289
Gammaproteobacteria
TTT
Lys
>WENV170841798
MDSZ01228998
149038
Gammaproteobacteria
TGG
Pro
>WENV170842516
MDSZ01242112
279218
Gammaproteobacteria
TTC
Glu
>WENV170834195
MDSZ01093554
62501
Gammaproteobacteria
CAG
Leu
>WENV170834035
MDSZ01090752
62501
Gammaproteobacteria
CAG
Leu
>WENV170838262
MDSZ01164774
238510
Gammaproteobacteria
GCC
Gly
>WENV170830550
MDSZ01028858
238510
Gammaproteobacteria
GCC
Gly
>WENV170837935
MDSZ01158330
412476
Gammaproteobacteria
TCC
Gly
>WENV170835325
MDSZ01111644
173040
Gammaproteobacteria
GAC
Val
>WENV170829682
MDSZ01012992
173040
Gammaproteobacteria
GAC
Val
>WENV170839291
MDSZ01183095
338337
Gammaproteobacteria
CCT
Arg
>WENV170834175
MDSZ01093288
411842
Gammaproteobacteria
GCA
Cys
>WENV170834892
MDSZ01104471
249882
Gammaproteobacteria
GTT
Asn
>WENV170834891
MDSZ01104471
249882
Gammaproteobacteria
GTT
Asn
>WENV170835426
MDSZ01113810
412373
Gammaproteobacteria
GCA
Cys
>WENV170840080
MDSZ01197675
235886
Gammaproteobacteria
TTC
Glu
>WENV170832040
MDSZ01055134
235886
Gammaproteobacteria
TTC
Glu
>WENV170830253
MDSZ01023695
154796
Gammaproteobacteria
TCT
Arg
>WENV170841010
MDSZ01214743
238372
Gammaproteobacteria
CCT
Arg
>WENV170842071
MDSZ01233510
186449
Gammaproteobacteria
TGG
Pro
>WENV170836509
MDSZ01132731
186449
Gammaproteobacteria
TGG
Pro
>WENV170836097
MDSZ01124955
186449
Gammaproteobacteria
TGG
Pro
>WENV170834309
MDSZ01095074
186449
Gammaproteobacteria
TGG
Pro
>WENV170833237
MDSZ01076380
186449
Gammaproteobacteria
TGG
Pro
>WENV170829038
MDSZ01001919
186449
Gammaproteobacteria
TGG
Pro
>WENV170833995
MDSZ01089776
128930
Gammaproteobacteria
GTC
Asp
>WENV170838448
MDSZ01168048
65265
Gammaproteobacteria
CAG
Leu
>WENV170842662
MDSZ01245085
243485
Gammaproteobacteria
TGT
Thr
>WENV170837365
MDSZ01147906
243485
Gammaproteobacteria
TGT
Thr
>WENV170834229
MDSZ01093963
278259
Gammaproteobacteria
TTT
Lys
>WENV170834228
MDSZ01093963
278259
Gammaproteobacteria
TTT
Lys
>WENV170843922
MDSZ01269006
184454
Gammaproteobacteria
ACG
Arg
>WENV170842824
MDSZ01248007
184454
Gammaproteobacteria
ACG
Arg
>WENV170833900
MDSZ01087972
184454
Gammaproteobacteria
ACG
Arg
>WENV170834801
MDSZ01103054
59658
Gammaproteobacteria
CAA
Leu
>WENV170831008
MDSZ01037029
59658
Gammaproteobacteria
CAA
Leu
>WENV170834224
MDSZ01093963
149661
Gammaproteobacteria
CAT
Met
>WENV170842695
MDSZ01245908
237421
Gammaproteobacteria
TGT
Thr
>WENV170830191
MDSZ01022630
247088
Gammaproteobacteria
CCA
Trp
>WENV170833321
MDSZ01077956
23669
Gammaproteobacteria
GCT
Ser
>WENV170839195
MDSZ01181624
149037
Gammaproteobacteria
GAC
Val
>WENV170837281
MDSZ01146302
149037
Gammaproteobacteria
GAC
Val
>WENV170830922
MDSZ01035315
149037
Gammaproteobacteria
GAC
Val
>WENV170842292
MDSZ01237527
411735
Gammaproteobacteria
GCA
Cys
>WENV170837084
MDSZ01142956
411735
Gammaproteobacteria
GCA
Cys
>WENV170835471
MDSZ01114636
411735
Gammaproteobacteria
GCA
Cys
>WENV170831426
MDSZ01044078
45411
Gammaproteobacteria
GGA
Ser
>WENV170833014
MDSZ01072528
412463
Gammaproteobacteria
TCC
Gly
>WENV170839193
MDSZ01181608
163580
Gammaproteobacteria
GAC
Val
>WENV170836828
MDSZ01138300
23396
Gammaproteobacteria
GGA
Ser
>WENV170840693
MDSZ01209324
266766
Gammaproteobacteria
TGT
Thr
>WENV170839494
MDSZ01186436
266766
Gammaproteobacteria
TGT
Thr
>WENV170834174
MDSZ01093288
270352
Gammaproteobacteria
GCC
Gly
>WENV170837848
MDSZ01156690
173617
Gammaproteobacteria
GTC
Asp
>WENV170830353
MDSZ01025543
173617
Gammaproteobacteria
GTC
Asp
>WENV170840464
MDSZ01204848
150183
Gammaproteobacteria
CCG
Arg
>WENV170833831
MDSZ01086679
150183
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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