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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003144
NNBT01001888
129208
Cyanobacteriota
TAA
Leu
>WENV171003223
NNBT01002545
370416
Cyanobacteriota
TTT
Lys
>WENV171003110
NNBT01001201
235681
Cyanobacteriota
CCA
Trp
>WENV171003107
NNBT01001170
239593
Cyanobacteriota
GAA
Phe
>WENV171003095
NNBT01000745
242462
Cyanobacteriota
GGC
Ala
>WENV171003094
NNBT01000745
162050
Cyanobacteriota
CAT
Met
>WENV171003096
NNBT01000790
145539
Cyanobacteriota
GTC
Asp
>WENV171003406
NNBT01009888
50053
Cyanobacteriota
CGA
Ser
>WENV171003373
NNBT01007676
50053
Cyanobacteriota
CGA
Ser
>WENV171003114
NNBT01001392
50053
Cyanobacteriota
CGA
Ser
>WENV171003105
NNBT01001031
236095
Cyanobacteriota
TAC
Val
>WENV171003106
NNBT01001045
340601
Cyanobacteriota
TGT
Thr
>WENV171003387
NNBT01008331
254287
Cyanobacteriota
CTG
Gln
>WENV171003142
NNBT01001888
254287
Cyanobacteriota
CTG
Gln
>WENV171003192
NNBT01002290
3647
Cyanobacteriota
GCT
Ser
>WENV171003176
NNBT01002129
341020
Cyanobacteriota
GCC
Gly
>WENV171003085
NNBT01000305
350396
Cyanobacteriota
CCC
Gly
>WENV171003388
NNBT01008655
47131
Cyanobacteriota
TGA
Ser
>WENV171003099
NNBT01000920
47131
Cyanobacteriota
TGA
Ser
>WENV171003079
NNBT01000171
148814
Cyanobacteriota
GAC
Val
>WENV171003382
NNBT01008057
113807
Cyanobacteriota
GAG
Leu
>WENV171003072
NNBT01000038
350407
Cyanobacteriota
CTT
Lys
>WENV171003391
NNBT01009005
254286
Cyanobacteriota
CCG
Arg
>WENV171003098
NNBT01000873
254286
Cyanobacteriota
CCG
Arg
>WENV171003081
NNBT01000179
236096
Cyanobacteriota
CAT
Met
>WENV171003126
NNBT01001550
148812
Cyanobacteriota
CGG
Pro
>WENV171003083
NNBT01000278
148812
Cyanobacteriota
CGG
Pro
>WENV171003101
NNBT01000989
175353
Cyanobacteriota
CAT
Met
>WENV171003093
NNBT01000491
417134
Cyanobacteriota
TCC
Gly
>WENV171003381
NNBT01007853
239594
Cyanobacteriota
TCT
Arg
>WENV171003127
NNBT01001570
239591
Cyanobacteriota
GTG
His
>WENV171003075
NNBT01000086
340599
Cyanobacteriota
CGT
Thr
>WENV171003137
NNBT01001796
62462
Cyanobacteriota
CAA
Leu
>WENV171003120
NNBT01001485
353877
Cyanobacteriota
GTT
Asn
>WENV171003082
NNBT01000246
96866
Cyanobacteriota
TAG
Leu
>WENV171003148
NNBT01001888
254290
Cyanobacteriota
TGT
Thr
>WENV171003086
NNBT01000427
254290
Cyanobacteriota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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