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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
170 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180213704
OBAO01005449
196621
Bacillota
GTC
Asp
>WENV180214006
OBAO01022546
196621
Bacillota
GTC
Asp
>WENV180214120
OBAO01039412
155958
Bacillota
GAT
Ile
>WENV180213968
OBAO01018980
309417
Bacillota
GGC
Ala
>WENV180214138
OBAO01041651
309417
Bacillota
GGC
Ala
>WENV180213711
OBAO01005594
37213
Bacillota
TGA
Ser
>WENV180213235
OBAO01000682
144612
Bacillota
TCT
Arg
>WENV180213605
OBAO01003534
144612
Bacillota
TCT
Arg
>WENV180213734
OBAO01006047
154063
Bacillota
CGG
Pro
>WENV180213483
OBAO01002153
267649
Bacillota
TAC
Val
>WENV180212836
OBAO01000115
267649
Bacillota
TAC
Val
>WENV180212842
OBAO01000120
235134
Bacillota
GAA
Phe
>WENV180213352
OBAO01001096
339890
Bacillota
TTG
Gln
>WENV180214199
OBAO01059615
235098
Bacillota
GAC
Val
>WENV180214191
OBAO01058242
235098
Bacillota
GAC
Val
>WENV180214013
OBAO01023411
235098
Bacillota
GAC
Val
>WENV180213983
OBAO01020621
235098
Bacillota
GAC
Val
>WENV180214400
OBAO01185796
338152
Bacillota
TTC
Glu
>WENV180213977
OBAO01019995
44854
Bacillota
TGA
Ser
>WENV180213643
OBAO01004208
44854
Bacillota
TGA
Ser
>WENV180214299
OBAO01098516
235154
Bacillota
GTT
Asn
>WENV180214216
OBAO01069800
144577
Bacillota
GAT
Ile
>WENV180214128
OBAO01039842
144577
Bacillota
GAT
Ile
>WENV180212733
OBAO01000054
37071
Bacillota
TGA
Ser
>WENV180212724
OBAO01000053
37071
Bacillota
TGA
Ser
>WENV180214267
OBAO01085350
304022
Bacillota
GCC
Gly
>WENV180214178
OBAO01054343
304022
Bacillota
GCC
Gly
>WENV180214104
OBAO01036886
304022
Bacillota
GCC
Gly
>WENV180214048
OBAO01028826
304022
Bacillota
GCC
Gly
>WENV180213495
OBAO01002300
304022
Bacillota
GCC
Gly
>WENV180213333
OBAO01001036
59312
Bacillota
CAG
Leu
>WENV180213062
OBAO01000348
59312
Bacillota
CAG
Leu
>WENV180213682
OBAO01004970
238910
Bacillota
CTT
Lys
>WENV180214213
OBAO01067668
338147
Bacillota
CTC
Glu
>WENV180213531
OBAO01002499
338147
Bacillota
CTC
Glu
>WENV180213210
OBAO01000631
338147
Bacillota
CTC
Glu
>WENV180213209
OBAO01000631
338147
Bacillota
CTC
Glu
>WENV180213086
OBAO01000392
338147
Bacillota
CTC
Glu
>WENV180212906
OBAO01000176
338147
Bacillota
CTC
Glu
>WENV180212645
OBAO01000032
338147
Bacillota
CTC
Glu
>WENV180214320
OBAO01109494
235150
Bacillota
TGC
Ala
>WENV180214071
OBAO01031693
235150
Bacillota
TGC
Ala
>WENV180214136
OBAO01041530
235137
Bacillota
TGC
Ala
>WENV180214281
OBAO01089852
235294
Bacillota
TGC
Ala
>WENV180214241
OBAO01076183
338208
Bacillota
>WENV180214208
OBAO01065208
340802
Bacillota
TTG
Gln
>WENV180213949
OBAO01017099
340802
Bacillota
TTG
Gln
>WENV180212771
OBAO01000073
293599
Bacillota
CTT
Lys
>WENV180213436
OBAO01001636
235114
Bacillota
TTT
Lys
>WENV180212888
OBAO01000162
235114
Bacillota
TTT
Lys
>WENV180214328
OBAO01114240
388249
Bacillota
GCA
Cys
>WENV180214399
OBAO01185666
429429
Bacillota
CCA
Trp
>WENV180213793
OBAO01007699
429429
Bacillota
CCA
Trp
>WENV180213287
OBAO01000854
429429
Bacillota
CCA
Trp
>WENV180212781
OBAO01000082
429429
Bacillota
CCA
Trp
>WENV180214184
OBAO01054792
313454
Bacillota
GAA
Phe
>WENV180213325
OBAO01001014
313454
Bacillota
GAA
Phe
>WENV180213574
OBAO01003054
41154
Bacillota
TAA
Leu
>WENV180213061
OBAO01000348
44859
Bacillota
AAG
Leu
>WENV180213060
OBAO01000348
44859
Bacillota
AAG
Leu
>WENV180214223
OBAO01072511
11034
Bacillota
GGA
Ser
>WENV180213955
OBAO01017272
11034
Bacillota
GGA
Ser
>WENV180213391
OBAO01001341
11034
Bacillota
GGA
Ser
>WENV180214371
OBAO01182049
235117
Bacillota
TAC
Val
>WENV180213366
OBAO01001181
274189
Bacillota
TGT
Thr
>WENV180214266
OBAO01085350
235079
Bacillota
GAA
Phe
>WENV180214204
OBAO01063724
235079
Bacillota
GAA
Phe
>WENV180214169
OBAO01049247
235079
Bacillota
GAA
Phe
>WENV180214047
OBAO01028826
235079
Bacillota
GAA
Phe
>WENV180213628
OBAO01003895
235079
Bacillota
GAA
Phe
>WENV180213558
OBAO01002838
235079
Bacillota
GAA
Phe
>WENV180212701
OBAO01000044
235079
Bacillota
GAA
Phe
>WENV180214127
OBAO01039842
235087
Bacillota
TGC
Ala
>WENV180213891
OBAO01012725
338149
Bacillota
CTC
Glu
>WENV180213728
OBAO01006000
338149
Bacillota
CTC
Glu
>WENV180213316
OBAO01000986
338149
Bacillota
CTC
Glu
>WENV180212532
OBAO01000002
271471
Bacillota
GCC
Gly
>WENV180214252
OBAO01078724
144766
Bacillota
CAT
Met
>WENV180214159
OBAO01047398
245298
Bacillota
CGG
Pro
>WENV180213889
OBAO01012622
37269
Bacillota
TGA
Ser
>WENV180212964
OBAO01000224
37269
Bacillota
TGA
Ser
>WENV180214183
OBAO01054792
169968
Bacillota
CAT
Met
>WENV180213318
OBAO01000987
162445
Bacillota
CAT
Met
>WENV180214190
OBAO01057977
201704
Bacillota
GAT
Ile
>WENV180213662
OBAO01004741
152492
Bacillota
GGG
Pro
>WENV180213090
OBAO01000400
152492
Bacillota
GGG
Pro
>WENV180214348
OBAO01132986
144599
Bacillota
GTC
Asp
>WENV180212699
OBAO01000044
235078
Bacillota
TAC
Val
>WENV180214115
OBAO01038423
153911
Bacillota
GAT
Ile
>WENV180213044
OBAO01000323
100326
Bacillota
GTA
Tyr
>WENV180212920
OBAO01000187
100326
Bacillota
GTA
Tyr
>WENV180214363
OBAO01162337
144610
Bacillota
GTG
His
>WENV180214207
OBAO01065208
144610
Bacillota
GTG
His
>WENV180213948
OBAO01017099
144610
Bacillota
GTG
His
>WENV180213758
OBAO01006626
144610
Bacillota
GTG
His
>WENV180213522
OBAO01002422
144610
Bacillota
GTG
His
>WENV180212843
OBAO01000120
240017
Bacillota
GCC
Gly
>WENV180212639
OBAO01000025
240017
Bacillota
GCC
Gly
>WENV180214158
OBAO01047398
411547
Bacillota
CTG
Gln
>WENV180213982
OBAO01020545
411547
Bacillota
CTG
Gln
>WENV180213979
OBAO01020335
411547
Bacillota
CTG
Gln
>WENV180213978
OBAO01019995
4624
Bacillota
GCT
Ser
>WENV180213644
OBAO01004208
4624
Bacillota
GCT
Ser
>WENV180213257
OBAO01000757
263765
Bacillota
TAC
Val
>WENV180212840
OBAO01000120
263765
Bacillota
TAC
Val
>WENV180212638
OBAO01000025
263765
Bacillota
TAC
Val
>WENV180212529
OBAO01000002
263765
Bacillota
TAC
Val
>WENV180214099
OBAO01036312
412387
Bacillota
GCA
Cys
>WENV180213263
OBAO01000771
412387
Bacillota
GCA
Cys
>WENV180214007
OBAO01022546
235095
Bacillota
GGT
Thr
>WENV180213705
OBAO01005449
235095
Bacillota
GGT
Thr
>WENV180213578
OBAO01003097
235095
Bacillota
GGT
Thr
>WENV180213371
OBAO01001195
419639
Bacillota
GCA
Cys
>WENV180214003
OBAO01022467
411549
Bacillota
TTG
Gln
>WENV180213458
OBAO01001837
411549
Bacillota
TTG
Gln
>WENV180213402
OBAO01001405
411549
Bacillota
TTG
Gln
>WENV180212900
OBAO01000172
235142
Bacillota
CTT
Lys
>WENV180212726
OBAO01000054
235142
Bacillota
CTT
Lys
>WENV180213685
OBAO01004970
245386
Bacillota
CCA
Trp
>WENV180213987
OBAO01020819
148188
Bacillota
CCG
Arg
>WENV180213800
OBAO01007944
148188
Bacillota
CCG
Arg
>WENV180213240
OBAO01000698
148188
Bacillota
CCG
Arg
>WENV180213303
OBAO01000938
256380
Bacillota
>WENV180213368
OBAO01001194
235127
Bacillota
TTT
Lys
>WENV180214122
OBAO01039419
235905
Bacillota
GTG
His
>WENV180213846
OBAO01009844
163943
Bacillota
GTC
Asp
>WENV180212554
OBAO01000005
298620
Bacillota
CAT
Met
>WENV180213996
OBAO01021420
411739
Bacillota
TCC
Gly
>WENV180214327
OBAO01114240
235638
Bacillota
GAA
Phe
>WENV180213744
OBAO01006402
235124
Bacillota
TGG
Pro
>WENV180213660
OBAO01004710
235124
Bacillota
TGG
Pro
>WENV180214124
OBAO01039419
237963
Bacillota
TTT
Lys
>WENV180214121
OBAO01039419
201667
Bacillota
TCT
Arg
>WENV180213563
OBAO01002892
338129
Bacillota
TGT
Thr
>WENV180214382
OBAO01182549
144583
Bacillota
ACG
Arg
>WENV180213514
OBAO01002389
144652
Bacillota
GTC
Asp
>WENV180213192
OBAO01000584
247734
Bacillota
TGC
Ala
>WENV180213805
OBAO01008136
235171
Bacillota
CCA
Trp
>WENV180214365
OBAO01172904
238974
Bacillota
GAA
Phe
>WENV180213892
OBAO01012725
144621
Bacillota
GTT
Asn
>WENV180213556
OBAO01002837
144621
Bacillota
GTT
Asn
>WENV180213496
OBAO01002303
144621
Bacillota
GTT
Asn
>WENV180213317
OBAO01000986
144621
Bacillota
GTT
Asn
>WENV180213435
OBAO01001636
235113
Bacillota
GAA
Phe
>WENV180212721
OBAO01000053
235113
Bacillota
GAA
Phe
>WENV180212953
OBAO01000205
277200
Bacillota
GGC
Ala
>WENV180213103
OBAO01000403
243098
Bacillota
GGT
Thr
>WENV180213536
OBAO01002554
58712
Bacillota
CAG
Leu
>WENV180213686
OBAO01004972
21693
Bacillota
GCT
Ser
>WENV180214242
OBAO01076183
144762
Bacillota
TCT
Arg
>WENV180213681
OBAO01004965
245296
Bacillota
CCC
Gly
>WENV180213729
OBAO01006000
272992
Bacillota
CTT
Lys
>WENV180213414
OBAO01001506
344240
Bacillota
GCC
Gly
>WENV180213370
OBAO01001195
344240
Bacillota
GCC
Gly
>WENV180213245
OBAO01000719
344240
Bacillota
GCC
Gly
>WENV180214197
OBAO01059207
198135
Bacillota
GAT
Ile
>WENV180213078
OBAO01000371
196632
Bacillota
GTC
Asp
>WENV180214301
OBAO01098805
157635
Bacillota
TCT
Arg
>WENV180214196
OBAO01059207
299139
Bacillota
TGC
Ala
>WENV180213824
OBAO01008811
144594
Bacillota
CAC
Val
>WENV180213251
OBAO01000729
144594
Bacillota
CAC
Val
>WENV180213433
OBAO01001636
95563
Bacillota
GTA
Tyr
>WENV180213111
OBAO01000420
95563
Bacillota
GTA
Tyr
>WENV180212567
OBAO01000008
338127
Bacillota
TTG
Gln
>WENV180213454
OBAO01001770
414486
Bacillota
CCC
Gly
>WENV180213632
OBAO01004099
272488
Bacillota
GAA
Phe
>WENV180213910
OBAO01014052
114075
Bacillota
TAG
Leu
>WENV180213654
OBAO01004534
338128
Bacillota
TTC
Glu
>WENV180213369
OBAO01001195
245344
Bacillota
GAA
Phe
>WENV180213298
OBAO01000917
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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