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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180461215
OBXZ01027815
243647
Bacillota
TTT
Lys
>WENV180461298
OBXZ01058912
361659
Bacillota
GCC
Gly
>WENV180460280
OBXZ01000150
144612
Bacillota
TCT
Arg
>WENV180460897
OBXZ01002407
144612
Bacillota
TCT
Arg
>WENV180461120
OBXZ01010362
154063
Bacillota
CGG
Pro
>WENV180460165
OBXZ01000073
267649
Bacillota
TAC
Val
>WENV180460489
OBXZ01000401
267649
Bacillota
TAC
Val
>WENV180461232
OBXZ01034306
267649
Bacillota
TAC
Val
>WENV180461100
OBXZ01008625
235287
Bacillota
TTT
Lys
>WENV180460973
OBXZ01003124
235098
Bacillota
GAC
Val
>WENV180460698
OBXZ01000875
235098
Bacillota
GAC
Val
>WENV180460780
OBXZ01001178
338152
Bacillota
TTC
Glu
>WENV180460368
OBXZ01000235
44854
Bacillota
TGA
Ser
>WENV180461095
OBXZ01008625
356488
Bacillota
TGT
Thr
>WENV180461351
OBXZ01085406
235154
Bacillota
GTT
Asn
>WENV180461289
OBXZ01055202
235154
Bacillota
GTT
Asn
>WENV180461179
OBXZ01018424
246023
Bacillota
TGC
Ala
>WENV180461141
OBXZ01013175
235150
Bacillota
TGC
Ala
>WENV180460448
OBXZ01000336
155273
Bacillota
CAT
Met
>WENV180461239
OBXZ01034748
114359
Bacillota
TAG
Leu
>WENV180461191
OBXZ01022370
235137
Bacillota
TGC
Ala
>WENV180461145
OBXZ01013971
235137
Bacillota
TGC
Ala
>WENV180461272
OBXZ01048627
235294
Bacillota
TGC
Ala
>WENV180460927
OBXZ01002582
340802
Bacillota
TTG
Gln
>WENV180461170
OBXZ01017632
341763
Bacillota
CTC
Glu
>WENV180460662
OBXZ01000754
182792
Bacillota
GTC
Asp
>WENV180460437
OBXZ01000333
182792
Bacillota
GTC
Asp
>WENV180461018
OBXZ01004418
16834
Bacillota
GCT
Ser
>WENV180461168
OBXZ01017631
268272
Bacillota
TGC
Ala
>WENV180460611
OBXZ01000608
11034
Bacillota
GGA
Ser
>WENV180461335
OBXZ01084321
235117
Bacillota
TAC
Val
>WENV180461099
OBXZ01008625
235290
Bacillota
TTG
Gln
>WENV180461331
OBXZ01083944
114002
Bacillota
CAA
Leu
>WENV180461340
OBXZ01084496
338550
Bacillota
>WENV180460967
OBXZ01002996
235079
Bacillota
GAA
Phe
>WENV180460663
OBXZ01000754
235079
Bacillota
GAA
Phe
>WENV180461275
OBXZ01050345
243612
Bacillota
TAC
Val
>WENV180461222
OBXZ01030782
149041
Bacillota
GTC
Asp
>WENV180461102
OBXZ01008631
338149
Bacillota
CTC
Glu
>WENV180460665
OBXZ01000755
338149
Bacillota
CTC
Glu
>WENV180461341
OBXZ01084522
144766
Bacillota
CAT
Met
>WENV180460645
OBXZ01000714
245298
Bacillota
CGG
Pro
>WENV180460800
OBXZ01001251
37269
Bacillota
TGA
Ser
>WENV180460774
OBXZ01001160
169968
Bacillota
CAT
Met
>WENV180460551
OBXZ01000483
162445
Bacillota
CAT
Met
>WENV180460549
OBXZ01000483
162445
Bacillota
CAT
Met
>WENV180460068
OBXZ01000011
152492
Bacillota
GGG
Pro
>WENV180461334
OBXZ01084316
411585
Bacillota
GCA
Cys
>WENV180461343
OBXZ01084587
144599
Bacillota
GTC
Asp
>WENV180460926
OBXZ01002582
144610
Bacillota
GTG
His
>WENV180461009
OBXZ01003852
240017
Bacillota
GCC
Gly
>WENV180460041
OBXZ01000001
240017
Bacillota
GCC
Gly
>WENV180460644
OBXZ01000714
411547
Bacillota
CTG
Gln
>WENV180460354
OBXZ01000217
411547
Bacillota
CTG
Gln
>WENV180460369
OBXZ01000235
4624
Bacillota
GCT
Ser
>WENV180461007
OBXZ01003852
263765
Bacillota
TAC
Val
>WENV180461316
OBXZ01068465
10680
Bacillota
GGA
Ser
>WENV180461091
OBXZ01008625
411584
Bacillota
TCC
Gly
>WENV180461124
OBXZ01010754
18852
Bacillota
GCT
Ser
>WENV180461078
OBXZ01007717
18852
Bacillota
GCT
Ser
>WENV180460439
OBXZ01000333
235095
Bacillota
GGT
Thr
>WENV180460438
OBXZ01000333
235095
Bacillota
GGT
Thr
>WENV180460566
OBXZ01000518
344183
Bacillota
CTG
Gln
>WENV180460966
OBXZ01002993
185292
Bacillota
ACG
Arg
>WENV180461094
OBXZ01008625
235289
Bacillota
GTT
Asn
>WENV180460643
OBXZ01000714
411549
Bacillota
TTG
Gln
>WENV180460178
OBXZ01000079
245386
Bacillota
CCA
Trp
>WENV180461075
OBXZ01007474
59296
Bacillota
AAG
Leu
>WENV180460652
OBXZ01000736
148188
Bacillota
CCG
Arg
>WENV180460842
OBXZ01001623
80612
Bacillota
GTA
Tyr
>WENV180460418
OBXZ01000299
80612
Bacillota
GTA
Tyr
>WENV180461032
OBXZ01004882
235127
Bacillota
TTT
Lys
>WENV180461276
OBXZ01050345
368876
Bacillota
GCC
Gly
>WENV180461030
OBXZ01004882
147674
Bacillota
TCT
Arg
>WENV180461097
OBXZ01008625
113612
Bacillota
TAG
Leu
>WENV180461299
OBXZ01058912
411739
Bacillota
TCC
Gly
>WENV180460736
OBXZ01001024
235124
Bacillota
TGG
Pro
>WENV180461208
OBXZ01027683
163753
Bacillota
TGG
Pro
>WENV180461238
OBXZ01034748
237963
Bacillota
TTT
Lys
>WENV180460290
OBXZ01000156
338129
Bacillota
TGT
Thr
>WENV180461236
OBXZ01034748
279635
Bacillota
GTG
His
>WENV180461213
OBXZ01027815
243613
Bacillota
GTG
His
>WENV180461190
OBXZ01022369
144583
Bacillota
ACG
Arg
>WENV180460504
OBXZ01000410
247734
Bacillota
TGC
Ala
>WENV180460436
OBXZ01000333
235171
Bacillota
CCA
Trp
>WENV180461301
OBXZ01060858
238974
Bacillota
GAA
Phe
>WENV180460637
OBXZ01000685
238974
Bacillota
GAA
Phe
>WENV180461013
OBXZ01004096
144621
Bacillota
GTT
Asn
>WENV180460666
OBXZ01000755
144621
Bacillota
GTT
Asn
>WENV180460703
OBXZ01000903
58712
Bacillota
CAG
Leu
>WENV180460561
OBXZ01000516
58712
Bacillota
CAG
Leu
>WENV180461098
OBXZ01008625
144762
Bacillota
TCT
Arg
>WENV180460802
OBXZ01001256
245296
Bacillota
CCC
Gly
>WENV180461103
OBXZ01008631
272992
Bacillota
CTT
Lys
>WENV180460975
OBXZ01003170
272992
Bacillota
CTT
Lys
>WENV180460925
OBXZ01002582
157635
Bacillota
TCT
Arg
>WENV180460470
OBXZ01000372
144594
Bacillota
CAC
Val
>WENV180461054
OBXZ01006019
414486
Bacillota
CCC
Gly
>WENV180460775
OBXZ01001160
272488
Bacillota
GAA
Phe
>WENV180460271
OBXZ01000140
272488
Bacillota
GAA
Phe
>WENV180461303
OBXZ01060858
238945
Bacillota
GCC
Gly
>WENV180460938
OBXZ01002713
238945
Bacillota
GCC
Gly
>WENV180460936
OBXZ01002713
238945
Bacillota
GCC
Gly
>WENV180460741
OBXZ01001041
238945
Bacillota
GCC
Gly
>WENV180460272
OBXZ01000140
238945
Bacillota
GCC
Gly
>WENV180460968
OBXZ01002996
249259
Bacillota
GCC
Gly
>WENV180460840
OBXZ01001623
249259
Bacillota
GCC
Gly
>WENV180460664
OBXZ01000754
249259
Bacillota
GCC
Gly
>WENV180460765
OBXZ01001126
273862
Bacillota
TGC
Ala
>WENV180461214
OBXZ01027815
343027
Bacillota
TTG
Gln
>WENV180461254
OBXZ01042620
338207
Bacillota
TTC
Glu
>WENV180460850
OBXZ01001811
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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