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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180726600
ODGU01000166
267632
Actinomycetota
GTT
Asn
>WENV180726563
ODGU01000114
235615
Actinomycetota
TGC
Ala
>WENV180728169
ODGU01028714
235615
Actinomycetota
TGC
Ala
>WENV180729108
ODGU01200072
38355
Actinomycetota
GAG
Leu
>WENV180727945
ODGU01017740
413566
Actinomycetota
CCC
Gly
>WENV180726867
ODGU01000840
37831
Actinomycetota
GGA
Ser
>WENV180727623
ODGU01008602
345178
Actinomycetota
CTG
Gln
>WENV180726512
ODGU01000057
235606
Actinomycetota
GGT
Thr
>WENV180728583
ODGU01066760
246840
Actinomycetota
CAC
Val
>WENV180727992
ODGU01019201
246840
Actinomycetota
CAC
Val
>WENV180729262
ODGU01305632
361079
Actinomycetota
CTG
Gln
>WENV180728364
ODGU01043484
361079
Actinomycetota
CTG
Gln
>WENV180728159
ODGU01028323
340959
Actinomycetota
GTT
Asn
>WENV180728107
ODGU01024675
340959
Actinomycetota
GTT
Asn
>WENV180727285
ODGU01003896
259184
Actinomycetota
GTG
His
>WENV180727257
ODGU01003523
158373
Actinomycetota
GGG
Pro
>WENV180727642
ODGU01008857
158373
Actinomycetota
GGG
Pro
>WENV180728127
ODGU01025925
149272
Actinomycetota
TTT
Lys
>WENV180727700
ODGU01010123
149272
Actinomycetota
TTT
Lys
>WENV180728944
ODGU01128786
418439
Actinomycetota
TCC
Gly
>WENV180729223
ODGU01265935
235734
Actinomycetota
>WENV180726601
ODGU01000166
145272
Actinomycetota
CAT
Met
>WENV180728493
ODGU01053909
96367
Actinomycetota
GTA
Tyr
>WENV180726467
ODGU01000035
341846
Actinomycetota
TCC
Gly
>WENV180728349
ODGU01041058
84037
Actinomycetota
CAG
Leu
>WENV180726849
ODGU01000740
235610
Actinomycetota
TGT
Thr
>WENV180727422
ODGU01005135
412871
Actinomycetota
GCA
Cys
>WENV180728555
ODGU01062059
338389
Actinomycetota
CAC
Val
>WENV180727805
ODGU01012719
338389
Actinomycetota
CAC
Val
>WENV180726608
ODGU01000176
235663
Actinomycetota
TTT
Lys
>WENV180727845
ODGU01013681
240122
Actinomycetota
TGT
Thr
>WENV180726562
ODGU01000114
145052
Actinomycetota
GAT
Ile
>WENV180728797
ODGU01097634
241627
Actinomycetota
>WENV180726712
ODGU01000305
241627
Actinomycetota
>WENV180726513
ODGU01000057
338474
Actinomycetota
CAT
Met
>WENV180728029
ODGU01020555
254819
Actinomycetota
CTC
Glu
>WENV180729225
ODGU01265935
339641
Actinomycetota
GAC
Val
>WENV180728829
ODGU01103158
154640
Actinomycetota
CTT
Lys
>WENV180729224
ODGU01265935
411803
Actinomycetota
GCA
Cys
>WENV180728585
ODGU01067154
16591
Actinomycetota
GAG
Leu
>WENV180727941
ODGU01017409
415620
Actinomycetota
TCC
Gly
>WENV180728495
ODGU01053909
149271
Actinomycetota
CAT
Met
>WENV180728090
ODGU01023962
246015
Actinomycetota
GTG
His
>WENV180729209
ODGU01257956
239204
Actinomycetota
CTT
Lys
>WENV180728182
ODGU01029213
155366
Actinomycetota
GAA
Phe
>WENV180727286
ODGU01003923
96366
Actinomycetota
TAG
Leu
>WENV180728618
ODGU01070465
235662
Actinomycetota
TGT
Thr
>WENV180727862
ODGU01014098
246807
Actinomycetota
TGC
Ala
>WENV180728578
ODGU01066212
246791
Actinomycetota
TCT
Arg
>WENV180727308
ODGU01004112
246791
Actinomycetota
TCT
Arg
>WENV180726596
ODGU01000153
266917
Actinomycetota
GTG
His
>WENV180726617
ODGU01000182
37093
Actinomycetota
GAG
Leu
>WENV180728635
ODGU01072734
23975
Actinomycetota
GCT
Ser
>WENV180726514
ODGU01000057
250703
Actinomycetota
CCA
Trp
>WENV180728180
ODGU01029213
277211
Actinomycetota
TTC
Glu
>WENV180728772
ODGU01093057
121559
Actinomycetota
>WENV180728633
ODGU01072379
121559
Actinomycetota
>WENV180728174
ODGU01028895
246299
Actinomycetota
CTT
Lys
>WENV180728008
ODGU01019660
411740
Actinomycetota
CCC
Gly
>WENV180726814
ODGU01000610
411740
Actinomycetota
CCC
Gly
>WENV180727971
ODGU01018510
235388
Actinomycetota
GTG
His
>WENV180727082
ODGU01001975
148463
Actinomycetota
TAA
Leu
>WENV180728796
ODGU01097634
363051
Actinomycetota
CTG
Gln
>WENV180729170
ODGU01235009
246222
Actinomycetota
CCG
Arg
>WENV180728020
ODGU01020002
246222
Actinomycetota
CCG
Arg
>WENV180727803
ODGU01012719
411682
Actinomycetota
GCA
Cys
>WENV180726574
ODGU01000126
260823
Actinomycetota
TGC
Ala
>WENV180728309
ODGU01037945
37359
Actinomycetota
>WENV180728839
ODGU01105165
151943
Actinomycetota
>WENV180728501
ODGU01054637
45767
Actinomycetota
GGA
Ser
>WENV180727873
ODGU01014528
152190
Actinomycetota
GAT
Ile
>WENV180726573
ODGU01000126
152190
Actinomycetota
GAT
Ile
>WENV180727088
ODGU01002031
60896
Actinomycetota
CAG
Leu
>WENV180728451
ODGU01050420
280137
Actinomycetota
CTT
Lys
>WENV180728359
ODGU01042356
240123
Actinomycetota
TAC
Val
>WENV180727420
ODGU01005135
345171
Actinomycetota
CAC
Val
>WENV180728764
ODGU01090224
97617
Actinomycetota
GTA
Tyr
>WENV180729003
ODGU01149679
48036
Actinomycetota
CGA
Ser
>WENV180728311
ODGU01038118
363559
Actinomycetota
CAC
Val
>WENV180728365
ODGU01043484
240121
Actinomycetota
CTC
Glu
>WENV180728676
ODGU01076361
248046
Actinomycetota
CCA
Trp
>WENV180728459
ODGU01051391
149269
Actinomycetota
TGG
Pro
>WENV180726753
ODGU01000424
11157
Actinomycetota
GCT
Ser
>WENV180726564
ODGU01000114
58781
Actinomycetota
CAG
Leu
>WENV180728400
ODGU01046493
340958
Actinomycetota
TTG
Gln
>WENV180726612
ODGU01000176
235613
Actinomycetota
GAA
Phe
>WENV180726696
ODGU01000282
145085
Actinomycetota
CAA
Leu
>WENV180728486
ODGU01052694
246806
Actinomycetota
TGT
Thr
>WENV180727309
ODGU01004112
239183
Actinomycetota
GTG
His
>WENV180729168
ODGU01234847
59716
Actinomycetota
CAG
Leu
>WENV180728526
ODGU01057742
153915
Actinomycetota
ACG
Arg
>WENV180726597
ODGU01000153
241612
Actinomycetota
CTT
Lys
>WENV180728243
ODGU01033154
340329
Actinomycetota
CAT
Met
>WENV180728689
ODGU01081518
345177
Actinomycetota
CAC
Val
>WENV180726805
ODGU01000591
280065
Actinomycetota
CGT
Thr
>WENV180726545
ODGU01000089
235603
Actinomycetota
CCG
Arg
>WENV180727865
ODGU01014248
37358
Actinomycetota
TGA
Ser
>WENV180728898
ODGU01118315
24777
Actinomycetota
GCT
Ser
>WENV180728130
ODGU01026249
240124
Actinomycetota
CGT
Thr
>WENV180728872
ODGU01114179
3306
Actinomycetota
TAT
Ile
>WENV180728310
ODGU01038118
235575
Actinomycetota
CTC
Glu
>WENV180726560
ODGU01000111
417269
Actinomycetota
CCC
Gly
>WENV180729247
ODGU01288388
96368
Actinomycetota
TAA
Leu
>WENV180728586
ODGU01067221
236216
Actinomycetota
GGC
Ala
>WENV180728354
ODGU01041888
235768
Actinomycetota
CGT
Thr
>WENV180726760
ODGU01000451
155332
Actinomycetota
TAA
Leu
>WENV180727630
ODGU01008699
345176
Actinomycetota
CCG
Arg
>WENV180728028
ODGU01020555
345416
Actinomycetota
CTG
Gln
>WENV180727452
ODGU01005752
345416
Actinomycetota
CTG
Gln
>WENV180727562
ODGU01007782
37773
Actinomycetota
CGA
Ser
>WENV180726602
ODGU01000166
235614
Actinomycetota
TAC
Val
>WENV180726609
ODGU01000176
235612
Actinomycetota
TTC
Glu
>WENV180728883
ODGU01115609
246800
Actinomycetota
CAT
Met
>WENV180728547
ODGU01061391
412870
Actinomycetota
TCC
Gly
>WENV180726868
ODGU01000840
16836
Actinomycetota
CGA
Ser
>WENV180728584
ODGU01066769
261571
Actinomycetota
GTT
Asn
>WENV180727946
ODGU01017752
261571
Actinomycetota
GTT
Asn
>WENV180726711
ODGU01000305
338388
Actinomycetota
CTG
Gln
>WENV180728361
ODGU01042803
155350
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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