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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
211 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180771852
ODIH01011884
196621
Bacillota
GTC
Asp
>WENV180771946
ODIH01016407
196621
Bacillota
GTC
Asp
>WENV180771965
ODIH01017423
196621
Bacillota
GTC
Asp
>WENV180772580
ODIH01129171
196621
Bacillota
GTC
Asp
>WENV180772605
ODIH01141793
155958
Bacillota
GAT
Ile
>WENV180772621
ODIH01149870
155958
Bacillota
GAT
Ile
>WENV180772032
ODIH01021348
309417
Bacillota
GGC
Ala
>WENV180772588
ODIH01134578
158247
Bacillota
>WENV180770104
ODIH01000009
37213
Bacillota
TGA
Ser
>WENV180771381
ODIH01003242
144612
Bacillota
TCT
Arg
>WENV180771631
ODIH01006296
144612
Bacillota
TCT
Arg
>WENV180771718
ODIH01008271
144612
Bacillota
TCT
Arg
>WENV180772158
ODIH01031788
144612
Bacillota
TCT
Arg
>WENV180772554
ODIH01120451
267649
Bacillota
TAC
Val
>WENV180771144
ODIH01001881
267649
Bacillota
TAC
Val
>WENV180770527
ODIH01000291
339890
Bacillota
TTG
Gln
>WENV180770214
ODIH01000044
339890
Bacillota
TTG
Gln
>WENV180772254
ODIH01047562
235098
Bacillota
GAC
Val
>WENV180771832
ODIH01011239
235098
Bacillota
GAC
Val
>WENV180771456
ODIH01003944
235098
Bacillota
GAC
Val
>WENV180772160
ODIH01031895
338152
Bacillota
TTC
Glu
>WENV180771293
ODIH01002582
338152
Bacillota
TTC
Glu
>WENV180770536
ODIH01000296
148239
Bacillota
TCT
Arg
>WENV180772842
ODIH01304339
44854
Bacillota
TGA
Ser
>WENV180772386
ODIH01069427
235154
Bacillota
GTT
Asn
>WENV180772175
ODIH01032828
144577
Bacillota
GAT
Ile
>WENV180771186
ODIH01002100
37071
Bacillota
TGA
Ser
>WENV180772938
ODIH01355886
304022
Bacillota
GCC
Gly
>WENV180772206
ODIH01038411
304022
Bacillota
GCC
Gly
>WENV180772118
ODIH01027893
304022
Bacillota
GCC
Gly
>WENV180771966
ODIH01017423
304022
Bacillota
GCC
Gly
>WENV180771964
ODIH01017423
304022
Bacillota
GCC
Gly
>WENV180771506
ODIH01004409
304022
Bacillota
GCC
Gly
>WENV180771478
ODIH01004210
304022
Bacillota
GCC
Gly
>WENV180771316
ODIH01002706
304022
Bacillota
GCC
Gly
>WENV180771211
ODIH01002248
429443
Bacillota
GCA
Cys
>WENV180770588
ODIH01000373
59312
Bacillota
CAG
Leu
>WENV180772228
ODIH01043096
238910
Bacillota
CTT
Lys
>WENV180771651
ODIH01006545
238910
Bacillota
CTT
Lys
>WENV180771418
ODIH01003530
238910
Bacillota
CTT
Lys
>WENV180771394
ODIH01003297
238910
Bacillota
CTT
Lys
>WENV180770396
ODIH01000161
338147
Bacillota
CTC
Glu
>WENV180770345
ODIH01000133
338147
Bacillota
CTC
Glu
>WENV180770283
ODIH01000089
338147
Bacillota
CTC
Glu
>WENV180772471
ODIH01095190
235150
Bacillota
TGC
Ala
>WENV180772904
ODIH01348888
235137
Bacillota
TGC
Ala
>WENV180772786
ODIH01251925
235137
Bacillota
TGC
Ala
>WENV180772191
ODIH01035653
235137
Bacillota
TGC
Ala
>WENV180771309
ODIH01002652
293599
Bacillota
CTT
Lys
>WENV180771273
ODIH01002501
293599
Bacillota
CTT
Lys
>WENV180772585
ODIH01132964
345329
Bacillota
TTC
Glu
>WENV180772831
ODIH01292810
338143
Bacillota
CTC
Glu
>WENV180771865
ODIH01012481
235114
Bacillota
TTT
Lys
>WENV180770902
ODIH01000966
235114
Bacillota
TTT
Lys
>WENV180772559
ODIH01121248
388249
Bacillota
GCA
Cys
>WENV180772618
ODIH01148195
144668
Bacillota
GTC
Asp
>WENV180772604
ODIH01140792
144668
Bacillota
GTC
Asp
>WENV180771622
ODIH01005945
144668
Bacillota
GTC
Asp
>WENV180771950
ODIH01016558
429429
Bacillota
CCA
Trp
>WENV180771822
ODIH01011019
429429
Bacillota
CCA
Trp
>WENV180771587
ODIH01005282
429429
Bacillota
CCA
Trp
>WENV180771452
ODIH01003879
429429
Bacillota
CCA
Trp
>WENV180772810
ODIH01273247
313454
Bacillota
GAA
Phe
>WENV180772675
ODIH01176946
313454
Bacillota
GAA
Phe
>WENV180771105
ODIH01001650
313454
Bacillota
GAA
Phe
>WENV180770415
ODIH01000178
313454
Bacillota
GAA
Phe
>WENV180772923
ODIH01354896
41154
Bacillota
TAA
Leu
>WENV180770874
ODIH01000867
44859
Bacillota
AAG
Leu
>WENV180770873
ODIH01000867
44859
Bacillota
AAG
Leu
>WENV180772186
ODIH01034340
11034
Bacillota
GGA
Ser
>WENV180772911
ODIH01350231
235117
Bacillota
TAC
Val
>WENV180772875
ODIH01347355
235117
Bacillota
TAC
Val
>WENV180771479
ODIH01004210
235117
Bacillota
TAC
Val
>WENV180770537
ODIH01000296
156937
Bacillota
GTG
His
>WENV180772945
ODIH01355959
235079
Bacillota
GAA
Phe
>WENV180772581
ODIH01129171
235079
Bacillota
GAA
Phe
>WENV180772117
ODIH01027893
235079
Bacillota
GAA
Phe
>WENV180772079
ODIH01024680
235079
Bacillota
GAA
Phe
>WENV180771963
ODIH01017423
235079
Bacillota
GAA
Phe
>WENV180771689
ODIH01007352
235079
Bacillota
GAA
Phe
>WENV180771505
ODIH01004409
235079
Bacillota
GAA
Phe
>WENV180771315
ODIH01002706
235079
Bacillota
GAA
Phe
>WENV180772909
ODIH01350129
235087
Bacillota
TGC
Ala
>WENV180772017
ODIH01020359
173314
Bacillota
GAT
Ile
>WENV180771846
ODIH01011671
173314
Bacillota
GAT
Ile
>WENV180772642
ODIH01161663
338149
Bacillota
CTC
Glu
>WENV180772464
ODIH01093561
338149
Bacillota
CTC
Glu
>WENV180772024
ODIH01020742
338149
Bacillota
CTC
Glu
>WENV180771937
ODIH01015879
338149
Bacillota
CTC
Glu
>WENV180771470
ODIH01004071
338149
Bacillota
CTC
Glu
>WENV180770815
ODIH01000747
271471
Bacillota
GCC
Gly
>WENV180771920
ODIH01014795
245298
Bacillota
CGG
Pro
>WENV180771774
ODIH01009428
37269
Bacillota
TGA
Ser
>WENV180771346
ODIH01002936
37269
Bacillota
TGA
Ser
>WENV180771009
ODIH01001280
155089
Bacillota
CAT
Met
>WENV180771292
ODIH01002582
287000
Bacillota
GTT
Asn
>WENV180771169
ODIH01002000
287000
Bacillota
GTT
Asn
>WENV180772739
ODIH01221251
169968
Bacillota
CAT
Met
>WENV180772674
ODIH01176946
169968
Bacillota
CAT
Met
>WENV180771259
ODIH01002449
169968
Bacillota
CAT
Met
>WENV180770414
ODIH01000178
169968
Bacillota
CAT
Met
>WENV180771004
ODIH01001270
152149
Bacillota
GTG
His
>WENV180772335
ODIH01061177
162445
Bacillota
CAT
Met
>WENV180772374
ODIH01066994
201704
Bacillota
GAT
Ile
>WENV180770445
ODIH01000199
152492
Bacillota
GGG
Pro
>WENV180772068
ODIH01024026
235078
Bacillota
TAC
Val
>WENV180771610
ODIH01005688
235078
Bacillota
TAC
Val
>WENV180770609
ODIH01000413
235078
Bacillota
TAC
Val
>WENV180770473
ODIH01000233
235078
Bacillota
TAC
Val
>WENV180772396
ODIH01072051
153911
Bacillota
GAT
Ile
>WENV180770900
ODIH01000966
144610
Bacillota
GTG
His
>WENV180771613
ODIH01005688
240017
Bacillota
GCC
Gly
>WENV180770474
ODIH01000233
240017
Bacillota
GCC
Gly
>WENV180772329
ODIH01059766
411547
Bacillota
CTG
Gln
>WENV180771919
ODIH01014795
411547
Bacillota
CTG
Gln
>WENV180771590
ODIH01005347
411547
Bacillota
CTG
Gln
>WENV180771491
ODIH01004270
411547
Bacillota
CTG
Gln
>WENV180772192
ODIH01035856
147684
Bacillota
ACG
Arg
>WENV180771560
ODIH01004895
147684
Bacillota
ACG
Arg
>WENV180770879
ODIH01000891
147684
Bacillota
ACG
Arg
>WENV180772843
ODIH01304339
4624
Bacillota
GCT
Ser
>WENV180771388
ODIH01003288
263765
Bacillota
TAC
Val
>WENV180771116
ODIH01001718
263765
Bacillota
TAC
Val
>WENV180770813
ODIH01000747
263765
Bacillota
TAC
Val
>WENV180770727
ODIH01000612
263765
Bacillota
TAC
Val
>WENV180770795
ODIH01000728
412387
Bacillota
GCA
Cys
>WENV180770794
ODIH01000728
412387
Bacillota
GCA
Cys
>WENV180771030
ODIH01001376
313104
Bacillota
TAC
Val
>WENV180771948
ODIH01016407
235095
Bacillota
GGT
Thr
>WENV180771947
ODIH01016407
235095
Bacillota
GGT
Thr
>WENV180771945
ODIH01016407
235095
Bacillota
GGT
Thr
>WENV180771853
ODIH01011884
235095
Bacillota
GGT
Thr
>WENV180770167
ODIH01000032
419639
Bacillota
GCA
Cys
>WENV180771654
ODIH01006627
411549
Bacillota
TTG
Gln
>WENV180771636
ODIH01006397
411549
Bacillota
TTG
Gln
>WENV180770489
ODIH01000251
235142
Bacillota
CTT
Lys
>WENV180770273
ODIH01000078
235142
Bacillota
CTT
Lys
>WENV180771397
ODIH01003297
245386
Bacillota
CCA
Trp
>WENV180772506
ODIH01107877
59296
Bacillota
AAG
Leu
>WENV180772939
ODIH01355894
148188
Bacillota
CCG
Arg
>WENV180772593
ODIH01137301
148188
Bacillota
CCG
Arg
>WENV180771581
ODIH01005217
148188
Bacillota
CCG
Arg
>WENV180771557
ODIH01004876
148188
Bacillota
CCG
Arg
>WENV180771892
ODIH01013608
80612
Bacillota
GTA
Tyr
>WENV180771838
ODIH01011515
80612
Bacillota
GTA
Tyr
>WENV180771433
ODIH01003655
235127
Bacillota
TTT
Lys
>WENV180770894
ODIH01000955
235127
Bacillota
TTT
Lys
>WENV180770528
ODIH01000291
235127
Bacillota
TTT
Lys
>WENV180770296
ODIH01000105
235127
Bacillota
TTT
Lys
>WENV180771430
ODIH01003655
147674
Bacillota
TCT
Arg
>WENV180770525
ODIH01000291
147674
Bacillota
TCT
Arg
>WENV180772753
ODIH01227618
298620
Bacillota
CAT
Met
>WENV180772658
ODIH01168664
241432
Bacillota
TGT
Thr
>WENV180772161
ODIH01031895
241432
Bacillota
TGT
Thr
>WENV180772551
ODIH01119390
235124
Bacillota
TGG
Pro
>WENV180772173
ODIH01032756
235124
Bacillota
TGG
Pro
>WENV180771504
ODIH01004370
235124
Bacillota
TGG
Pro
>WENV180772710
ODIH01195366
345314
Bacillota
TTG
Gln
>WENV180772045
ODIH01022380
338129
Bacillota
TGT
Thr
>WENV180772930
ODIH01355528
157838
Bacillota
GTC
Asp
>WENV180770262
ODIH01000067
157838
Bacillota
GTC
Asp
>WENV180770201
ODIH01000042
157838
Bacillota
GTC
Asp
>WENV180772369
ODIH01066307
144583
Bacillota
ACG
Arg
>WENV180771921
ODIH01014803
144583
Bacillota
ACG
Arg
>WENV180772935
ODIH01355774
144652
Bacillota
GTC
Asp
>WENV180771493
ODIH01004295
144652
Bacillota
GTC
Asp
>WENV180772681
ODIH01180269
247734
Bacillota
TGC
Ala
>WENV180771713
ODIH01008172
419877
Bacillota
TCC
Gly
>WENV180771979
ODIH01018170
419877
Bacillota
TCC
Gly
>WENV180771889
ODIH01013477
235171
Bacillota
CCA
Trp
>WENV180771874
ODIH01012959
238974
Bacillota
GAA
Phe
>WENV180771712
ODIH01008172
238974
Bacillota
GAA
Phe
>WENV180772487
ODIH01100597
144621
Bacillota
GTT
Asn
>WENV180772025
ODIH01020742
144621
Bacillota
GTT
Asn
>WENV180771938
ODIH01015879
144621
Bacillota
GTT
Asn
>WENV180771471
ODIH01004071
144621
Bacillota
GTT
Asn
>WENV180771467
ODIH01004047
144621
Bacillota
GTT
Asn
>WENV180771864
ODIH01012481
235113
Bacillota
GAA
Phe
>WENV180770734
ODIH01000622
235113
Bacillota
GAA
Phe
>WENV180770094
ODIH01000005
277200
Bacillota
GGC
Ala
>WENV180770256
ODIH01000064
243098
Bacillota
GGT
Thr
>WENV180772917
ODIH01354001
58712
Bacillota
CAG
Leu
>WENV180772207
ODIH01038952
58712
Bacillota
CAG
Leu
>WENV180772000
ODIH01019707
58712
Bacillota
CAG
Leu
>WENV180772249
ODIH01045900
21693
Bacillota
GCT
Ser
>WENV180771973
ODIH01017747
21693
Bacillota
GCT
Ser
>WENV180771574
ODIH01005016
245296
Bacillota
CCC
Gly
>WENV180772932
ODIH01355609
272992
Bacillota
CTT
Lys
>WENV180772465
ODIH01093561
272992
Bacillota
CTT
Lys
>WENV180772318
ODIH01058050
272992
Bacillota
CTT
Lys
>WENV180771788
ODIH01009762
272992
Bacillota
CTT
Lys
>WENV180770166
ODIH01000032
344240
Bacillota
GCC
Gly
>WENV180770161
ODIH01000032
344240
Bacillota
GCC
Gly
>WENV180770095
ODIH01000005
344240
Bacillota
GCC
Gly
>WENV180770173
ODIH01000033
196632
Bacillota
GTC
Asp
>WENV180770164
ODIH01000032
196632
Bacillota
GTC
Asp
>WENV180770159
ODIH01000032
196632
Bacillota
GTC
Asp
>WENV180772094
ODIH01026155
299139
Bacillota
TGC
Ala
>WENV180771845
ODIH01011671
299139
Bacillota
TGC
Ala
>WENV180771715
ODIH01008195
144594
Bacillota
CAC
Val
>WENV180771453
ODIH01003892
144594
Bacillota
CAC
Val
>WENV180771862
ODIH01012481
95563
Bacillota
GTA
Tyr
>WENV180770904
ODIH01000972
95563
Bacillota
GTA
Tyr
>WENV180770712
ODIH01000589
272488
Bacillota
GAA
Phe
>WENV180772515
ODIH01109587
114075
Bacillota
TAG
Leu
>WENV180770261
ODIH01000067
263523
Bacillota
TAC
Val
>WENV180772647
ODIH01162450
338131
Bacillota
GCC
Gly
>WENV180771849
ODIH01011709
338128
Bacillota
TTC
Glu
>WENV180770174
ODIH01000033
245344
Bacillota
GAA
Phe
>WENV180770165
ODIH01000032
245344
Bacillota
GAA
Phe
>WENV180770160
ODIH01000032
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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