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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181206796
OFAW01007664
45772
Euryarchaeota
GAG
Leu
>WENV181206646
OFAW01000871
45249
Euryarchaeota
TAG
Leu
>WENV181206771
OFAW01005159
45249
Euryarchaeota
TAG
Leu
>WENV181206724
OFAW01003028
243048
Euryarchaeota
TCC
Gly
>WENV181206544
OFAW01000046
45250
Euryarchaeota
GAG
Leu
>WENV181206822
OFAW01011942
238515
Euryarchaeota
TGC
Ala
>WENV181206591
OFAW01000375
147783
Euryarchaeota
TTT
Lys
>WENV181206723
OFAW01003028
243047
Euryarchaeota
GCC
Gly
>WENV181206753
OFAW01004118
127158
Euryarchaeota
GAT
Ile
>WENV181206624
OFAW01000649
151983
Euryarchaeota
GAC
Val
>WENV181206611
OFAW01000509
127155
Euryarchaeota
TCT
Arg
>WENV181206767
OFAW01004973
127815
Euryarchaeota
GTC
Asp
>WENV181206583
OFAW01000289
127815
Euryarchaeota
GTC
Asp
>WENV181206572
OFAW01000189
147788
Euryarchaeota
TAC
Val
>WENV181206649
OFAW01000882
243045
Euryarchaeota
TGC
Ala
>WENV181206764
OFAW01004835
127814
Euryarchaeota
TTC
Glu
>WENV181206670
OFAW01001402
151981
Euryarchaeota
TAC
Val
>WENV181206636
OFAW01000740
147790
Euryarchaeota
GGC
Ala
>WENV181206657
OFAW01001213
151979
Euryarchaeota
GAA
Phe
>WENV181206648
OFAW01000871
151979
Euryarchaeota
GAA
Phe
>WENV181206588
OFAW01000375
147780
Euryarchaeota
TGT
Thr
>WENV181206601
OFAW01000438
45773
Euryarchaeota
TAA
Leu
>WENV181206774
OFAW01005552
151978
Euryarchaeota
GGG
Pro
>WENV181206795
OFAW01007664
243046
Euryarchaeota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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