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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729530
PJTQ01060949
237201
Alphaproteobacteria
CAT
Met
>WENV183728660
PJTQ01000253
266516
Alphaproteobacteria
TAC
Val
>WENV183729048
PJTQ01003241
426418
Alphaproteobacteria
CTG
Gln
>WENV183729402
PJTQ01035201
339149
Alphaproteobacteria
GTT
Asn
>WENV183728610
PJTQ01000186
96238
Alphaproteobacteria
GAG
Leu
>WENV183728973
PJTQ01001651
96238
Alphaproteobacteria
GAG
Leu
>WENV183728559
PJTQ01000138
268154
Alphaproteobacteria
TGT
Thr
>WENV183728570
PJTQ01000144
146819
Alphaproteobacteria
TTT
Lys
>WENV183728249
PJTQ01000005
237800
Alphaproteobacteria
>WENV183729384
PJTQ01031391
146864
Alphaproteobacteria
TGG
Pro
>WENV183729318
PJTQ01021793
237489
Alphaproteobacteria
CAT
Met
>WENV183728612
PJTQ01000186
267922
Alphaproteobacteria
CCA
Trp
>WENV183729424
PJTQ01037869
146903
Alphaproteobacteria
CCT
Arg
>WENV183729296
PJTQ01019364
147152
Alphaproteobacteria
ACG
Arg
>WENV183728279
PJTQ01000009
147152
Alphaproteobacteria
ACG
Arg
>WENV183729521
PJTQ01058705
144964
Alphaproteobacteria
TGG
Pro
>WENV183729021
PJTQ01002505
375044
Alphaproteobacteria
GCC
Gly
>WENV183728219
PJTQ01000002
375044
Alphaproteobacteria
GCC
Gly
>WENV183728447
PJTQ01000057
23605
Alphaproteobacteria
CGA
Ser
>WENV183729478
PJTQ01048478
339325
Alphaproteobacteria
CAC
Val
>WENV183728304
PJTQ01000012
114616
Alphaproteobacteria
GTA
Tyr
>WENV183729587
PJTQ01080657
146875
Alphaproteobacteria
GTG
His
>WENV183729545
PJTQ01064209
146875
Alphaproteobacteria
GTG
His
>WENV183728301
PJTQ01000011
31286
Alphaproteobacteria
GGA
Ser
>WENV183729376
PJTQ01030594
237197
Alphaproteobacteria
CCA
Trp
>WENV183729046
PJTQ01003194
237197
Alphaproteobacteria
CCA
Trp
>WENV183729327
PJTQ01022258
23718
Alphaproteobacteria
GGA
Ser
>WENV183729417
PJTQ01037019
368245
Alphaproteobacteria
>WENV183728317
PJTQ01000015
95916
Alphaproteobacteria
TAG
Leu
>WENV183729038
PJTQ01002943
16408
Alphaproteobacteria
GGA
Ser
>WENV183729505
PJTQ01055103
185767
Alphaproteobacteria
CCG
Arg
>WENV183729158
PJTQ01007517
95928
Alphaproteobacteria
TAG
Leu
>WENV183729164
PJTQ01007829
159426
Alphaproteobacteria
CAT
Met
>WENV183729588
PJTQ01080860
23620
Alphaproteobacteria
GCT
Ser
>WENV183728476
PJTQ01000069
339434
Alphaproteobacteria
CCC
Gly
>WENV183729180
PJTQ01009147
340310
Alphaproteobacteria
CAC
Val
>WENV183728214
PJTQ01000001
166353
Alphaproteobacteria
ACG
Arg
>WENV183729401
PJTQ01035201
412154
Alphaproteobacteria
GCA
Cys
>WENV183729452
PJTQ01041490
339490
Alphaproteobacteria
GAC
Val
>WENV183729125
PJTQ01005584
146854
Alphaproteobacteria
CCT
Arg
>WENV183728321
PJTQ01000015
146820
Alphaproteobacteria
CGG
Pro
>WENV183729352
PJTQ01026069
23842
Alphaproteobacteria
CGA
Ser
>WENV183728453
PJTQ01000058
146818
Alphaproteobacteria
CAT
Met
>WENV183729560
PJTQ01068603
412260
Alphaproteobacteria
TCC
Gly
>WENV183728537
PJTQ01000116
339495
Alphaproteobacteria
>WENV183728302
PJTQ01000012
244489
Alphaproteobacteria
CTT
Lys
>WENV183729469
PJTQ01044970
253273
Alphaproteobacteria
CTT
Lys
>WENV183729561
PJTQ01069417
97145
Alphaproteobacteria
TAG
Leu
>WENV183728659
PJTQ01000253
97145
Alphaproteobacteria
TAG
Leu
>WENV183728908
PJTQ01001092
202028
Alphaproteobacteria
GTG
His
>WENV183729509
PJTQ01056804
340010
Alphaproteobacteria
TAC
Val
>WENV183729305
PJTQ01020729
378976
Alphaproteobacteria
GAC
Val
>WENV183728327
PJTQ01000015
153154
Alphaproteobacteria
TAC
Val
>WENV183728548
PJTQ01000126
339432
Alphaproteobacteria
GTT
Asn
>WENV183728475
PJTQ01000069
364533
Alphaproteobacteria
GCC
Gly
>WENV183729184
PJTQ01009320
130084
Alphaproteobacteria
GGG
Pro
>WENV183728631
PJTQ01000202
25533
Alphaproteobacteria
GGA
Ser
>WENV183728379
PJTQ01000034
237281
Alphaproteobacteria
CGT
Thr
>WENV183728753
PJTQ01000379
237281
Alphaproteobacteria
CGT
Thr
>WENV183729083
PJTQ01004053
148854
Alphaproteobacteria
GTC
Asp
>WENV183729130
PJTQ01005949
65244
Alphaproteobacteria
CAG
Leu
>WENV183729086
PJTQ01004171
152510
Alphaproteobacteria
GGG
Pro
>WENV183729578
PJTQ01074836
338622
Alphaproteobacteria
GTT
Asn
>WENV183729502
PJTQ01054251
338622
Alphaproteobacteria
GTT
Asn
>WENV183728250
PJTQ01000005
338622
Alphaproteobacteria
GTT
Asn
>WENV183728326
PJTQ01000015
10642
Alphaproteobacteria
GCT
Ser
>WENV183729449
PJTQ01041302
144972
Alphaproteobacteria
>WENV183728305
PJTQ01000012
424918
Alphaproteobacteria
TCC
Gly
>WENV183729196
PJTQ01010092
342905
Alphaproteobacteria
GGT
Thr
>WENV183728213
PJTQ01000001
257056
Alphaproteobacteria
CGT
Thr
>WENV183729113
PJTQ01005048
237479
Alphaproteobacteria
TTT
Lys
>WENV183728546
PJTQ01000126
339436
Alphaproteobacteria
>WENV183729465
PJTQ01044059
95936
Alphaproteobacteria
TAA
Leu
>WENV183729288
PJTQ01018243
23611
Alphaproteobacteria
CGA
Ser
>WENV183729080
PJTQ01004020
412153
Alphaproteobacteria
CTG
Gln
>WENV183729359
PJTQ01027506
23717
Alphaproteobacteria
TGA
Ser
>WENV183729552
PJTQ01065851
144969
Alphaproteobacteria
CGG
Pro
>WENV183729594
PJTQ01084849
267554
Alphaproteobacteria
TGC
Ala
>WENV183729335
PJTQ01023479
267554
Alphaproteobacteria
TGC
Ala
>WENV183729047
PJTQ01003229
154227
Alphaproteobacteria
CAT
Met
>WENV183728424
PJTQ01000049
428521
Alphaproteobacteria
CTG
Gln
>WENV183729556
PJTQ01067156
147289
Alphaproteobacteria
GTC
Asp
>WENV183729555
PJTQ01067156
147289
Alphaproteobacteria
GTC
Asp
>WENV183728462
PJTQ01000060
147289
Alphaproteobacteria
GTC
Asp
>WENV183728396
PJTQ01000041
147289
Alphaproteobacteria
GTC
Asp
>WENV183729337
PJTQ01024073
98423
Alphaproteobacteria
CAA
Leu
>WENV183729278
PJTQ01017469
95631
Alphaproteobacteria
TAG
Leu
>WENV183729043
PJTQ01003160
146848
Alphaproteobacteria
GTG
His
>WENV183728251
PJTQ01000005
101826
Alphaproteobacteria
TAG
Leu
>WENV183728450
PJTQ01000057
146817
Alphaproteobacteria
GTG
His
>WENV183728542
PJTQ01000121
237579
Alphaproteobacteria
CTT
Lys
>WENV183728448
PJTQ01000057
237439
Alphaproteobacteria
CTT
Lys
>WENV183729429
PJTQ01038463
411617
Alphaproteobacteria
GCA
Cys
>WENV183729250
PJTQ01015452
238639
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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