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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181414275
OGCL01000167
226192
Betaproteobacteria
GGG
Pro
>WENV181415596
OGCL01016086
226192
Betaproteobacteria
GGG
Pro
>WENV181414650
OGCL01000944
284938
Betaproteobacteria
TTT
Lys
>WENV181415799
OGCL01026307
195621
Betaproteobacteria
CAT
Met
>WENV181414768
OGCL01001301
227519
Betaproteobacteria
TTG
Gln
>WENV181415671
OGCL01018445
227519
Betaproteobacteria
TTG
Gln
>WENV181414108
OGCL01000017
29649
Betaproteobacteria
CGA
Ser
>WENV181414141
OGCL01000047
29649
Betaproteobacteria
CGA
Ser
>WENV181416565
OGCL01103188
301701
Betaproteobacteria
GTG
His
>WENV181416660
OGCL01122289
301701
Betaproteobacteria
GTG
His
>WENV181416005
OGCL01042339
357205
Betaproteobacteria
GGC
Ala
>WENV181415826
OGCL01028827
357205
Betaproteobacteria
GGC
Ala
>WENV181415593
OGCL01015969
357205
Betaproteobacteria
GGC
Ala
>WENV181415533
OGCL01013707
357205
Betaproteobacteria
GGC
Ala
>WENV181415174
OGCL01005187
357205
Betaproteobacteria
GGC
Ala
>WENV181414559
OGCL01000649
357205
Betaproteobacteria
GGC
Ala
>WENV181415738
OGCL01022289
83413
Betaproteobacteria
CAG
Leu
>WENV181416253
OGCL01065516
333120
Betaproteobacteria
CCA
Trp
>WENV181414604
OGCL01000779
333120
Betaproteobacteria
CCA
Trp
>WENV181414895
OGCL01002062
333120
Betaproteobacteria
CCA
Trp
>WENV181415759
OGCL01023859
333120
Betaproteobacteria
CCA
Trp
>WENV181416079
OGCL01047542
239724
Betaproteobacteria
CAT
Met
>WENV181415542
OGCL01014097
203178
Betaproteobacteria
GAT
Ile
>WENV181414975
OGCL01002631
194297
Betaproteobacteria
TTG
Gln
>WENV181416269
OGCL01066272
429429
Betaproteobacteria
CAC
Val
>WENV181415308
OGCL01007640
185257
Betaproteobacteria
CAT
Met
>WENV181416512
OGCL01096031
283006
Betaproteobacteria
GCC
Gly
>WENV181414942
OGCL01002416
192191
Betaproteobacteria
CAT
Met
>WENV181415186
OGCL01005473
192191
Betaproteobacteria
CAT
Met
>WENV181416071
OGCL01046940
323553
Betaproteobacteria
GTG
His
>WENV181414704
OGCL01001096
178217
Betaproteobacteria
TTG
Gln
>WENV181416324
OGCL01073569
281681
Betaproteobacteria
TTT
Lys
>WENV181416325
OGCL01073569
281681
Betaproteobacteria
TTT
Lys
>WENV181416326
OGCL01073569
281681
Betaproteobacteria
TTT
Lys
>WENV181414985
OGCL01002740
504008
Betaproteobacteria
GCA
Cys
>WENV181414189
OGCL01000087
13412
Betaproteobacteria
TAA
Leu
>WENV181414951
OGCL01002446
481266
Betaproteobacteria
GCA
Cys
>WENV181414778
OGCL01001349
120253
Betaproteobacteria
CAG
Leu
>WENV181414282
OGCL01000172
400288
Betaproteobacteria
CCT
Arg
>WENV181414534
OGCL01000587
400288
Betaproteobacteria
CCT
Arg
>WENV181415303
OGCL01007551
198132
Betaproteobacteria
CAT
Met
>WENV181414621
OGCL01000835
180485
Betaproteobacteria
CAT
Met
>WENV181416877
OGCL01171652
184269
Betaproteobacteria
TTG
Gln
>WENV181415147
OGCL01004837
342564
Betaproteobacteria
CGC
Ala
>WENV181414732
OGCL01001209
178982
Betaproteobacteria
TTG
Gln
>WENV181414318
OGCL01000203
224943
Betaproteobacteria
TTG
Gln
>WENV181415019
OGCL01003169
211214
Betaproteobacteria
CAT
Met
>WENV181415015
OGCL01003146
504022
Betaproteobacteria
TCC
Gly
>WENV181415707
OGCL01020251
504022
Betaproteobacteria
TCC
Gly
>WENV181414520
OGCL01000561
186768
Betaproteobacteria
>WENV181414712
OGCL01001129
355697
Betaproteobacteria
GCC
Gly
>WENV181414991
OGCL01002753
355697
Betaproteobacteria
GCC
Gly
>WENV181415670
OGCL01018384
355697
Betaproteobacteria
GCC
Gly
>WENV181414317
OGCL01000203
60914
Betaproteobacteria
TGA
Ser
>WENV181414165
OGCL01000069
355923
Betaproteobacteria
TTC
Glu
>WENV181414234
OGCL01000131
409406
Betaproteobacteria
GGT
Thr
>WENV181414898
OGCL01002084
5917
Betaproteobacteria
GCT
Ser
>WENV181416598
OGCL01110965
5917
Betaproteobacteria
GCT
Ser
>WENV181414794
OGCL01001394
20603
Betaproteobacteria
GGA
Ser
>WENV181414106
OGCL01000017
282943
Betaproteobacteria
CTT
Lys
>WENV181414455
OGCL01000404
282943
Betaproteobacteria
CTT
Lys
>WENV181414830
OGCL01001563
283018
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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