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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183682288
ORMF010420612
146578
Alphaproteobacteria
CGG
Pro
>WENV183692419
ORMF011913640
381781
Alphaproteobacteria
CAC
Val
>WENV183693328
ORMF012062949
116527
Alphaproteobacteria
CAA
Leu
>WENV183687659
ORMF011174880
152452
Alphaproteobacteria
ACG
Arg
>WENV183679376
ORMF010053952
412798
Alphaproteobacteria
CTG
Gln
>WENV183686442
ORMF011001748
293056
Alphaproteobacteria
TGC
Ala
>WENV183683073
ORMF010524953
238733
Alphaproteobacteria
CCA
Trp
>WENV183693855
ORMF012151345
413198
Alphaproteobacteria
TCC
Gly
>WENV183695166
ORMF012346908
66752
Alphaproteobacteria
CAG
Leu
>WENV183693815
ORMF012144212
366247
Alphaproteobacteria
TAC
Val
>WENV183683539
ORMF010587101
199776
Alphaproteobacteria
CGG
Pro
>WENV183687522
ORMF011158664
7609
Alphaproteobacteria
GCT
Ser
>WENV183694442
ORMF012234043
96897
Alphaproteobacteria
TAG
Leu
>WENV183689427
ORMF011437593
185767
Alphaproteobacteria
CCG
Arg
>WENV183692810
ORMF011979582
25534
Alphaproteobacteria
CGA
Ser
>WENV183679324
ORMF010047469
236134
Alphaproteobacteria
TAC
Val
>WENV183693757
ORMF012132620
340956
Alphaproteobacteria
TTG
Gln
>WENV183685015
ORMF010789929
340956
Alphaproteobacteria
TTG
Gln
>WENV183692215
ORMF011880773
359754
Alphaproteobacteria
TAC
Val
>WENV183687762
ORMF011186316
77433
Alphaproteobacteria
CAG
Leu
>WENV183684916
ORMF010774510
247224
Alphaproteobacteria
CGT
Thr
>WENV183680638
ORMF010206513
338496
Alphaproteobacteria
CAT
Met
>WENV183686337
ORMF010985873
412154
Alphaproteobacteria
GCA
Cys
>WENV183686460
ORMF011005289
163397
Alphaproteobacteria
TGG
Pro
>WENV183681407
ORMF010301777
163397
Alphaproteobacteria
TGG
Pro
>WENV183692998
ORMF012004974
175748
Alphaproteobacteria
CAT
Met
>WENV183680960
ORMF010244826
259252
Alphaproteobacteria
GGC
Ala
>WENV183683526
ORMF010585433
345492
Alphaproteobacteria
TAC
Val
>WENV183679213
ORMF010029403
345492
Alphaproteobacteria
TAC
Val
>WENV183684275
ORMF010686600
249907
Alphaproteobacteria
CGC
Ala
>WENV183691715
ORMF011806019
249907
Alphaproteobacteria
CGC
Ala
>WENV183689056
ORMF011385591
249907
Alphaproteobacteria
CGC
Ala
>WENV183693600
ORMF012107473
146929
Alphaproteobacteria
CCG
Arg
>WENV183681071
ORMF010258998
146929
Alphaproteobacteria
CCG
Arg
>WENV183680710
ORMF010213839
146929
Alphaproteobacteria
CCG
Arg
>WENV183679434
ORMF010062552
146929
Alphaproteobacteria
CCG
Arg
>WENV183695960
ORMF012476898
131431
Alphaproteobacteria
GGG
Pro
>WENV183692714
ORMF011964431
131431
Alphaproteobacteria
GGG
Pro
>WENV183692200
ORMF011878309
131431
Alphaproteobacteria
GGG
Pro
>WENV183691971
ORMF011844677
131431
Alphaproteobacteria
GGG
Pro
>WENV183681637
ORMF010339924
131431
Alphaproteobacteria
GGG
Pro
>WENV183680898
ORMF010236908
131431
Alphaproteobacteria
GGG
Pro
>WENV183686397
ORMF010994334
202028
Alphaproteobacteria
GTG
His
>WENV183695086
ORMF012332435
338268
Alphaproteobacteria
GAC
Val
>WENV183681002
ORMF010249897
104569
Alphaproteobacteria
TAG
Leu
>WENV183695468
ORMF012397184
342876
Alphaproteobacteria
GAC
Val
>WENV183691901
ORMF011837147
342876
Alphaproteobacteria
GAC
Val
>WENV183690270
ORMF011570162
342876
Alphaproteobacteria
GAC
Val
>WENV183688911
ORMF011362057
342876
Alphaproteobacteria
GAC
Val
>WENV183686229
ORMF010967445
342876
Alphaproteobacteria
GAC
Val
>WENV183693284
ORMF012055382
148845
Alphaproteobacteria
GGG
Pro
>WENV183692866
ORMF011986371
159427
Alphaproteobacteria
GTG
His
>WENV183695546
ORMF012407484
164825
Alphaproteobacteria
GAT
Ile
>WENV183686441
ORMF011001748
164825
Alphaproteobacteria
GAT
Ile
>WENV183681284
ORMF010284114
164825
Alphaproteobacteria
GAT
Ile
>WENV183680724
ORMF010215835
164825
Alphaproteobacteria
GAT
Ile
>WENV183686452
ORMF011003216
257082
Alphaproteobacteria
TAC
Val
>WENV183679139
ORMF010020879
257082
Alphaproteobacteria
TAC
Val
>WENV183694471
ORMF012239391
289655
Alphaproteobacteria
GGC
Ala
>WENV183694470
ORMF012239391
289655
Alphaproteobacteria
GGC
Ala
>WENV183687838
ORMF011197666
289655
Alphaproteobacteria
GGC
Ala
>WENV183687837
ORMF011197666
289655
Alphaproteobacteria
GGC
Ala
>WENV183685848
ORMF010911014
289655
Alphaproteobacteria
GGC
Ala
>WENV183687792
ORMF011191590
59164
Alphaproteobacteria
GAG
Leu
>WENV183687596
ORMF011166823
59164
Alphaproteobacteria
GAG
Leu
>WENV183685155
ORMF010813576
148425
Alphaproteobacteria
ACG
Arg
>WENV183689915
ORMF011513540
148425
Alphaproteobacteria
ACG
Arg
>WENV183696286
ORMF012533457
279830
Alphaproteobacteria
TAC
Val
>WENV183689348
ORMF011425826
279830
Alphaproteobacteria
TAC
Val
>WENV183689347
ORMF011425811
279830
Alphaproteobacteria
TAC
Val
>WENV183686592
ORMF011025977
279830
Alphaproteobacteria
TAC
Val
>WENV183682235
ORMF010414199
279830
Alphaproteobacteria
TAC
Val
>WENV183687862
ORMF011200706
187569
Alphaproteobacteria
CCG
Arg
>WENV183687854
ORMF011199723
239160
Alphaproteobacteria
CGT
Thr
>WENV183687145
ORMF011103242
239160
Alphaproteobacteria
CGT
Thr
>WENV183686821
ORMF011056610
239160
Alphaproteobacteria
CGT
Thr
>WENV183686451
ORMF011003070
239160
Alphaproteobacteria
CGT
Thr
>WENV183681705
ORMF010347858
239160
Alphaproteobacteria
CGT
Thr
>WENV183681312
ORMF010287892
239160
Alphaproteobacteria
CGT
Thr
>WENV183679793
ORMF010105126
239160
Alphaproteobacteria
CGT
Thr
>WENV183679845
ORMF010112100
318048
Alphaproteobacteria
CCA
Trp
>WENV183692696
ORMF011961819
303842
Alphaproteobacteria
TAC
Val
>WENV183688089
ORMF011233063
30071
Alphaproteobacteria
CGA
Ser
>WENV183682729
ORMF010483891
30071
Alphaproteobacteria
CGA
Ser
>WENV183682756
ORMF010486014
401200
Alphaproteobacteria
GTT
Asn
>WENV183684074
ORMF010658560
352138
Alphaproteobacteria
TTG
Gln
>WENV183684008
ORMF010650798
352138
Alphaproteobacteria
TTG
Gln
>WENV183683003
ORMF010515009
166738
Alphaproteobacteria
CCT
Arg
>WENV183688672
ORMF011323199
259072
Alphaproteobacteria
CGC
Ala
>WENV183695409
ORMF012386875
342846
Alphaproteobacteria
GAC
Val
>WENV183681270
ORMF010282244
342846
Alphaproteobacteria
GAC
Val
>WENV183679643
ORMF010090484
255832
Alphaproteobacteria
CGC
Ala
>WENV183680406
ORMF010176650
316120
Alphaproteobacteria
TGC
Ala
>WENV183686175
ORMF010960532
388882
Alphaproteobacteria
GCC
Gly
>WENV183693720
ORMF012126708
193837
Alphaproteobacteria
CAT
Met
>WENV183680879
ORMF010234783
193837
Alphaproteobacteria
CAT
Met
>WENV183696412
ORMF012550449
26417
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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