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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
165 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180139852
OATT01001226
24650
Bacillota
TAA
Leu
>WENV180140054
OATT01004980
243647
Bacillota
TTT
Lys
>WENV180140241
OATT01017915
361659
Bacillota
GCC
Gly
>WENV180140233
OATT01017845
202812
Bacillota
CAT
Met
>WENV180139998
OATT01002894
37213
Bacillota
TGA
Ser
>WENV180139284
OATT01000003
267649
Bacillota
TAC
Val
>WENV180139286
OATT01000003
267649
Bacillota
TAC
Val
>WENV180139477
OATT01000197
267649
Bacillota
TAC
Val
>WENV180139618
OATT01000482
267649
Bacillota
TAC
Val
>WENV180139828
OATT01001049
267649
Bacillota
TAC
Val
>WENV180140122
OATT01007400
267649
Bacillota
TAC
Val
>WENV180140341
OATT01060840
235287
Bacillota
TTT
Lys
>WENV180140133
OATT01007822
339890
Bacillota
TTG
Gln
>WENV180139814
OATT01001002
339890
Bacillota
TTG
Gln
>WENV180139641
OATT01000509
339890
Bacillota
TTG
Gln
>WENV180139468
OATT01000176
339890
Bacillota
TTG
Gln
>WENV180139593
OATT01000408
338152
Bacillota
TTC
Glu
>WENV180139591
OATT01000408
338152
Bacillota
TTC
Glu
>WENV180140281
OATT01028163
237387
Bacillota
TGT
Thr
>WENV180140260
OATT01023173
237387
Bacillota
TGT
Thr
>WENV180139696
OATT01000628
23769
Bacillota
TAA
Leu
>WENV180140342
OATT01060842
235154
Bacillota
GTT
Asn
>WENV180140230
OATT01017257
241441
Bacillota
GCC
Gly
>WENV180139770
OATT01000827
429443
Bacillota
GCA
Cys
>WENV180140142
OATT01008400
246023
Bacillota
TGC
Ala
>WENV180139368
OATT01000050
59312
Bacillota
CAG
Leu
>WENV180139367
OATT01000050
59312
Bacillota
CAG
Leu
>WENV180139779
OATT01000863
97943
Bacillota
GTA
Tyr
>WENV180139776
OATT01000863
97943
Bacillota
GTA
Tyr
>WENV180139774
OATT01000863
97943
Bacillota
GTA
Tyr
>WENV180140240
OATT01017915
114359
Bacillota
TAG
Leu
>WENV180140140
OATT01008371
235137
Bacillota
TGC
Ala
>WENV180140344
OATT01060875
235294
Bacillota
TGC
Ala
>WENV180140227
OATT01017102
338208
Bacillota
>WENV180139864
OATT01001275
340802
Bacillota
TTG
Gln
>WENV180139322
OATT01000016
340802
Bacillota
TTG
Gln
>WENV180140267
OATT01024778
338143
Bacillota
CTC
Glu
>WENV180139794
OATT01000914
338143
Bacillota
CTC
Glu
>WENV180139726
OATT01000706
338143
Bacillota
CTC
Glu
>WENV180139725
OATT01000706
338143
Bacillota
CTC
Glu
>WENV180140118
OATT01007149
23437
Bacillota
GGA
Ser
>WENV180139386
OATT01000062
361897
Bacillota
CTC
Glu
>WENV180139385
OATT01000062
361897
Bacillota
CTC
Glu
>WENV180139384
OATT01000062
361897
Bacillota
CTC
Glu
>WENV180140198
OATT01013640
341763
Bacillota
CTC
Glu
>WENV180139867
OATT01001330
388249
Bacillota
GCA
Cys
>WENV180139850
OATT01001226
144668
Bacillota
GTC
Asp
>WENV180140226
OATT01017102
116350
Bacillota
TAG
Leu
>WENV180139481
OATT01000201
198770
Bacillota
GTC
Asp
>WENV180139399
OATT01000078
429429
Bacillota
CCA
Trp
>WENV180139820
OATT01001011
41154
Bacillota
TAA
Leu
>WENV180139509
OATT01000250
41154
Bacillota
TAA
Leu
>WENV180139442
OATT01000122
41154
Bacillota
TAA
Leu
>WENV180139706
OATT01000660
16834
Bacillota
GCT
Ser
>WENV180139588
OATT01000397
186380
Bacillota
GTC
Asp
>WENV180139585
OATT01000397
186380
Bacillota
GTC
Asp
>WENV180139581
OATT01000397
186380
Bacillota
GTC
Asp
>WENV180140352
OATT01060936
247057
Bacillota
TGC
Ala
>WENV180140321
OATT01059630
235290
Bacillota
TTG
Gln
>WENV180139788
OATT01000896
114002
Bacillota
CAA
Leu
>WENV180139672
OATT01000523
338550
Bacillota
>WENV180139671
OATT01000523
338550
Bacillota
>WENV180139670
OATT01000523
338550
Bacillota
>WENV180139517
OATT01000258
37437
Bacillota
TAA
Leu
>WENV180140110
OATT01007023
144763
Bacillota
TGG
Pro
>WENV180140163
OATT01009034
162028
Bacillota
ACG
Arg
>WENV180139987
OATT01002709
162028
Bacillota
ACG
Arg
>WENV180139932
OATT01002011
162028
Bacillota
ACG
Arg
>WENV180140056
OATT01004980
243612
Bacillota
TAC
Val
>WENV180140303
OATT01037623
149041
Bacillota
GTC
Asp
>WENV180140108
OATT01007023
144766
Bacillota
CAT
Met
>WENV180139654
OATT01000519
144766
Bacillota
CAT
Met
>WENV180140174
OATT01010346
37269
Bacillota
TGA
Ser
>WENV180140083
OATT01006090
37269
Bacillota
TGA
Ser
>WENV180139836
OATT01001084
37269
Bacillota
TGA
Ser
>WENV180139471
OATT01000179
37269
Bacillota
TGA
Ser
>WENV180139466
OATT01000170
37269
Bacillota
TGA
Ser
>WENV180140123
OATT01007400
155089
Bacillota
CAT
Met
>WENV180139834
OATT01001072
155089
Bacillota
CAT
Met
>WENV180139619
OATT01000482
155089
Bacillota
CAT
Met
>WENV180140351
OATT01060935
287000
Bacillota
GTT
Asn
>WENV180139622
OATT01000487
169968
Bacillota
CAT
Met
>WENV180140141
OATT01008400
201704
Bacillota
GAT
Ile
>WENV180139398
OATT01000077
152492
Bacillota
GGG
Pro
>WENV180140112
OATT01007023
411585
Bacillota
GCA
Cys
>WENV180140095
OATT01006358
147135
Bacillota
ACG
Arg
>WENV180139595
OATT01000420
353537
Bacillota
GTT
Asn
>WENV180140202
OATT01014164
147684
Bacillota
ACG
Arg
>WENV180139777
OATT01000863
263765
Bacillota
TAC
Val
>WENV180139587
OATT01000397
263765
Bacillota
TAC
Val
>WENV180139584
OATT01000397
263765
Bacillota
TAC
Val
>WENV180139580
OATT01000397
263765
Bacillota
TAC
Val
>WENV180139474
OATT01000184
342895
Bacillota
CAT
Met
>WENV180140084
OATT01006090
10680
Bacillota
GGA
Ser
>WENV180139629
OATT01000498
412387
Bacillota
GCA
Cys
>WENV180139628
OATT01000498
412387
Bacillota
GCA
Cys
>WENV180139594
OATT01000408
412387
Bacillota
GCA
Cys
>WENV180139592
OATT01000408
412387
Bacillota
GCA
Cys
>WENV180140325
OATT01059733
411584
Bacillota
TCC
Gly
>WENV180139691
OATT01000626
18852
Bacillota
GCT
Ser
>WENV180139680
OATT01000588
18852
Bacillota
GCT
Ser
>WENV180139526
OATT01000270
18852
Bacillota
GCT
Ser
>WENV180139614
OATT01000481
194150
Bacillota
TGG
Pro
>WENV180139479
OATT01000201
239832
Bacillota
TGT
Thr
>WENV180140324
OATT01059657
198159
Bacillota
CAT
Met
>WENV180139733
OATT01000725
150597
Bacillota
TCT
Arg
>WENV180140001
OATT01002937
250349
Bacillota
GAA
Phe
>WENV180139986
OATT01002709
37193
Bacillota
TAA
Leu
>WENV180140223
OATT01017102
235289
Bacillota
GTT
Asn
>WENV180140064
OATT01005129
235289
Bacillota
GTT
Asn
>WENV180140015
OATT01003335
235289
Bacillota
GTT
Asn
>WENV180139959
OATT01002310
59296
Bacillota
AAG
Leu
>WENV180140111
OATT01007023
144767
Bacillota
GTG
His
>WENV180140306
OATT01043435
389572
Bacillota
>WENV180140224
OATT01017102
389572
Bacillota
>WENV180140065
OATT01005129
389572
Bacillota
>WENV180140183
OATT01012121
298639
Bacillota
GTT
Asn
>WENV180140117
OATT01007071
236012
Bacillota
GTC
Asp
>WENV180140000
OATT01002937
235197
Bacillota
GTC
Asp
>WENV180139997
OATT01002872
368876
Bacillota
GCC
Gly
>WENV180139512
OATT01000254
147674
Bacillota
TCT
Arg
>WENV180140073
OATT01005502
298620
Bacillota
CAT
Met
>WENV180140114
OATT01007023
235288
Bacillota
TAC
Val
>WENV180139661
OATT01000519
235288
Bacillota
TAC
Val
>WENV180140313
OATT01051583
411739
Bacillota
TCC
Gly
>WENV180140235
OATT01017915
411739
Bacillota
TCC
Gly
>WENV180139806
OATT01000977
411739
Bacillota
TCC
Gly
>WENV180139805
OATT01000977
411739
Bacillota
TCC
Gly
>WENV180139732
OATT01000725
411739
Bacillota
TCC
Gly
>WENV180140189
OATT01012617
235638
Bacillota
GAA
Phe
>WENV180139906
OATT01001627
235638
Bacillota
GAA
Phe
>WENV180139656
OATT01000519
163753
Bacillota
TGG
Pro
>WENV180140239
OATT01017915
237963
Bacillota
TTT
Lys
>WENV180140032
OATT01003983
237963
Bacillota
TTT
Lys
>WENV180139734
OATT01000725
237963
Bacillota
TTT
Lys
>WENV180140236
OATT01017915
201667
Bacillota
TCT
Arg
>WENV180140237
OATT01017915
279635
Bacillota
GTG
His
>WENV180140102
OATT01006544
243613
Bacillota
GTG
His
>WENV180139955
OATT01002271
144672
Bacillota
TCT
Arg
>WENV180139505
OATT01000246
144672
Bacillota
TCT
Arg
>WENV180140270
OATT01025496
144652
Bacillota
GTC
Asp
>WENV180139868
OATT01001352
419877
Bacillota
TCC
Gly
>WENV180139861
OATT01001275
419877
Bacillota
TCC
Gly
>WENV180140314
OATT01051583
145383
Bacillota
TCT
Arg
>WENV180140249
OATT01018651
152491
Bacillota
CAT
Met
>WENV180139731
OATT01000725
353527
Bacillota
TTC
Glu
>WENV180139586
OATT01000397
353527
Bacillota
TTC
Glu
>WENV180139583
OATT01000397
353527
Bacillota
TTC
Glu
>WENV180139579
OATT01000397
353527
Bacillota
TTC
Glu
>WENV180139879
OATT01001418
144762
Bacillota
TCT
Arg
>WENV180139649
OATT01000519
144762
Bacillota
TCT
Arg
>WENV180139602
OATT01000455
144762
Bacillota
TCT
Arg
>WENV180139924
OATT01001812
273029
Bacillota
TGT
Thr
>WENV180140248
OATT01018651
281472
Bacillota
GGT
Thr
>WENV180139616
OATT01000481
178024
Bacillota
TCT
Arg
>WENV180140066
OATT01005207
299139
Bacillota
TGC
Ala
>WENV180139976
OATT01002481
413657
Bacillota
CCC
Gly
>WENV180139623
OATT01000487
272488
Bacillota
GAA
Phe
>WENV180139421
OATT01000109
272488
Bacillota
GAA
Phe
>WENV180139904
OATT01001589
119513
Bacillota
CAA
Leu
>WENV180140330
OATT01059799
146770
Bacillota
TTC
Glu
>WENV180140101
OATT01006531
338131
Bacillota
GCC
Gly
>WENV180139539
OATT01000312
338131
Bacillota
GCC
Gly
>WENV180139432
OATT01000118
338131
Bacillota
GCC
Gly
>WENV180140262
OATT01023173
237388
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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