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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
170 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180425791
OBVY01001800
24650
Bacillota
TAA
Leu
>WENV180425860
OBVY01002220
243647
Bacillota
TTT
Lys
>WENV180426266
OBVY01016045
361659
Bacillota
GCC
Gly
>WENV180425622
OBVY01000947
144612
Bacillota
TCT
Arg
>WENV180426276
OBVY01017201
144612
Bacillota
TCT
Arg
>WENV180425121
OBVY01000114
267649
Bacillota
TAC
Val
>WENV180425567
OBVY01000791
267649
Bacillota
TAC
Val
>WENV180425569
OBVY01000791
267649
Bacillota
TAC
Val
>WENV180426283
OBVY01017658
267649
Bacillota
TAC
Val
>WENV180424959
OBVY01000014
235134
Bacillota
GAA
Phe
>WENV180425889
OBVY01002566
267556
Bacillota
TAC
Val
>WENV180425392
OBVY01000398
267556
Bacillota
TAC
Val
>WENV180425384
OBVY01000388
267556
Bacillota
TAC
Val
>WENV180425654
OBVY01001020
339890
Bacillota
TTG
Gln
>WENV180425748
OBVY01001624
235098
Bacillota
GAC
Val
>WENV180425612
OBVY01000897
235098
Bacillota
GAC
Val
>WENV180425249
OBVY01000218
338152
Bacillota
TTC
Glu
>WENV180425963
OBVY01003345
148239
Bacillota
TCT
Arg
>WENV180425255
OBVY01000221
148239
Bacillota
TCT
Arg
>WENV180425347
OBVY01000332
44854
Bacillota
TGA
Ser
>WENV180426370
OBVY01037349
235154
Bacillota
GTT
Asn
>WENV180426355
OBVY01032439
37549
Bacillota
TAA
Leu
>WENV180425284
OBVY01000254
59312
Bacillota
CAG
Leu
>WENV180426354
OBVY01032413
238910
Bacillota
CTT
Lys
>WENV180426047
OBVY01004285
238910
Bacillota
CTT
Lys
>WENV180426012
OBVY01003818
238910
Bacillota
CTT
Lys
>WENV180426044
OBVY01004271
97943
Bacillota
GTA
Tyr
>WENV180424954
OBVY01000011
338147
Bacillota
CTC
Glu
>WENV180424953
OBVY01000011
338147
Bacillota
CTC
Glu
>WENV180424952
OBVY01000011
338147
Bacillota
CTC
Glu
>WENV180426194
OBVY01009611
235150
Bacillota
TGC
Ala
>WENV180426265
OBVY01016045
114359
Bacillota
TAG
Leu
>WENV180426385
OBVY01041848
235294
Bacillota
TGC
Ala
>WENV180426231
OBVY01011627
340802
Bacillota
TTG
Gln
>WENV180425033
OBVY01000055
340802
Bacillota
TTG
Gln
>WENV180425022
OBVY01000053
340802
Bacillota
TTG
Gln
>WENV180426313
OBVY01021837
341763
Bacillota
CTC
Glu
>WENV180426282
OBVY01017658
144668
Bacillota
GTC
Asp
>WENV180425789
OBVY01001800
144668
Bacillota
GTC
Asp
>WENV180425779
OBVY01001744
182792
Bacillota
GTC
Asp
>WENV180425675
OBVY01001171
182792
Bacillota
GTC
Asp
>WENV180425584
OBVY01000833
182792
Bacillota
GTC
Asp
>WENV180425745
OBVY01001592
44859
Bacillota
AAG
Leu
>WENV180425900
OBVY01002623
16834
Bacillota
GCT
Ser
>WENV180426290
OBVY01017911
186380
Bacillota
GTC
Asp
>WENV180426287
OBVY01017911
186380
Bacillota
GTC
Asp
>WENV180426020
OBVY01003918
11034
Bacillota
GGA
Ser
>WENV180425935
OBVY01003094
235117
Bacillota
TAC
Val
>WENV180425674
OBVY01001171
235117
Bacillota
TAC
Val
>WENV180425964
OBVY01003345
156937
Bacillota
GTG
His
>WENV180425021
OBVY01000053
156937
Bacillota
GTG
His
>WENV180425878
OBVY01002426
338550
Bacillota
>WENV180425686
OBVY01001223
274189
Bacillota
TGT
Thr
>WENV180426300
OBVY01019683
37437
Bacillota
TAA
Leu
>WENV180425937
OBVY01003094
235079
Bacillota
GAA
Phe
>WENV180425831
OBVY01001981
235079
Bacillota
GAA
Phe
>WENV180425777
OBVY01001744
235079
Bacillota
GAA
Phe
>WENV180425676
OBVY01001171
235079
Bacillota
GAA
Phe
>WENV180426046
OBVY01004285
173314
Bacillota
GAT
Ile
>WENV180426179
OBVY01009046
243612
Bacillota
TAC
Val
>WENV180425096
OBVY01000105
149041
Bacillota
GTC
Asp
>WENV180425044
OBVY01000061
149041
Bacillota
GTC
Asp
>WENV180425363
OBVY01000355
338149
Bacillota
CTC
Glu
>WENV180425832
OBVY01001981
271471
Bacillota
GCC
Gly
>WENV180425223
OBVY01000192
271471
Bacillota
GCC
Gly
>WENV180424967
OBVY01000018
271471
Bacillota
GCC
Gly
>WENV180426371
OBVY01038476
144766
Bacillota
CAT
Met
>WENV180425701
OBVY01001297
245298
Bacillota
CGG
Pro
>WENV180426198
OBVY01009739
37269
Bacillota
TGA
Ser
>WENV180425862
OBVY01002246
37269
Bacillota
TGA
Ser
>WENV180425537
OBVY01000712
37269
Bacillota
TGA
Ser
>WENV180426030
OBVY01003998
155089
Bacillota
CAT
Met
>WENV180425865
OBVY01002283
169968
Bacillota
CAT
Met
>WENV180425757
OBVY01001668
169968
Bacillota
CAT
Met
>WENV180425107
OBVY01000106
169968
Bacillota
CAT
Met
>WENV180425235
OBVY01000205
173810
Bacillota
CAT
Met
>WENV180426153
OBVY01007424
28968
Bacillota
GGA
Ser
>WENV180425007
OBVY01000047
162445
Bacillota
CAT
Met
>WENV180425005
OBVY01000047
162445
Bacillota
CAT
Met
>WENV180425080
OBVY01000081
152492
Bacillota
GGG
Pro
>WENV180424985
OBVY01000032
152492
Bacillota
GGG
Pro
>WENV180426338
OBVY01029113
147135
Bacillota
ACG
Arg
>WENV180425482
OBVY01000553
100326
Bacillota
GTA
Tyr
>WENV180424989
OBVY01000035
100326
Bacillota
GTA
Tyr
>WENV180425256
OBVY01000221
144610
Bacillota
GTG
His
>WENV180425032
OBVY01000055
144610
Bacillota
GTG
His
>WENV180426177
OBVY01008454
353537
Bacillota
GTT
Asn
>WENV180424960
OBVY01000014
240017
Bacillota
GCC
Gly
>WENV180425700
OBVY01001297
411547
Bacillota
CTG
Gln
>WENV180425534
OBVY01000706
411547
Bacillota
CTG
Gln
>WENV180425089
OBVY01000096
147684
Bacillota
ACG
Arg
>WENV180425348
OBVY01000332
4624
Bacillota
GCT
Ser
>WENV180426289
OBVY01017911
263765
Bacillota
TAC
Val
>WENV180426286
OBVY01017911
263765
Bacillota
TAC
Val
>WENV180424964
OBVY01000018
263765
Bacillota
TAC
Val
>WENV180424957
OBVY01000014
263765
Bacillota
TAC
Val
>WENV180426193
OBVY01009564
342895
Bacillota
CAT
Met
>WENV180425694
OBVY01001248
18852
Bacillota
GCT
Ser
>WENV180426327
OBVY01025873
235095
Bacillota
GGT
Thr
>WENV180425585
OBVY01000833
235095
Bacillota
GGT
Thr
>WENV180425317
OBVY01000283
344183
Bacillota
CTG
Gln
>WENV180425098
OBVY01000105
239832
Bacillota
TGT
Thr
>WENV180425042
OBVY01000061
239832
Bacillota
TGT
Thr
>WENV180425903
OBVY01002667
185292
Bacillota
ACG
Arg
>WENV180426268
OBVY01016045
150597
Bacillota
TCT
Arg
>WENV180425020
OBVY01000053
152151
Bacillota
TCT
Arg
>WENV180425699
OBVY01001297
411549
Bacillota
TTG
Gln
>WENV180426050
OBVY01004285
245386
Bacillota
CCA
Trp
>WENV180425772
OBVY01001708
148188
Bacillota
CCG
Arg
>WENV180425577
OBVY01000808
148188
Bacillota
CCG
Arg
>WENV180425871
OBVY01002313
80612
Bacillota
GTA
Tyr
>WENV180425633
OBVY01000963
235127
Bacillota
TTT
Lys
>WENV180425620
OBVY01000940
235127
Bacillota
TTT
Lys
>WENV180426298
OBVY01019683
368876
Bacillota
GCC
Gly
>WENV180426316
OBVY01023009
243401
Bacillota
CGT
Thr
>WENV180426309
OBVY01021172
411739
Bacillota
TCC
Gly
>WENV180426267
OBVY01016045
411739
Bacillota
TCC
Gly
>WENV180426200
OBVY01009861
235638
Bacillota
GAA
Phe
>WENV180425498
OBVY01000577
235124
Bacillota
TGG
Pro
>WENV180426373
OBVY01038476
163753
Bacillota
TGG
Pro
>WENV180426264
OBVY01016045
237963
Bacillota
TTT
Lys
>WENV180426013
OBVY01003823
237963
Bacillota
TTT
Lys
>WENV180426107
OBVY01005689
338129
Bacillota
TGT
Thr
>WENV180426262
OBVY01016045
279635
Bacillota
GTG
His
>WENV180425858
OBVY01002220
243613
Bacillota
GTG
His
>WENV180426236
OBVY01011853
144583
Bacillota
ACG
Arg
>WENV180425558
OBVY01000759
144672
Bacillota
TCT
Arg
>WENV180425479
OBVY01000553
144652
Bacillota
GTC
Asp
>WENV180426196
OBVY01009637
247734
Bacillota
TGC
Ala
>WENV180426073
OBVY01004688
247734
Bacillota
TGC
Ala
>WENV180425583
OBVY01000833
235171
Bacillota
CCA
Trp
>WENV180425732
OBVY01001500
238974
Bacillota
GAA
Phe
>WENV180426293
OBVY01018276
144621
Bacillota
GTT
Asn
>WENV180425364
OBVY01000355
144621
Bacillota
GTT
Asn
>WENV180426288
OBVY01017911
353527
Bacillota
TTC
Glu
>WENV180426285
OBVY01017911
353527
Bacillota
TTC
Glu
>WENV180425649
OBVY01001017
58712
Bacillota
CAG
Leu
>WENV180425565
OBVY01000781
58712
Bacillota
CAG
Leu
>WENV180426428
OBVY01070634
144762
Bacillota
TCT
Arg
>WENV180425926
OBVY01003026
245296
Bacillota
CCC
Gly
>WENV180426339
OBVY01029156
272992
Bacillota
CTT
Lys
>WENV180426028
OBVY01003962
281472
Bacillota
GGT
Thr
>WENV180425031
OBVY01000055
157635
Bacillota
TCT
Arg
>WENV180425378
OBVY01000378
144594
Bacillota
CAC
Val
>WENV180426022
OBVY01003959
272488
Bacillota
GAA
Phe
>WENV180425866
OBVY01002283
272488
Bacillota
GAA
Phe
>WENV180425776
OBVY01001739
272488
Bacillota
GAA
Phe
>WENV180425768
OBVY01001696
272488
Bacillota
GAA
Phe
>WENV180425758
OBVY01001668
272488
Bacillota
GAA
Phe
>WENV180425619
OBVY01000940
272488
Bacillota
GAA
Phe
>WENV180425167
OBVY01000154
272488
Bacillota
GAA
Phe
>WENV180425108
OBVY01000106
272488
Bacillota
GAA
Phe
>WENV180425088
OBVY01000096
272488
Bacillota
GAA
Phe
>WENV180425504
OBVY01000618
238945
Bacillota
GCC
Gly
>WENV180425427
OBVY01000461
238945
Bacillota
GCC
Gly
>WENV180425425
OBVY01000461
238945
Bacillota
GCC
Gly
>WENV180425288
OBVY01000259
238945
Bacillota
GCC
Gly
>WENV180425287
OBVY01000259
238945
Bacillota
GCC
Gly
>WENV180425168
OBVY01000154
238945
Bacillota
GCC
Gly
>WENV180426058
OBVY01004420
249259
Bacillota
GCC
Gly
>WENV180425934
OBVY01003094
249259
Bacillota
GCC
Gly
>WENV180425780
OBVY01001744
249259
Bacillota
GCC
Gly
>WENV180425778
OBVY01001744
249259
Bacillota
GCC
Gly
>WENV180425677
OBVY01001171
249259
Bacillota
GCC
Gly
>WENV180425673
OBVY01001171
249259
Bacillota
GCC
Gly
>WENV180426090
OBVY01005194
273862
Bacillota
TGC
Ala
>WENV180426045
OBVY01004285
273862
Bacillota
TGC
Ala
>WENV180425859
OBVY01002220
343027
Bacillota
TTG
Gln
>WENV180426275
OBVY01017195
338131
Bacillota
GCC
Gly
>WENV180426037
OBVY01004187
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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