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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
168 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180528821
OCHJ01026534
155958
Bacillota
GAT
Ile
>WENV180529200
OCHJ01128502
155958
Bacillota
GAT
Ile
>WENV180528527
OCHJ01006696
158247
Bacillota
>WENV180528270
OCHJ01002374
144612
Bacillota
TCT
Arg
>WENV180527376
OCHJ01000090
154063
Bacillota
CGG
Pro
>WENV180527404
OCHJ01000107
267649
Bacillota
TAC
Val
>WENV180527773
OCHJ01000516
267649
Bacillota
TAC
Val
>WENV180528102
OCHJ01001375
235134
Bacillota
GAA
Phe
>WENV180529096
OCHJ01089358
235287
Bacillota
TTT
Lys
>WENV180528259
OCHJ01002361
267556
Bacillota
TAC
Val
>WENV180527970
OCHJ01000906
267556
Bacillota
TAC
Val
>WENV180527841
OCHJ01000647
267556
Bacillota
TAC
Val
>WENV180527607
OCHJ01000273
267556
Bacillota
TAC
Val
>WENV180527605
OCHJ01000273
267556
Bacillota
TAC
Val
>WENV180528930
OCHJ01044335
235098
Bacillota
GAC
Val
>WENV180528650
OCHJ01011683
235098
Bacillota
GAC
Val
>WENV180528128
OCHJ01001553
235098
Bacillota
GAC
Val
>WENV180528836
OCHJ01028099
338152
Bacillota
TTC
Glu
>WENV180528265
OCHJ01002364
148239
Bacillota
TCT
Arg
>WENV180528354
OCHJ01003404
44854
Bacillota
TGA
Ser
>WENV180529175
OCHJ01119760
356488
Bacillota
TGT
Thr
>WENV180529083
OCHJ01086267
235154
Bacillota
GTT
Asn
>WENV180528390
OCHJ01003773
235154
Bacillota
GTT
Asn
>WENV180528754
OCHJ01019326
16787
Bacillota
TGA
Ser
>WENV180529198
OCHJ01127946
144577
Bacillota
GAT
Ile
>WENV180527486
OCHJ01000167
37071
Bacillota
TGA
Ser
>WENV180528733
OCHJ01017116
59312
Bacillota
CAG
Leu
>WENV180528664
OCHJ01012322
59312
Bacillota
CAG
Leu
>WENV180528027
OCHJ01001097
59312
Bacillota
CAG
Leu
>WENV180527671
OCHJ01000347
59312
Bacillota
CAG
Leu
>WENV180529087
OCHJ01087446
162003
Bacillota
GTC
Asp
>WENV180527579
OCHJ01000241
238910
Bacillota
CTT
Lys
>WENV180528910
OCHJ01041399
97943
Bacillota
GTA
Tyr
>WENV180528324
OCHJ01002895
338147
Bacillota
CTC
Glu
>WENV180528291
OCHJ01002503
338147
Bacillota
CTC
Glu
>WENV180528071
OCHJ01001301
338147
Bacillota
CTC
Glu
>WENV180527342
OCHJ01000068
338147
Bacillota
CTC
Glu
>WENV180527341
OCHJ01000064
338147
Bacillota
CTC
Glu
>WENV180528919
OCHJ01042422
235150
Bacillota
TGC
Ala
>WENV180527437
OCHJ01000138
155273
Bacillota
CAT
Met
>WENV180528955
OCHJ01049665
235137
Bacillota
TGC
Ala
>WENV180528559
OCHJ01007672
235294
Bacillota
TGC
Ala
>WENV180527946
OCHJ01000854
340802
Bacillota
TTG
Gln
>WENV180528033
OCHJ01001126
235114
Bacillota
TTT
Lys
>WENV180527926
OCHJ01000824
235114
Bacillota
TTT
Lys
>WENV180528755
OCHJ01019326
18548
Bacillota
GCT
Ser
>WENV180529236
OCHJ01156988
144668
Bacillota
GTC
Asp
>WENV180529231
OCHJ01152523
235091
Bacillota
CTT
Lys
>WENV180528705
OCHJ01015462
44859
Bacillota
AAG
Leu
>WENV180527799
OCHJ01000578
44859
Bacillota
AAG
Leu
>WENV180527670
OCHJ01000347
44859
Bacillota
AAG
Leu
>WENV180528796
OCHJ01023242
11034
Bacillota
GGA
Ser
>WENV180528085
OCHJ01001350
235117
Bacillota
TAC
Val
>WENV180528923
OCHJ01043086
247057
Bacillota
TGC
Ala
>WENV180527945
OCHJ01000854
156937
Bacillota
GTG
His
>WENV180529095
OCHJ01089358
235290
Bacillota
TTG
Gln
>WENV180529294
OCHJ01220172
338550
Bacillota
>WENV180528087
OCHJ01001350
235079
Bacillota
GAA
Phe
>WENV180527198
OCHJ01000013
235079
Bacillota
GAA
Phe
>WENV180528571
OCHJ01008348
16266
Bacillota
GCT
Ser
>WENV180527809
OCHJ01000596
16266
Bacillota
GCT
Ser
>WENV180529197
OCHJ01127946
235087
Bacillota
TGC
Ala
>WENV180528913
OCHJ01041835
173314
Bacillota
GAT
Ile
>WENV180529151
OCHJ01110908
149041
Bacillota
GTC
Asp
>WENV180528828
OCHJ01027215
338149
Bacillota
CTC
Glu
>WENV180528636
OCHJ01011005
338149
Bacillota
CTC
Glu
>WENV180528123
OCHJ01001522
338149
Bacillota
CTC
Glu
>WENV180529076
OCHJ01083189
144766
Bacillota
CAT
Met
>WENV180528701
OCHJ01015122
245298
Bacillota
CGG
Pro
>WENV180528929
OCHJ01043533
258936
Bacillota
GGT
Thr
>WENV180527445
OCHJ01000141
169968
Bacillota
CAT
Met
>WENV180529060
OCHJ01078811
115075
Bacillota
TAG
Leu
>WENV180527251
OCHJ01000024
413152
Bacillota
TCC
Gly
>WENV180528735
OCHJ01017186
173810
Bacillota
CAT
Met
>WENV180528685
OCHJ01013719
152492
Bacillota
GGG
Pro
>WENV180529097
OCHJ01089358
411585
Bacillota
GCA
Cys
>WENV180527969
OCHJ01000906
144599
Bacillota
GTC
Asp
>WENV180529024
OCHJ01062640
144599
Bacillota
GTC
Asp
>WENV180528258
OCHJ01002361
144599
Bacillota
GTC
Asp
>WENV180527300
OCHJ01000040
235078
Bacillota
TAC
Val
>WENV180527196
OCHJ01000013
235078
Bacillota
TAC
Val
>WENV180528827
OCHJ01026987
153911
Bacillota
GAT
Ile
>WENV180528676
OCHJ01013283
153911
Bacillota
GAT
Ile
>WENV180527918
OCHJ01000822
100326
Bacillota
GTA
Tyr
>WENV180527761
OCHJ01000508
100326
Bacillota
GTA
Tyr
>WENV180527643
OCHJ01000312
100326
Bacillota
GTA
Tyr
>WENV180527554
OCHJ01000223
100326
Bacillota
GTA
Tyr
>WENV180529270
OCHJ01198226
144610
Bacillota
GTG
His
>WENV180528266
OCHJ01002364
144610
Bacillota
GTG
His
>WENV180528800
OCHJ01023459
353537
Bacillota
GTT
Asn
>WENV180528103
OCHJ01001375
240017
Bacillota
GCC
Gly
>WENV180527384
OCHJ01000098
240017
Bacillota
GCC
Gly
>WENV180528700
OCHJ01015122
411547
Bacillota
CTG
Gln
>WENV180528245
OCHJ01002310
411547
Bacillota
CTG
Gln
>WENV180527629
OCHJ01000292
147684
Bacillota
ACG
Arg
>WENV180528355
OCHJ01003404
4624
Bacillota
GCT
Ser
>WENV180528583
OCHJ01008717
263765
Bacillota
TAC
Val
>WENV180528139
OCHJ01001581
263765
Bacillota
TAC
Val
>WENV180528100
OCHJ01001375
263765
Bacillota
TAC
Val
>WENV180527383
OCHJ01000098
263765
Bacillota
TAC
Val
>WENV180529051
OCHJ01075533
411584
Bacillota
TCC
Gly
>WENV180529010
OCHJ01059168
411584
Bacillota
TCC
Gly
>WENV180528756
OCHJ01019423
235095
Bacillota
GGT
Thr
>WENV180528714
OCHJ01015894
235095
Bacillota
GGT
Thr
>WENV180528711
OCHJ01015894
235095
Bacillota
GGT
Thr
>WENV180528504
OCHJ01006380
344183
Bacillota
CTG
Gln
>WENV180529062
OCHJ01078811
150597
Bacillota
TCT
Arg
>WENV180529194
OCHJ01127442
235289
Bacillota
GTT
Asn
>WENV180528579
OCHJ01008591
411549
Bacillota
TTG
Gln
>WENV180528418
OCHJ01004073
411549
Bacillota
TTG
Gln
>WENV180528339
OCHJ01003146
235142
Bacillota
CTT
Lys
>WENV180527565
OCHJ01000234
235142
Bacillota
CTT
Lys
>WENV180527496
OCHJ01000174
235142
Bacillota
CTT
Lys
>WENV180529101
OCHJ01089581
245386
Bacillota
CCA
Trp
>WENV180528804
OCHJ01024069
148188
Bacillota
CCG
Arg
>WENV180528538
OCHJ01007113
148188
Bacillota
CCG
Arg
>WENV180528591
OCHJ01009054
80612
Bacillota
GTA
Tyr
>WENV180528362
OCHJ01003521
80612
Bacillota
GTA
Tyr
>WENV180527927
OCHJ01000828
80612
Bacillota
GTA
Tyr
>WENV180527796
OCHJ01000573
256380
Bacillota
>WENV180527509
OCHJ01000189
256380
Bacillota
>WENV180529077
OCHJ01083189
144764
Bacillota
CAT
Met
>WENV180528901
OCHJ01039565
163943
Bacillota
GTC
Asp
>WENV180528068
OCHJ01001289
163943
Bacillota
GTC
Asp
>WENV180527827
OCHJ01000625
163943
Bacillota
GTC
Asp
>WENV180529209
OCHJ01136509
145382
Bacillota
GTC
Asp
>WENV180529177
OCHJ01119760
113612
Bacillota
TAG
Leu
>WENV180529138
OCHJ01103846
235124
Bacillota
TGG
Pro
>WENV180528736
OCHJ01017186
235506
Bacillota
TGC
Ala
>WENV180528991
OCHJ01056257
345314
Bacillota
TTG
Gln
>WENV180529059
OCHJ01078811
237963
Bacillota
TTT
Lys
>WENV180529025
OCHJ01062640
254433
Bacillota
TAC
Val
>WENV180528609
OCHJ01009726
338129
Bacillota
TGT
Thr
>WENV180527793
OCHJ01000568
157838
Bacillota
GTC
Asp
>WENV180528780
OCHJ01020945
144583
Bacillota
ACG
Arg
>WENV180528196
OCHJ01001868
144583
Bacillota
ACG
Arg
>WENV180529309
OCHJ01223328
144652
Bacillota
GTC
Asp
>WENV180528842
OCHJ01029540
247734
Bacillota
TGC
Ala
>WENV180528712
OCHJ01015894
235171
Bacillota
CCA
Trp
>WENV180527989
OCHJ01000949
238974
Bacillota
GAA
Phe
>WENV180527920
OCHJ01000822
238974
Bacillota
GAA
Phe
>WENV180527763
OCHJ01000508
238974
Bacillota
GAA
Phe
>WENV180527645
OCHJ01000312
238974
Bacillota
GAA
Phe
>WENV180528637
OCHJ01011005
144621
Bacillota
GTT
Asn
>WENV180528557
OCHJ01007623
144621
Bacillota
GTT
Asn
>WENV180528124
OCHJ01001522
144621
Bacillota
GTT
Asn
>WENV180527925
OCHJ01000824
235113
Bacillota
GAA
Phe
>WENV180527483
OCHJ01000167
235113
Bacillota
GAA
Phe
>WENV180528739
OCHJ01017719
58712
Bacillota
CAG
Leu
>WENV180528663
OCHJ01012319
58712
Bacillota
CAG
Leu
>WENV180528499
OCHJ01006317
58712
Bacillota
CAG
Leu
>WENV180529302
OCHJ01220928
144762
Bacillota
TCT
Arg
>WENV180528582
OCHJ01008692
245296
Bacillota
CCC
Gly
>WENV180529303
OCHJ01221211
144594
Bacillota
CAC
Val
>WENV180528674
OCHJ01013064
144594
Bacillota
CAC
Val
>WENV180527923
OCHJ01000824
95563
Bacillota
GTA
Tyr
>WENV180527718
OCHJ01000429
95563
Bacillota
GTA
Tyr
>WENV180527226
OCHJ01000021
338127
Bacillota
TTG
Gln
>WENV180528109
OCHJ01001418
414486
Bacillota
CCC
Gly
>WENV180527932
OCHJ01000843
114075
Bacillota
TAG
Leu
>WENV180529040
OCHJ01068356
238945
Bacillota
GCC
Gly
>WENV180527386
OCHJ01000101
238945
Bacillota
GCC
Gly
>WENV180528767
OCHJ01020150
249259
Bacillota
GCC
Gly
>WENV180528088
OCHJ01001350
249259
Bacillota
GCC
Gly
>WENV180529009
OCHJ01059168
338207
Bacillota
TTC
Glu
>WENV180528251
OCHJ01002349
338128
Bacillota
TTC
Glu
>WENV180527929
OCHJ01000831
338128
Bacillota
TTC
Glu
>WENV180527625
OCHJ01000291
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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