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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180570717
OCLS01000439
236062
Deinococcota
CAT
Met
>WENV180570749
OCLS01000473
145521
Deinococcota
ACG
Arg
>WENV180570899
OCLS01001034
193270
Deinococcota
CCT
Arg
>WENV180570787
OCLS01000576
411772
Deinococcota
TCC
Gly
>WENV180570805
OCLS01000617
101650
Deinococcota
TAA
Leu
>WENV180570803
OCLS01000613
175973
Deinococcota
GTG
His
>WENV180570752
OCLS01000483
338650
Deinococcota
GTT
Asn
>WENV180570878
OCLS01000941
80682
Deinococcota
GTA
Tyr
>WENV180570748
OCLS01000473
7107
Deinococcota
GCT
Ser
>WENV180570793
OCLS01000582
120152
Deinococcota
CAA
Leu
>WENV180570804
OCLS01000613
85317
Deinococcota
TAG
Leu
>WENV180570754
OCLS01000490
95720
Deinococcota
CAG
Leu
>WENV180570616
OCLS01000310
145517
Deinococcota
GAT
Ile
>WENV180570814
OCLS01000655
27708
Deinococcota
GGA
Ser
>WENV180570716
OCLS01000439
151870
Deinococcota
TCT
Arg
>WENV180570691
OCLS01000416
236064
Deinococcota
GAA
Phe
>WENV180570768
OCLS01000530
360763
Deinococcota
TTT
Lys
>WENV180570681
OCLS01000393
27707
Deinococcota
CGA
Ser
>WENV180570794
OCLS01000586
411774
Deinococcota
GCA
Cys
>WENV180570675
OCLS01000378
150646
Deinococcota
CGG
Pro
>WENV180570750
OCLS01000473
145466
Deinococcota
GGG
Pro
>WENV180570728
OCLS01000460
236063
Deinococcota
GTC
Asp
>WENV180570690
OCLS01000416
236063
Deinococcota
GTC
Asp
>WENV180570718
OCLS01000439
338647
Deinococcota
CAC
Val
>WENV180570727
OCLS01000450
120153
Deinococcota
GAG
Leu
>WENV180570747
OCLS01000473
44946
Deinococcota
TGA
Ser
>WENV180570689
OCLS01000416
241600
Deinococcota
CTT
Lys
>WENV180570880
OCLS01000941
379727
Deinococcota
GGT
Thr
>WENV180570683
OCLS01000399
350519
Deinococcota
TGC
Ala
>WENV180570801
OCLS01000603
421723
Deinococcota
CTG
Gln
>WENV180570684
OCLS01000399
360765
Deinococcota
TAC
Val
>WENV180570879
OCLS01000941
265328
Deinococcota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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