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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180571276
OCLT01000033
236062
Deinococcota
CAT
Met
>WENV180571485
OCLT01000132
145521
Deinococcota
ACG
Arg
>WENV180571564
OCLT01000187
193270
Deinococcota
CCT
Arg
>WENV180571274
OCLT01000033
411772
Deinococcota
TCC
Gly
>WENV180571545
OCLT01000163
101650
Deinococcota
TAA
Leu
>WENV180571547
OCLT01000163
175973
Deinococcota
GTG
His
>WENV180571482
OCLT01000132
338650
Deinococcota
GTT
Asn
>WENV180571854
OCLT01000678
80682
Deinococcota
GTA
Tyr
>WENV180571484
OCLT01000132
7107
Deinococcota
GCT
Ser
>WENV180571496
OCLT01000137
120152
Deinococcota
CAA
Leu
>WENV180571548
OCLT01000163
85317
Deinococcota
TAG
Leu
>WENV180571481
OCLT01000132
95720
Deinococcota
CAG
Leu
>WENV180571546
OCLT01000163
145517
Deinococcota
GAT
Ile
>WENV180571788
OCLT01000500
27708
Deinococcota
GGA
Ser
>WENV180571279
OCLT01000033
151870
Deinococcota
TCT
Arg
>WENV180571610
OCLT01000235
236064
Deinococcota
GAA
Phe
>WENV180571400
OCLT01000081
360763
Deinococcota
TTT
Lys
>WENV180571283
OCLT01000033
27707
Deinococcota
CGA
Ser
>WENV180571281
OCLT01000033
411774
Deinococcota
GCA
Cys
>WENV180571391
OCLT01000075
150646
Deinococcota
CGG
Pro
>WENV180571486
OCLT01000132
145466
Deinococcota
GGG
Pro
>WENV180571609
OCLT01000235
236063
Deinococcota
GTC
Asp
>WENV180571565
OCLT01000187
236063
Deinococcota
GTC
Asp
>WENV180571277
OCLT01000033
338647
Deinococcota
CAC
Val
>WENV180571278
OCLT01000033
120153
Deinococcota
GAG
Leu
>WENV180571483
OCLT01000132
44946
Deinococcota
TGA
Ser
>WENV180571611
OCLT01000235
241600
Deinococcota
CTT
Lys
>WENV180571856
OCLT01000678
379727
Deinococcota
GGT
Thr
>WENV180571280
OCLT01000033
350519
Deinococcota
TGC
Ala
>WENV180571401
OCLT01000081
421723
Deinococcota
CTG
Gln
>WENV180571275
OCLT01000033
360765
Deinococcota
TAC
Val
>WENV180571855
OCLT01000678
265328
Deinococcota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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