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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180639588
OCRL01000035
236062
Deinococcota
CAT
Met
>WENV180639795
OCRL01000134
145521
Deinococcota
ACG
Arg
>WENV180639869
OCRL01000183
193270
Deinococcota
CCT
Arg
>WENV180639586
OCRL01000035
411772
Deinococcota
TCC
Gly
>WENV180639838
OCRL01000158
101650
Deinococcota
TAA
Leu
>WENV180639840
OCRL01000158
175973
Deinococcota
GTG
His
>WENV180639792
OCRL01000134
338650
Deinococcota
GTT
Asn
>WENV180640143
OCRL01000672
80682
Deinococcota
GTA
Tyr
>WENV180639794
OCRL01000134
7107
Deinococcota
GCT
Ser
>WENV180639804
OCRL01000139
120152
Deinococcota
CAA
Leu
>WENV180639841
OCRL01000158
85317
Deinococcota
TAG
Leu
>WENV180639791
OCRL01000134
95720
Deinococcota
CAG
Leu
>WENV180639839
OCRL01000158
145517
Deinococcota
GAT
Ile
>WENV180640086
OCRL01000494
27708
Deinococcota
GGA
Ser
>WENV180639591
OCRL01000035
151870
Deinococcota
TCT
Arg
>WENV180640033
OCRL01000348
236064
Deinococcota
GAA
Phe
>WENV180639727
OCRL01000087
360763
Deinococcota
TTT
Lys
>WENV180639595
OCRL01000035
27707
Deinococcota
CGA
Ser
>WENV180639593
OCRL01000035
411774
Deinococcota
GCA
Cys
>WENV180639705
OCRL01000076
150646
Deinococcota
CGG
Pro
>WENV180639796
OCRL01000134
145466
Deinococcota
GGG
Pro
>WENV180640032
OCRL01000348
236063
Deinococcota
GTC
Asp
>WENV180639870
OCRL01000183
236063
Deinococcota
GTC
Asp
>WENV180639589
OCRL01000035
338647
Deinococcota
CAC
Val
>WENV180639590
OCRL01000035
120153
Deinococcota
GAG
Leu
>WENV180639793
OCRL01000134
44946
Deinococcota
TGA
Ser
>WENV180640034
OCRL01000348
241600
Deinococcota
CTT
Lys
>WENV180640145
OCRL01000672
379727
Deinococcota
GGT
Thr
>WENV180639592
OCRL01000035
350519
Deinococcota
TGC
Ala
>WENV180639728
OCRL01000087
421723
Deinococcota
CTG
Gln
>WENV180639587
OCRL01000035
360765
Deinococcota
TAC
Val
>WENV180640144
OCRL01000672
265328
Deinococcota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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