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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
154 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181089679
OEBA01064134
196621
Bacillota
GTC
Asp
>WENV181089813
OEBA01107616
196621
Bacillota
GTC
Asp
>WENV181089052
OEBA01011070
309417
Bacillota
GGC
Ala
>WENV181089537
OEBA01042410
158247
Bacillota
>WENV181089037
OEBA01010552
37213
Bacillota
TGA
Ser
>WENV181089647
OEBA01058919
144612
Bacillota
TCT
Arg
>WENV181088867
OEBA01006393
390329
Bacillota
TTC
Glu
>WENV181089899
OEBA01144636
235134
Bacillota
GAA
Phe
>WENV181089782
OEBA01094184
235098
Bacillota
GAC
Val
>WENV181089435
OEBA01029076
235098
Bacillota
GAC
Val
>WENV181089410
OEBA01027138
235098
Bacillota
GAC
Val
>WENV181089284
OEBA01019411
235098
Bacillota
GAC
Val
>WENV181089593
OEBA01050712
338152
Bacillota
TTC
Glu
>WENV181089298
OEBA01019870
44854
Bacillota
TGA
Ser
>WENV181090095
OEBA01272865
235154
Bacillota
GTT
Asn
>WENV181089698
OEBA01070029
144577
Bacillota
GAT
Ile
>WENV181089528
OEBA01041002
144577
Bacillota
GAT
Ile
>WENV181089172
OEBA01015102
144577
Bacillota
GAT
Ile
>WENV181088824
OEBA01005780
37071
Bacillota
TGA
Ser
>WENV181089811
OEBA01107616
304022
Bacillota
GCC
Gly
>WENV181088873
OEBA01006513
429443
Bacillota
GCA
Cys
>WENV181088464
OEBA01001721
429443
Bacillota
GCA
Cys
>WENV181089627
OEBA01055670
246023
Bacillota
TGC
Ala
>WENV181088061
OEBA01000280
59312
Bacillota
CAG
Leu
>WENV181088005
OEBA01000183
59312
Bacillota
CAG
Leu
>WENV181089846
OEBA01118863
238910
Bacillota
CTT
Lys
>WENV181089710
OEBA01073221
238910
Bacillota
CTT
Lys
>WENV181089006
OEBA01009570
338147
Bacillota
CTC
Glu
>WENV181088534
OEBA01002164
338147
Bacillota
CTC
Glu
>WENV181088038
OEBA01000232
338147
Bacillota
CTC
Glu
>WENV181087995
OEBA01000164
338147
Bacillota
CTC
Glu
>WENV181087938
OEBA01000083
338147
Bacillota
CTC
Glu
>WENV181087851
OEBA01000017
338147
Bacillota
CTC
Glu
>WENV181089773
OEBA01090936
235150
Bacillota
TGC
Ala
>WENV181089529
OEBA01041248
235150
Bacillota
TGC
Ala
>WENV181089520
OEBA01039588
235150
Bacillota
TGC
Ala
>WENV181089465
OEBA01032229
235150
Bacillota
TGC
Ala
>WENV181088848
OEBA01006032
155273
Bacillota
CAT
Met
>WENV181089112
OEBA01012778
293599
Bacillota
CTT
Lys
>WENV181088326
OEBA01001064
293599
Bacillota
CTT
Lys
>WENV181088405
OEBA01001354
281701
Bacillota
TGC
Ala
>WENV181088224
OEBA01000643
235114
Bacillota
TTT
Lys
>WENV181089894
OEBA01143309
341763
Bacillota
CTC
Glu
>WENV181089201
OEBA01015951
388249
Bacillota
GCA
Cys
>WENV181089477
OEBA01033284
429429
Bacillota
CCA
Trp
>WENV181089079
OEBA01011835
429429
Bacillota
CCA
Trp
>WENV181088800
OEBA01005240
429429
Bacillota
CCA
Trp
>WENV181088393
OEBA01001292
429429
Bacillota
CCA
Trp
>WENV181088901
OEBA01006995
148104
Bacillota
CAT
Met
>WENV181090057
OEBA01268338
313454
Bacillota
GAA
Phe
>WENV181089986
OEBA01211197
313454
Bacillota
GAA
Phe
>WENV181089278
OEBA01019186
313454
Bacillota
GAA
Phe
>WENV181088773
OEBA01004921
313454
Bacillota
GAA
Phe
>WENV181089716
OEBA01074439
41154
Bacillota
TAA
Leu
>WENV181088004
OEBA01000183
44859
Bacillota
AAG
Leu
>WENV181089308
OEBA01020400
11034
Bacillota
GGA
Ser
>WENV181089812
OEBA01107616
235117
Bacillota
TAC
Val
>WENV181089024
OEBA01010188
156937
Bacillota
GTG
His
>WENV181088601
OEBA01002688
274189
Bacillota
TGT
Thr
>WENV181090062
OEBA01269735
235079
Bacillota
GAA
Phe
>WENV181089736
OEBA01080578
235079
Bacillota
GAA
Phe
>WENV181089312
OEBA01020537
235079
Bacillota
GAA
Phe
>WENV181089309
OEBA01020412
235079
Bacillota
GAA
Phe
>WENV181089527
OEBA01041002
235087
Bacillota
TGC
Ala
>WENV181089098
OEBA01012365
173314
Bacillota
GAT
Ile
>WENV181089751
OEBA01084128
338149
Bacillota
CTC
Glu
>WENV181089218
OEBA01016799
338149
Bacillota
CTC
Glu
>WENV181088433
OEBA01001502
271471
Bacillota
GCC
Gly
>WENV181088233
OEBA01000696
37269
Bacillota
TGA
Ser
>WENV181089168
OEBA01015042
155089
Bacillota
CAT
Met
>WENV181090039
OEBA01266688
169968
Bacillota
CAT
Met
>WENV181089840
OEBA01116680
413152
Bacillota
TCC
Gly
>WENV181089921
OEBA01160075
162445
Bacillota
CAT
Met
>WENV181089968
OEBA01194377
144599
Bacillota
GTC
Asp
>WENV181089472
OEBA01032525
153911
Bacillota
GAT
Ile
>WENV181089871
OEBA01131253
100326
Bacillota
GTA
Tyr
>WENV181089133
OEBA01013308
100326
Bacillota
GTA
Tyr
>WENV181088392
OEBA01001286
100326
Bacillota
GTA
Tyr
>WENV181088927
OEBA01007619
144610
Bacillota
GTG
His
>WENV181089550
OEBA01044134
240017
Bacillota
GCC
Gly
>WENV181088707
OEBA01004029
240017
Bacillota
GCC
Gly
>WENV181088187
OEBA01000528
240017
Bacillota
GCC
Gly
>WENV181089563
OEBA01045911
411547
Bacillota
CTG
Gln
>WENV181089532
OEBA01041901
411547
Bacillota
CTG
Gln
>WENV181089333
OEBA01021363
411547
Bacillota
CTG
Gln
>WENV181089030
OEBA01010323
411547
Bacillota
CTG
Gln
>WENV181089299
OEBA01019870
4624
Bacillota
GCT
Ser
>WENV181089897
OEBA01144636
263765
Bacillota
TAC
Val
>WENV181089334
OEBA01021573
263765
Bacillota
TAC
Val
>WENV181088430
OEBA01001502
263765
Bacillota
TAC
Val
>WENV181088186
OEBA01000528
263765
Bacillota
TAC
Val
>WENV181089873
OEBA01131445
412387
Bacillota
GCA
Cys
>WENV181089617
OEBA01054420
313104
Bacillota
TAC
Val
>WENV181090078
OEBA01272576
235095
Bacillota
GGT
Thr
>WENV181089630
OEBA01056362
235095
Bacillota
GGT
Thr
>WENV181088894
OEBA01006814
185292
Bacillota
ACG
Arg
>WENV181090063
OEBA01270394
411549
Bacillota
TTG
Gln
>WENV181088044
OEBA01000246
235142
Bacillota
CTT
Lys
>WENV181088040
OEBA01000241
235142
Bacillota
CTT
Lys
>WENV181089713
OEBA01073221
245386
Bacillota
CCA
Trp
>WENV181089780
OEBA01093388
59296
Bacillota
AAG
Leu
>WENV181089604
OEBA01052551
148188
Bacillota
CCG
Arg
>WENV181089416
OEBA01027761
148188
Bacillota
CCG
Arg
>WENV181088776
OEBA01004939
148188
Bacillota
CCG
Arg
>WENV181089469
OEBA01032316
80612
Bacillota
GTA
Tyr
>WENV181088761
OEBA01004688
256380
Bacillota
>WENV181088666
OEBA01003489
256380
Bacillota
>WENV181088618
OEBA01002863
256380
Bacillota
>WENV181089953
OEBA01184517
147674
Bacillota
TCT
Arg
>WENV181089574
OEBA01047660
235124
Bacillota
TGG
Pro
>WENV181089280
OEBA01019229
235124
Bacillota
TGG
Pro
>WENV181090085
OEBA01272657
338129
Bacillota
TGT
Thr
>WENV181089468
OEBA01032316
338129
Bacillota
TGT
Thr
>WENV181089277
OEBA01019186
157838
Bacillota
GTC
Asp
>WENV181088765
OEBA01004750
157838
Bacillota
GTC
Asp
>WENV181089815
OEBA01107952
144583
Bacillota
ACG
Arg
>WENV181089717
OEBA01074580
144583
Bacillota
ACG
Arg
>WENV181089380
OEBA01024312
144652
Bacillota
GTC
Asp
>WENV181088891
OEBA01006814
144652
Bacillota
GTC
Asp
>WENV181088218
OEBA01000643
144652
Bacillota
GTC
Asp
>WENV181089237
OEBA01017444
247734
Bacillota
TGC
Ala
>WENV181089748
OEBA01083037
419877
Bacillota
TCC
Gly
>WENV181089705
OEBA01072322
235171
Bacillota
CCA
Trp
>WENV181089853
OEBA01122495
238974
Bacillota
GAA
Phe
>WENV181088834
OEBA01005843
238974
Bacillota
GAA
Phe
>WENV181088594
OEBA01002667
238974
Bacillota
GAA
Phe
>WENV181089219
OEBA01016799
144621
Bacillota
GTT
Asn
>WENV181088622
OEBA01002932
144621
Bacillota
GTT
Asn
>WENV181088223
OEBA01000643
235113
Bacillota
GAA
Phe
>WENV181087996
OEBA01000164
235113
Bacillota
GAA
Phe
>WENV181088842
OEBA01005866
243098
Bacillota
GGT
Thr
>WENV181090051
OEBA01267856
58712
Bacillota
CAG
Leu
>WENV181089542
OEBA01042750
58712
Bacillota
CAG
Leu
>WENV181088520
OEBA01002110
157719
Bacillota
CAT
Met
>WENV181089127
OEBA01013257
245296
Bacillota
CCC
Gly
>WENV181090069
OEBA01272243
272992
Bacillota
CTT
Lys
>WENV181089769
OEBA01089393
272992
Bacillota
CTT
Lys
>WENV181089586
OEBA01050057
272992
Bacillota
CTT
Lys
>WENV181089433
OEBA01028945
344240
Bacillota
GCC
Gly
>WENV181089408
OEBA01027129
190106
Bacillota
TGG
Pro
>WENV181089432
OEBA01028945
196632
Bacillota
GTC
Asp
>WENV181089777
OEBA01092067
144594
Bacillota
CAC
Val
>WENV181089300
OEBA01019954
144594
Bacillota
CAC
Val
>WENV181089279
OEBA01019195
144594
Bacillota
CAC
Val
>WENV181088221
OEBA01000643
95563
Bacillota
GTA
Tyr
>WENV181087994
OEBA01000164
95563
Bacillota
GTA
Tyr
>WENV181089158
OEBA01014618
414486
Bacillota
CCC
Gly
>WENV181090083
OEBA01272632
272488
Bacillota
GAA
Phe
>WENV181088019
OEBA01000211
272488
Bacillota
GAA
Phe
>WENV181089216
OEBA01016704
114075
Bacillota
TAG
Leu
>WENV181089157
OEBA01014608
114075
Bacillota
TAG
Leu
>WENV181090036
OEBA01266248
292012
Bacillota
TGC
Ala
>WENV181089602
OEBA01051969
292012
Bacillota
TGC
Ala
>WENV181089681
OEBA01064505
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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