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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170708195
LNAP01057425
273688
Betaproteobacteria
GAT
Ile
>WENV170708426
LNAP01080416
273688
Betaproteobacteria
GAT
Ile
>WENV170708433
LNAP01081327
273688
Betaproteobacteria
GAT
Ile
>WENV170708468
LNAP01085326
273688
Betaproteobacteria
GAT
Ile
>WENV170708474
LNAP01085586
273688
Betaproteobacteria
GAT
Ile
>WENV170707779
LNAP01033657
112334
Betaproteobacteria
CAG
Leu
>WENV170707222
LNAP01015508
271893
Betaproteobacteria
GGG
Pro
>WENV170705803
LNAP01000352
452596
Betaproteobacteria
GTT
Asn
>WENV170705807
LNAP01000370
452596
Betaproteobacteria
GTT
Asn
>WENV170708172
LNAP01055355
272932
Betaproteobacteria
GAC
Val
>WENV170707863
LNAP01037215
458772
Betaproteobacteria
GCC
Gly
>WENV170706281
LNAP01001833
454453
Betaproteobacteria
GCC
Gly
>WENV170706398
LNAP01002822
454453
Betaproteobacteria
GCC
Gly
>WENV170708679
LNAP01101758
454453
Betaproteobacteria
GCC
Gly
>WENV170708283
LNAP01065316
286012
Betaproteobacteria
CAT
Met
>WENV170707579
LNAP01026199
286012
Betaproteobacteria
CAT
Met
>WENV170705869
LNAP01000536
655629
Betaproteobacteria
CAC
Val
>WENV170706795
LNAP01006792
273484
Betaproteobacteria
TTG
Gln
>WENV170705660
LNAP01000084
180273
Betaproteobacteria
TAG
Leu
>WENV170706215
LNAP01001711
180273
Betaproteobacteria
TAG
Leu
>WENV170706258
LNAP01001801
180273
Betaproteobacteria
TAG
Leu
>WENV170706629
LNAP01004871
180273
Betaproteobacteria
TAG
Leu
>WENV170706987
LNAP01010420
180273
Betaproteobacteria
TAG
Leu
>WENV170707613
LNAP01027325
180273
Betaproteobacteria
TAG
Leu
>WENV170707831
LNAP01035763
180273
Betaproteobacteria
TAG
Leu
>WENV170708220
LNAP01060132
180273
Betaproteobacteria
TAG
Leu
>WENV170706884
LNAP01008260
454456
Betaproteobacteria
CTT
Lys
>WENV170708620
LNAP01099765
454456
Betaproteobacteria
CTT
Lys
>WENV170705661
LNAP01000084
273693
Betaproteobacteria
GAC
Val
>WENV170706397
LNAP01002822
780579
Betaproteobacteria
GCA
Cys
>WENV170707224
LNAP01015560
274718
Betaproteobacteria
GGG
Pro
>WENV170708010
LNAP01043960
457359
Betaproteobacteria
TTT
Lys
>WENV170707793
LNAP01034304
457359
Betaproteobacteria
TTT
Lys
>WENV170707576
LNAP01025926
457359
Betaproteobacteria
TTT
Lys
>WENV170707396
LNAP01019356
457359
Betaproteobacteria
TTT
Lys
>WENV170707278
LNAP01016620
457359
Betaproteobacteria
TTT
Lys
>WENV170707111
LNAP01012882
457359
Betaproteobacteria
TTT
Lys
>WENV170706346
LNAP01002279
457359
Betaproteobacteria
TTT
Lys
>WENV170706834
LNAP01007403
457359
Betaproteobacteria
TTT
Lys
>WENV170707028
LNAP01011136
457359
Betaproteobacteria
TTT
Lys
>WENV170707601
LNAP01026831
282077
Betaproteobacteria
TTG
Gln
>WENV170707716
LNAP01030945
465310
Betaproteobacteria
TGC
Ala
>WENV170708462
LNAP01084187
179980
Betaproteobacteria
GTA
Tyr
>WENV170707808
LNAP01034835
180380
Betaproteobacteria
CAG
Leu
>WENV170708245
LNAP01062361
180380
Betaproteobacteria
CAG
Leu
>WENV170708246
LNAP01062361
180380
Betaproteobacteria
CAG
Leu
>WENV170708320
LNAP01069524
180380
Betaproteobacteria
CAG
Leu
>WENV170705938
LNAP01000696
46122
Betaproteobacteria
CGA
Ser
>WENV170706377
LNAP01002625
274186
Betaproteobacteria
TTG
Gln
>WENV170706495
LNAP01003579
274186
Betaproteobacteria
TTG
Gln
>WENV170706858
LNAP01007616
454348
Betaproteobacteria
GAA
Phe
>WENV170706351
LNAP01002327
655109
Betaproteobacteria
CAC
Val
>WENV170707660
LNAP01028784
655109
Betaproteobacteria
CAC
Val
>WENV170708322
LNAP01069778
655109
Betaproteobacteria
CAC
Val
>WENV170706192
LNAP01001618
180151
Betaproteobacteria
GAG
Leu
>WENV170706339
LNAP01002248
180151
Betaproteobacteria
GAG
Leu
>WENV170706655
LNAP01005245
180151
Betaproteobacteria
GAG
Leu
>WENV170706838
LNAP01007464
180151
Betaproteobacteria
GAG
Leu
>WENV170707512
LNAP01023508
180151
Betaproteobacteria
GAG
Leu
>WENV170708090
LNAP01049337
180151
Betaproteobacteria
GAG
Leu
>WENV170707213
LNAP01015242
454252
Betaproteobacteria
CGC
Ala
>WENV170707971
LNAP01042263
456398
Betaproteobacteria
GAA
Phe
>WENV170706916
LNAP01008948
276280
Betaproteobacteria
CAT
Met
>WENV170705693
LNAP01000132
458878
Betaproteobacteria
TTC
Glu
>WENV170706624
LNAP01004820
780146
Betaproteobacteria
CCC
Gly
>WENV170707547
LNAP01025060
780146
Betaproteobacteria
CCC
Gly
>WENV170707669
LNAP01028943
780146
Betaproteobacteria
CCC
Gly
>WENV170708068
LNAP01047709
780146
Betaproteobacteria
CCC
Gly
>WENV170708319
LNAP01069416
780146
Betaproteobacteria
CCC
Gly
>WENV170707113
LNAP01012902
180403
Betaproteobacteria
GAG
Leu
>WENV170705844
LNAP01000471
455193
Betaproteobacteria
GTT
Asn
>WENV170707033
LNAP01011242
455193
Betaproteobacteria
GTT
Asn
>WENV170707106
LNAP01012782
455193
Betaproteobacteria
GTT
Asn
>WENV170707239
LNAP01015859
455193
Betaproteobacteria
GTT
Asn
>WENV170707621
LNAP01027646
455193
Betaproteobacteria
GTT
Asn
>WENV170708272
LNAP01064788
455193
Betaproteobacteria
GTT
Asn
>WENV170706739
LNAP01006019
506081
Betaproteobacteria
TAC
Val
>WENV170707790
LNAP01034252
180463
Betaproteobacteria
CAG
Leu
>WENV170708211
LNAP01059084
180463
Betaproteobacteria
CAG
Leu
>WENV170706419
LNAP01003043
457105
Betaproteobacteria
TAC
Val
>WENV170706505
LNAP01003684
457105
Betaproteobacteria
TAC
Val
>WENV170706927
LNAP01009090
457105
Betaproteobacteria
TAC
Val
>WENV170708408
LNAP01079028
780079
Betaproteobacteria
TCC
Gly
>WENV170707877
LNAP01037585
45973
Betaproteobacteria
CGA
Ser
>WENV170707960
LNAP01041811
45973
Betaproteobacteria
CGA
Ser
>WENV170708579
LNAP01098942
45973
Betaproteobacteria
CGA
Ser
>WENV170705933
LNAP01000675
780738
Betaproteobacteria
GCA
Cys
>WENV170706898
LNAP01008542
487621
Betaproteobacteria
GCC
Gly
>WENV170707225
LNAP01015566
487621
Betaproteobacteria
GCC
Gly
>WENV170707558
LNAP01025364
487621
Betaproteobacteria
GCC
Gly
>WENV170708438
LNAP01082209
487621
Betaproteobacteria
GCC
Gly
>WENV170708263
LNAP01064174
471312
Betaproteobacteria
TGC
Ala
>WENV170705767
LNAP01000241
273686
Betaproteobacteria
TTG
Gln
>WENV170706672
LNAP01005379
273686
Betaproteobacteria
TTG
Gln
>WENV170708289
LNAP01066107
273686
Betaproteobacteria
TTG
Gln
>WENV170707589
LNAP01026284
655036
Betaproteobacteria
CCT
Arg
>WENV170708384
LNAP01076034
655036
Betaproteobacteria
CCT
Arg
>WENV170707065
LNAP01012098
470060
Betaproteobacteria
TGT
Thr
>WENV170706930
LNAP01009134
452595
Betaproteobacteria
GTT
Asn
>WENV170707158
LNAP01013977
452595
Betaproteobacteria
GTT
Asn
>WENV170708132
LNAP01051781
452595
Betaproteobacteria
GTT
Asn
>WENV170708400
LNAP01078190
452595
Betaproteobacteria
GTT
Asn
>WENV170708665
LNAP01101418
452595
Betaproteobacteria
GTT
Asn
>WENV170706363
LNAP01002423
487572
Betaproteobacteria
CCG
Arg
>WENV170706582
LNAP01004408
487572
Betaproteobacteria
CCG
Arg
>WENV170708599
LNAP01099188
487572
Betaproteobacteria
CCG
Arg
>WENV170705764
LNAP01000234
273481
Betaproteobacteria
GGG
Pro
>WENV170706988
LNAP01010436
273481
Betaproteobacteria
GGG
Pro
>WENV170707226
LNAP01015577
273481
Betaproteobacteria
GGG
Pro
>WENV170708080
LNAP01048769
273481
Betaproteobacteria
GGG
Pro
>WENV170708539
LNAP01093534
273481
Betaproteobacteria
GGG
Pro
>WENV170706742
LNAP01006033
319162
Betaproteobacteria
ACG
Arg
>WENV170706743
LNAP01006033
319162
Betaproteobacteria
ACG
Arg
>WENV170706744
LNAP01006033
319162
Betaproteobacteria
ACG
Arg
>WENV170708014
LNAP01044061
319162
Betaproteobacteria
ACG
Arg
>WENV170707134
LNAP01013568
276755
Betaproteobacteria
TCT
Arg
>WENV170707272
LNAP01016464
276755
Betaproteobacteria
TCT
Arg
>WENV170707315
LNAP01017252
276755
Betaproteobacteria
TCT
Arg
>WENV170707526
LNAP01023789
276755
Betaproteobacteria
TCT
Arg
>WENV170706501
LNAP01003633
30491
Betaproteobacteria
GGA
Ser
>WENV170708460
LNAP01084001
30491
Betaproteobacteria
GGA
Ser
>WENV170706973
LNAP01010123
89670
Betaproteobacteria
TGA
Ser
>WENV170707041
LNAP01011321
89670
Betaproteobacteria
TGA
Ser
>WENV170708013
LNAP01044055
89670
Betaproteobacteria
TGA
Ser
>WENV170706729
LNAP01005910
274850
Betaproteobacteria
CGG
Pro
>WENV170707093
LNAP01012444
454455
Betaproteobacteria
CCG
Arg
>WENV170707326
LNAP01017488
456400
Betaproteobacteria
TTC
Glu
>WENV170708680
LNAP01101775
456400
Betaproteobacteria
TTC
Glu
>WENV170707647
LNAP01028323
273483
Betaproteobacteria
ACG
Arg
>WENV170708690
LNAP01102170
273483
Betaproteobacteria
ACG
Arg
>WENV170707957
LNAP01041664
780144
Betaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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