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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170685462
LFRM01092749
23966
Gammaproteobacteria
CGA
Ser
>WENV170687854
LFRM01213861
179284
Gammaproteobacteria
CAT
Met
>WENV170684284
LFRM01030485
73068
Gammaproteobacteria
CAA
Leu
>WENV170685978
LFRM01118913
73068
Gammaproteobacteria
CAA
Leu
>WENV170687675
LFRM01204984
73068
Gammaproteobacteria
CAA
Leu
>WENV170688373
LFRM01242042
73068
Gammaproteobacteria
CAA
Leu
>WENV170691518
LFRM01400862
73068
Gammaproteobacteria
CAA
Leu
>WENV170686634
LFRM01156502
341033
Gammaproteobacteria
GTT
Asn
>WENV170687182
LFRM01181332
341033
Gammaproteobacteria
GTT
Asn
>WENV170691411
LFRM01396409
341033
Gammaproteobacteria
GTT
Asn
>WENV170685066
LFRM01071406
176243
Gammaproteobacteria
CCG
Arg
>WENV170688740
LFRM01260037
176520
Gammaproteobacteria
CAT
Met
>WENV170691177
LFRM01383493
284693
Gammaproteobacteria
TTC
Glu
>WENV170689915
LFRM01317664
481287
Gammaproteobacteria
GCA
Cys
>WENV170689496
LFRM01297151
229289
Gammaproteobacteria
TGG
Pro
>WENV170685938
LFRM01116650
280882
Gammaproteobacteria
GTG
His
>WENV170685640
LFRM01102668
282550
Gammaproteobacteria
TAC
Val
>WENV170686974
LFRM01171098
176627
Gammaproteobacteria
CCG
Arg
>WENV170688959
LFRM01270087
176627
Gammaproteobacteria
CCG
Arg
>WENV170691065
LFRM01378376
280912
Gammaproteobacteria
TGC
Ala
>WENV170689309
LFRM01288383
280912
Gammaproteobacteria
TGC
Ala
>WENV170689929
LFRM01318292
176214
Gammaproteobacteria
ACG
Arg
>WENV170690421
LFRM01340838
176790
Gammaproteobacteria
ACG
Arg
>WENV170684076
LFRM01018391
99884
Gammaproteobacteria
GAG
Leu
>WENV170686709
LFRM01159902
99884
Gammaproteobacteria
GAG
Leu
>WENV170687776
LFRM01210794
178229
Gammaproteobacteria
CAT
Met
>WENV170688399
LFRM01242971
443066
Gammaproteobacteria
GGT
Thr
>WENV170688163
LFRM01231417
281436
Gammaproteobacteria
TGC
Ala
>WENV170684556
LFRM01045695
20244
Gammaproteobacteria
GCT
Ser
>WENV170686830
LFRM01165563
20244
Gammaproteobacteria
GCT
Ser
>WENV170688181
LFRM01232449
280876
Gammaproteobacteria
GGT
Thr
>WENV170690420
LFRM01340838
30083
Gammaproteobacteria
GCT
Ser
>WENV170690189
LFRM01328915
299462
Gammaproteobacteria
TTC
Glu
>WENV170690999
LFRM01374754
299462
Gammaproteobacteria
TTC
Glu
>WENV170685744
LFRM01107126
299462
Gammaproteobacteria
TTC
Glu
>WENV170690936
LFRM01371863
303413
Gammaproteobacteria
GGT
Thr
>WENV170684960
LFRM01065834
303413
Gammaproteobacteria
GGT
Thr
>WENV170685720
LFRM01105582
303413
Gammaproteobacteria
GGT
Thr
>WENV170688162
LFRM01231417
176794
Gammaproteobacteria
GAT
Ile
>WENV170690307
LFRM01335005
284126
Gammaproteobacteria
>WENV170686831
LFRM01165563
205770
Gammaproteobacteria
ACG
Arg
>WENV170686832
LFRM01165563
205770
Gammaproteobacteria
ACG
Arg
>WENV170687638
LFRM01202972
205770
Gammaproteobacteria
ACG
Arg
>WENV170687916
LFRM01217206
205770
Gammaproteobacteria
ACG
Arg
>WENV170687917
LFRM01217206
205770
Gammaproteobacteria
ACG
Arg
>WENV170686807
LFRM01164417
334421
Gammaproteobacteria
TGT
Thr
>WENV170685337
LFRM01085290
334421
Gammaproteobacteria
TGT
Thr
>WENV170684470
LFRM01041026
293662
Gammaproteobacteria
GGT
Thr
>WENV170686586
LFRM01152969
236619
Gammaproteobacteria
GTC
Asp
>WENV170686584
LFRM01152969
236619
Gammaproteobacteria
GTC
Asp
>WENV170685829
LFRM01110889
342263
Gammaproteobacteria
TTT
Lys
>WENV170686603
LFRM01153888
342263
Gammaproteobacteria
TTT
Lys
>WENV170684651
LFRM01050986
481314
Gammaproteobacteria
GCA
Cys
>WENV170684873
LFRM01062457
481314
Gammaproteobacteria
GCA
Cys
>WENV170685053
LFRM01071069
481314
Gammaproteobacteria
GCA
Cys
>WENV170686185
LFRM01130443
481314
Gammaproteobacteria
GCA
Cys
>WENV170688398
LFRM01242971
402011
Gammaproteobacteria
TCC
Gly
>WENV170687877
LFRM01214774
315775
Gammaproteobacteria
TGT
Thr
>WENV170691408
LFRM01396145
56110
Gammaproteobacteria
TGA
Ser
>WENV170685342
LFRM01085719
56110
Gammaproteobacteria
TGA
Ser
>WENV170688273
LFRM01237019
56110
Gammaproteobacteria
TGA
Ser
>WENV170685929
LFRM01116352
176256
Gammaproteobacteria
GAT
Ile
>WENV170689308
LFRM01288383
176256
Gammaproteobacteria
GAT
Ile
>WENV170690157
LFRM01327619
176256
Gammaproteobacteria
GAT
Ile
>WENV170686383
LFRM01141117
399065
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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