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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
279 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183612973
OODU01001332
24650
Bacillota
TAA
Leu
>WENV183614027
OODU01021657
24650
Bacillota
TAA
Leu
>WENV183613578
OODU01006662
37213
Bacillota
TGA
Ser
>WENV183613630
OODU01007431
37213
Bacillota
TGA
Ser
>WENV183612642
OODU01000421
144612
Bacillota
TCT
Arg
>WENV183612782
OODU01000668
144612
Bacillota
TCT
Arg
>WENV183612831
OODU01000766
144612
Bacillota
TCT
Arg
>WENV183612912
OODU01001055
144612
Bacillota
TCT
Arg
>WENV183613559
OODU01006184
154063
Bacillota
CGG
Pro
>WENV183614034
OODU01021894
154063
Bacillota
CGG
Pro
>WENV183614174
OODU01031333
154063
Bacillota
CGG
Pro
>WENV183614508
OODU01106245
154063
Bacillota
CGG
Pro
>WENV183612345
OODU01000038
267649
Bacillota
TAC
Val
>WENV183613051
OODU01001700
267649
Bacillota
TAC
Val
>WENV183613223
OODU01002517
267649
Bacillota
TAC
Val
>WENV183613661
OODU01008181
267649
Bacillota
TAC
Val
>WENV183613757
OODU01010928
267649
Bacillota
TAC
Val
>WENV183612798
OODU01000708
235134
Bacillota
GAA
Phe
>WENV183613314
OODU01003218
235134
Bacillota
GAA
Phe
>WENV183613983
OODU01019380
235287
Bacillota
TTT
Lys
>WENV183613976
OODU01019380
235287
Bacillota
TTT
Lys
>WENV183614278
OODU01042609
267556
Bacillota
TAC
Val
>WENV183614208
OODU01033635
267556
Bacillota
TAC
Val
>WENV183614207
OODU01033634
267556
Bacillota
TAC
Val
>WENV183614051
OODU01023057
267556
Bacillota
TAC
Val
>WENV183613842
OODU01013843
267556
Bacillota
TAC
Val
>WENV183613811
OODU01012535
267556
Bacillota
TAC
Val
>WENV183613655
OODU01008041
267556
Bacillota
TAC
Val
>WENV183613859
OODU01014627
339890
Bacillota
TTG
Gln
>WENV183614263
OODU01041106
235098
Bacillota
GAC
Val
>WENV183614127
OODU01027723
235098
Bacillota
GAC
Val
>WENV183613767
OODU01011254
235098
Bacillota
GAC
Val
>WENV183613280
OODU01002977
235098
Bacillota
GAC
Val
>WENV183613034
OODU01001584
235098
Bacillota
GAC
Val
>WENV183614186
OODU01032879
338152
Bacillota
TTC
Glu
>WENV183613891
OODU01015868
338152
Bacillota
TTC
Glu
>WENV183613152
OODU01002076
338152
Bacillota
TTC
Glu
>WENV183612516
OODU01000236
338152
Bacillota
TTC
Glu
>WENV183612513
OODU01000236
338152
Bacillota
TTC
Glu
>WENV183613830
OODU01013536
340263
Bacillota
TTC
Glu
>WENV183613318
OODU01003240
340263
Bacillota
TTC
Glu
>WENV183613237
OODU01002596
23769
Bacillota
TAA
Leu
>WENV183614357
OODU01054017
250201
Bacillota
TGC
Ala
>WENV183614118
OODU01026942
338544
Bacillota
TGT
Thr
>WENV183614103
OODU01026159
338544
Bacillota
TGT
Thr
>WENV183614100
OODU01026159
338544
Bacillota
TGT
Thr
>WENV183614339
OODU01050231
148239
Bacillota
TCT
Arg
>WENV183612866
OODU01000879
148239
Bacillota
TCT
Arg
>WENV183612915
OODU01001062
44854
Bacillota
TGA
Ser
>WENV183612704
OODU01000509
44854
Bacillota
TGA
Ser
>WENV183612489
OODU01000176
44854
Bacillota
TGA
Ser
>WENV183613970
OODU01019380
356488
Bacillota
TGT
Thr
>WENV183614180
OODU01031834
235154
Bacillota
GTT
Asn
>WENV183613489
OODU01005269
235154
Bacillota
GTT
Asn
>WENV183612454
OODU01000136
235154
Bacillota
GTT
Asn
>WENV183612764
OODU01000640
148348
Bacillota
GTC
Asp
>WENV183614441
OODU01073087
246023
Bacillota
TGC
Ala
>WENV183612883
OODU01000942
59312
Bacillota
CAG
Leu
>WENV183613261
OODU01002777
239080
Bacillota
CTG
Gln
>WENV183612720
OODU01000529
238910
Bacillota
CTT
Lys
>WENV183614104
OODU01026159
97943
Bacillota
GTA
Tyr
>WENV183614264
OODU01041140
235150
Bacillota
TGC
Ala
>WENV183613999
OODU01020401
235150
Bacillota
TGC
Ala
>WENV183613905
OODU01016485
235137
Bacillota
TGC
Ala
>WENV183613766
OODU01011172
235294
Bacillota
TGC
Ala
>WENV183613973
OODU01019380
338208
Bacillota
>WENV183614120
OODU01027433
340802
Bacillota
TTG
Gln
>WENV183613777
OODU01011439
340802
Bacillota
TTG
Gln
>WENV183613300
OODU01003159
340802
Bacillota
TTG
Gln
>WENV183612532
OODU01000262
338143
Bacillota
CTC
Glu
>WENV183614384
OODU01058329
144668
Bacillota
GTC
Asp
>WENV183613756
OODU01010928
144668
Bacillota
GTC
Asp
>WENV183613596
OODU01006834
144668
Bacillota
GTC
Asp
>WENV183613474
OODU01004770
182792
Bacillota
GTC
Asp
>WENV183614245
OODU01038507
44859
Bacillota
AAG
Leu
>WENV183614099
OODU01026159
186380
Bacillota
GTC
Asp
>WENV183613143
OODU01002049
11034
Bacillota
GGA
Ser
>WENV183613107
OODU01001872
11034
Bacillota
GGA
Ser
>WENV183612990
OODU01001394
11034
Bacillota
GGA
Ser
>WENV183614128
OODU01027816
235117
Bacillota
TAC
Val
>WENV183612679
OODU01000487
235117
Bacillota
TAC
Val
>WENV183612765
OODU01000640
239076
Bacillota
GAA
Phe
>WENV183612678
OODU01000487
338440
Bacillota
TTC
Glu
>WENV183613407
OODU01004135
156937
Bacillota
GTG
His
>WENV183612945
OODU01001224
156937
Bacillota
GTG
His
>WENV183613975
OODU01019380
235290
Bacillota
TTG
Gln
>WENV183613119
OODU01001947
235079
Bacillota
GAA
Phe
>WENV183613481
OODU01004917
340265
Bacillota
GCC
Gly
>WENV183613480
OODU01004917
340265
Bacillota
GCC
Gly
>WENV183613290
OODU01003086
340265
Bacillota
GCC
Gly
>WENV183613981
OODU01019380
144763
Bacillota
TGG
Pro
>WENV183613899
OODU01016126
16266
Bacillota
GCT
Ser
>WENV183613866
OODU01015048
173314
Bacillota
GAT
Ile
>WENV183613302
OODU01003163
149041
Bacillota
GTC
Asp
>WENV183613678
OODU01008575
338149
Bacillota
CTC
Glu
>WENV183613581
OODU01006684
338149
Bacillota
CTC
Glu
>WENV183613163
OODU01002125
338149
Bacillota
CTC
Glu
>WENV183613979
OODU01019380
144766
Bacillota
CAT
Met
>WENV183613713
OODU01009485
245298
Bacillota
CGG
Pro
>WENV183613179
OODU01002223
245298
Bacillota
CGG
Pro
>WENV183612440
OODU01000121
245298
Bacillota
CGG
Pro
>WENV183613500
OODU01005427
37269
Bacillota
TGA
Ser
>WENV183613259
OODU01002760
37269
Bacillota
TGA
Ser
>WENV183612987
OODU01001378
37269
Bacillota
TGA
Ser
>WENV183612649
OODU01000426
37269
Bacillota
TGA
Ser
>WENV183614162
OODU01030622
155089
Bacillota
CAT
Met
>WENV183614011
OODU01021327
155089
Bacillota
CAT
Met
>WENV183613843
OODU01013843
155089
Bacillota
CAT
Met
>WENV183613813
OODU01012570
258936
Bacillota
GGT
Thr
>WENV183614279
OODU01042609
162445
Bacillota
CAT
Met
>WENV183614056
OODU01023604
162445
Bacillota
CAT
Met
>WENV183613916
OODU01016962
162445
Bacillota
CAT
Met
>WENV183614390
OODU01059753
152492
Bacillota
GGG
Pro
>WENV183614012
OODU01021431
152492
Bacillota
GGG
Pro
>WENV183613840
OODU01013687
152492
Bacillota
GGG
Pro
>WENV183612395
OODU01000072
152492
Bacillota
GGG
Pro
>WENV183612383
OODU01000067
152492
Bacillota
GGG
Pro
>WENV183613189
OODU01002291
144599
Bacillota
GTC
Asp
>WENV183614047
OODU01022805
100326
Bacillota
GTA
Tyr
>WENV183613503
OODU01005448
100326
Bacillota
GTA
Tyr
>WENV183613228
OODU01002557
100326
Bacillota
GTA
Tyr
>WENV183614287
OODU01043850
144610
Bacillota
GTG
His
>WENV183613772
OODU01011348
144610
Bacillota
GTG
His
>WENV183613636
OODU01007636
353537
Bacillota
GTT
Asn
>WENV183614151
OODU01029127
411547
Bacillota
CTG
Gln
>WENV183613584
OODU01006736
411547
Bacillota
CTG
Gln
>WENV183613178
OODU01002223
411547
Bacillota
CTG
Gln
>WENV183612578
OODU01000310
411547
Bacillota
CTG
Gln
>WENV183612563
OODU01000287
411547
Bacillota
CTG
Gln
>WENV183612439
OODU01000121
411547
Bacillota
CTG
Gln
>WENV183612296
OODU01000009
411547
Bacillota
CTG
Gln
>WENV183614396
OODU01060564
147684
Bacillota
ACG
Arg
>WENV183613704
OODU01009273
147684
Bacillota
ACG
Arg
>WENV183613371
OODU01003672
147684
Bacillota
ACG
Arg
>WENV183613356
OODU01003560
147684
Bacillota
ACG
Arg
>WENV183612954
OODU01001262
147684
Bacillota
ACG
Arg
>WENV183612916
OODU01001062
4624
Bacillota
GCT
Ser
>WENV183612705
OODU01000509
4624
Bacillota
GCT
Ser
>WENV183612490
OODU01000176
4624
Bacillota
GCT
Ser
>WENV183614102
OODU01026159
263765
Bacillota
TAC
Val
>WENV183614098
OODU01026159
263765
Bacillota
TAC
Val
>WENV183614040
OODU01022281
412387
Bacillota
GCA
Cys
>WENV183613449
OODU01004474
412387
Bacillota
GCA
Cys
>WENV183612517
OODU01000236
412387
Bacillota
GCA
Cys
>WENV183612514
OODU01000236
412387
Bacillota
GCA
Cys
>WENV183614314
OODU01047584
411584
Bacillota
TCC
Gly
>WENV183613529
OODU01005827
18852
Bacillota
GCT
Ser
>WENV183613015
OODU01001482
18852
Bacillota
GCT
Ser
>WENV183612988
OODU01001386
18852
Bacillota
GCT
Ser
>WENV183613475
OODU01004770
235095
Bacillota
GGT
Thr
>WENV183613230
OODU01002560
235095
Bacillota
GGT
Thr
>WENV183613134
OODU01002002
235095
Bacillota
GGT
Thr
>WENV183612834
OODU01000769
235095
Bacillota
GGT
Thr
>WENV183612833
OODU01000769
235095
Bacillota
GGT
Thr
>WENV183613882
OODU01015576
241471
Bacillota
TGC
Ala
>WENV183613304
OODU01003163
239832
Bacillota
TGT
Thr
>WENV183614385
OODU01058446
185292
Bacillota
ACG
Arg
>WENV183614229
OODU01036584
185292
Bacillota
ACG
Arg
>WENV183614023
OODU01021657
152151
Bacillota
TCT
Arg
>WENV183614348
OODU01052355
148057
Bacillota
CAT
Met
>WENV183612814
OODU01000727
419639
Bacillota
GCA
Cys
>WENV183613831
OODU01013536
239079
Bacillota
TAC
Val
>WENV183614429
OODU01069546
235289
Bacillota
GTT
Asn
>WENV183613969
OODU01019380
235289
Bacillota
GTT
Asn
>WENV183613365
OODU01003620
411549
Bacillota
TTG
Gln
>WENV183612438
OODU01000121
411549
Bacillota
TTG
Gln
>WENV183613982
OODU01019380
144767
Bacillota
GTG
His
>WENV183613576
OODU01006638
148188
Bacillota
CCG
Arg
>WENV183613476
OODU01004771
148188
Bacillota
CCG
Arg
>WENV183613103
OODU01001855
148188
Bacillota
CCG
Arg
>WENV183612658
OODU01000440
148188
Bacillota
CCG
Arg
>WENV183613278
OODU01002943
237846
Bacillota
GCC
Gly
>WENV183613325
OODU01003301
80612
Bacillota
GTA
Tyr
>WENV183612562
OODU01000287
80612
Bacillota
GTA
Tyr
>WENV183612465
OODU01000144
80612
Bacillota
GTA
Tyr
>WENV183613184
OODU01002273
256380
Bacillota
>WENV183613909
OODU01016666
235127
Bacillota
TTT
Lys
>WENV183613860
OODU01014627
235127
Bacillota
TTT
Lys
>WENV183613542
OODU01005918
235127
Bacillota
TTT
Lys
>WENV183613343
OODU01003472
235127
Bacillota
TTT
Lys
>WENV183612509
OODU01000226
235127
Bacillota
TTT
Lys
>WENV183612478
OODU01000167
235127
Bacillota
TTT
Lys
>WENV183613980
OODU01019380
144764
Bacillota
CAT
Met
>WENV183613539
OODU01005918
147674
Bacillota
TCT
Arg
>WENV183614187
OODU01032879
241432
Bacillota
TGT
Thr
>WENV183612359
OODU01000051
241432
Bacillota
TGT
Thr
>WENV183613972
OODU01019380
113612
Bacillota
TAG
Leu
>WENV183614280
OODU01042694
235124
Bacillota
TGG
Pro
>WENV183613868
OODU01015184
235124
Bacillota
TGG
Pro
>WENV183613037
OODU01001600
235124
Bacillota
TGG
Pro
>WENV183612713
OODU01000524
235124
Bacillota
TGG
Pro
>WENV183614159
OODU01029535
237963
Bacillota
TTT
Lys
>WENV183613791
OODU01011847
254433
Bacillota
TAC
Val
>WENV183613429
OODU01004311
254433
Bacillota
TAC
Val
>WENV183613190
OODU01002291
254433
Bacillota
TAC
Val
>WENV183612951
OODU01001245
254433
Bacillota
TAC
Val
>WENV183612468
OODU01000148
254433
Bacillota
TAC
Val
>WENV183613090
OODU01001816
338129
Bacillota
TGT
Thr
>WENV183612476
OODU01000163
338129
Bacillota
TGT
Thr
>WENV183614258
OODU01040825
157838
Bacillota
GTC
Asp
>WENV183613293
OODU01003122
144583
Bacillota
ACG
Arg
>WENV183612663
OODU01000449
144583
Bacillota
ACG
Arg
>WENV183614332
OODU01050011
144672
Bacillota
TCT
Arg
>WENV183612944
OODU01001224
144672
Bacillota
TCT
Arg
>WENV183612329
OODU01000031
144672
Bacillota
TCT
Arg
>WENV183613957
OODU01019361
419877
Bacillota
TCC
Gly
>WENV183613297
OODU01003159
419877
Bacillota
TCC
Gly
>WENV183612675
OODU01000484
419877
Bacillota
TCC
Gly
>WENV183612628
OODU01000381
419877
Bacillota
TCC
Gly
>WENV183613473
OODU01004770
235171
Bacillota
CCA
Trp
>WENV183613133
OODU01002002
235171
Bacillota
CCA
Trp
>WENV183613533
OODU01005883
238974
Bacillota
GAA
Phe
>WENV183613679
OODU01008575
144621
Bacillota
GTT
Asn
>WENV183613582
OODU01006684
144621
Bacillota
GTT
Asn
>WENV183613450
OODU01004491
144621
Bacillota
GTT
Asn
>WENV183613164
OODU01002125
144621
Bacillota
GTT
Asn
>WENV183612672
OODU01000475
144621
Bacillota
GTT
Asn
>WENV183613615
OODU01007086
277200
Bacillota
GGC
Ala
>WENV183614101
OODU01026159
353527
Bacillota
TTC
Glu
>WENV183613333
OODU01003385
243098
Bacillota
GGT
Thr
>WENV183613148
OODU01002066
58712
Bacillota
CAG
Leu
>WENV183612588
OODU01000315
58712
Bacillota
CAG
Leu
>WENV183612436
OODU01000121
58712
Bacillota
CAG
Leu
>WENV183613974
OODU01019380
144762
Bacillota
TCT
Arg
>WENV183613337
OODU01003415
245296
Bacillota
CCC
Gly
>WENV183612431
OODU01000116
245296
Bacillota
CCC
Gly
>WENV183614152
OODU01029442
272992
Bacillota
CTT
Lys
>WENV183613829
OODU01013536
239078
Bacillota
TTT
Lys
>WENV183613317
OODU01003240
239078
Bacillota
TTT
Lys
>WENV183613170
OODU01002172
344240
Bacillota
GCC
Gly
>WENV183612919
OODU01001071
344240
Bacillota
GCC
Gly
>WENV183612813
OODU01000727
344240
Bacillota
GCC
Gly
>WENV183614327
OODU01049900
261708
Bacillota
CCA
Trp
>WENV183613572
OODU01006521
242686
Bacillota
TGC
Ala
>WENV183613298
OODU01003159
157635
Bacillota
TCT
Arg
>WENV183613585
OODU01006798
144594
Bacillota
CAC
Val
>WENV183612480
OODU01000169
144594
Bacillota
CAC
Val
>WENV183612437
OODU01000121
144594
Bacillota
CAC
Val
>WENV183613634
OODU01007493
414486
Bacillota
CCC
Gly
>WENV183614337
OODU01050231
272488
Bacillota
GAA
Phe
>WENV183614069
OODU01024610
272488
Bacillota
GAA
Phe
>WENV183614048
OODU01022808
272488
Bacillota
GAA
Phe
>WENV183613693
OODU01009069
272488
Bacillota
GAA
Phe
>WENV183613616
OODU01007087
272488
Bacillota
GAA
Phe
>WENV183613517
OODU01005794
272488
Bacillota
GAA
Phe
>WENV183613442
OODU01004453
272488
Bacillota
GAA
Phe
>WENV183613040
OODU01001616
272488
Bacillota
GAA
Phe
>WENV183612978
OODU01001353
272488
Bacillota
GAA
Phe
>WENV183612947
OODU01001236
272488
Bacillota
GAA
Phe
>WENV183612878
OODU01000922
272488
Bacillota
GAA
Phe
>WENV183612477
OODU01000167
272488
Bacillota
GAA
Phe
>WENV183613428
OODU01004310
114075
Bacillota
TAG
Leu
>WENV183614283
OODU01043034
238945
Bacillota
GCC
Gly
>WENV183614116
OODU01026685
238945
Bacillota
GCC
Gly
>WENV183613952
OODU01018932
238945
Bacillota
GCC
Gly
>WENV183613783
OODU01011665
238945
Bacillota
GCC
Gly
>WENV183613629
OODU01007422
238945
Bacillota
GCC
Gly
>WENV183613026
OODU01001506
238945
Bacillota
GCC
Gly
>WENV183613397
OODU01004019
249259
Bacillota
GCC
Gly
>WENV183613354
OODU01003552
249259
Bacillota
GCC
Gly
>WENV183613197
OODU01002308
249259
Bacillota
GCC
Gly
>WENV183612953
OODU01001258
249259
Bacillota
GCC
Gly
>WENV183612835
OODU01000773
249259
Bacillota
GCC
Gly
>WENV183612816
OODU01000728
249259
Bacillota
GCC
Gly
>WENV183612726
OODU01000533
249259
Bacillota
GCC
Gly
>WENV183612674
OODU01000483
249259
Bacillota
GCC
Gly
>WENV183612626
OODU01000376
249259
Bacillota
GCC
Gly
>WENV183614383
OODU01058245
273862
Bacillota
TGC
Ala
>WENV183612565
OODU01000290
273862
Bacillota
TGC
Ala
>WENV183612569
OODU01000297
338131
Bacillota
GCC
Gly
>WENV183612415
OODU01000097
338131
Bacillota
GCC
Gly
>WENV183613965
OODU01019380
338207
Bacillota
TTC
Glu
>WENV183614137
OODU01028488
338128
Bacillota
TTC
Glu
>WENV183613432
OODU01004335
338128
Bacillota
TTC
Glu
>WENV183613339
OODU01003431
338128
Bacillota
TTC
Glu
>WENV183613055
OODU01001702
338128
Bacillota
TTC
Glu
>WENV183612660
OODU01000440
338128
Bacillota
TTC
Glu
>WENV183613047
OODU01001654
245344
Bacillota
GAA
Phe
>WENV183612812
OODU01000727
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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