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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170823564
MDSY01060045
275457
Gammaproteobacteria
ACG
Arg
>WENV170823832
MDSY01064920
275457
Gammaproteobacteria
ACG
Arg
>WENV170823833
MDSY01064920
275457
Gammaproteobacteria
ACG
Arg
>WENV170827687
MDSY01134359
275457
Gammaproteobacteria
ACG
Arg
>WENV170823881
MDSY01066008
452599
Gammaproteobacteria
TAC
Val
>WENV170828367
MDSY01148458
779604
Gammaproteobacteria
GCA
Cys
>WENV170824432
MDSY01075889
457453
Gammaproteobacteria
TTT
Lys
>WENV170821952
MDSY01031271
112989
Gammaproteobacteria
TAA
Leu
>WENV170824733
MDSY01081201
278579
Gammaproteobacteria
GTC
Asp
>WENV170820583
MDSY01007077
271464
Gammaproteobacteria
TGG
Pro
>WENV170820585
MDSY01007077
452415
Gammaproteobacteria
GTG
His
>WENV170825905
MDSY01102024
46027
Gammaproteobacteria
GGA
Ser
>WENV170822761
MDSY01045955
271393
Gammaproteobacteria
CAT
Met
>WENV170820411
MDSY01004256
277479
Gammaproteobacteria
CAT
Met
>WENV170828872
MDSY01157126
274166
Gammaproteobacteria
GAC
Val
>WENV170827257
MDSY01125413
278942
Gammaproteobacteria
CCG
Arg
>WENV170820931
MDSY01013777
452605
Gammaproteobacteria
GGC
Ala
>WENV170821693
MDSY01026254
456706
Gammaproteobacteria
TGT
Thr
>WENV170825056
MDSY01086838
456706
Gammaproteobacteria
TGT
Thr
>WENV170825162
MDSY01088310
456706
Gammaproteobacteria
TGT
Thr
>WENV170821416
MDSY01021928
779641
Gammaproteobacteria
TCC
Gly
>WENV170822262
MDSY01037052
779641
Gammaproteobacteria
TCC
Gly
>WENV170828142
MDSY01143745
276974
Gammaproteobacteria
GGG
Pro
>WENV170827631
MDSY01133258
460422
Gammaproteobacteria
TAC
Val
>WENV170820413
MDSY01004256
657233
Gammaproteobacteria
TTG
Gln
>WENV170821649
MDSY01025691
30865
Gammaproteobacteria
GCT
Ser
>WENV170828410
MDSY01149453
30865
Gammaproteobacteria
GCT
Ser
>WENV170821651
MDSY01025691
276971
Gammaproteobacteria
ACG
Arg
>WENV170823183
MDSY01053066
276971
Gammaproteobacteria
ACG
Arg
>WENV170828411
MDSY01149453
276971
Gammaproteobacteria
ACG
Arg
>WENV170823995
MDSY01068165
454096
Gammaproteobacteria
GCC
Gly
>WENV170825292
MDSY01090390
457171
Gammaproteobacteria
GTT
Asn
>WENV170827299
MDSY01126365
457171
Gammaproteobacteria
GTT
Asn
>WENV170827882
MDSY01138295
457171
Gammaproteobacteria
GTT
Asn
>WENV170823925
MDSY01066826
274864
Gammaproteobacteria
ACG
Arg
>WENV170828883
MDSY01157244
655146
Gammaproteobacteria
CCG
Arg
>WENV170822143
MDSY01034638
12379
Gammaproteobacteria
GCT
Ser
>WENV170822096
MDSY01034057
278155
Gammaproteobacteria
TGG
Pro
>WENV170821470
MDSY01022734
451982
Gammaproteobacteria
GGC
Ala
>WENV170820302
MDSY01002040
655147
Gammaproteobacteria
TTG
Gln
>WENV170823474
MDSY01058311
271254
Gammaproteobacteria
CAT
Met
>WENV170826673
MDSY01114866
46525
Gammaproteobacteria
GCT
Ser
>WENV170822277
MDSY01037408
454856
Gammaproteobacteria
GCC
Gly
>WENV170827284
MDSY01125858
653944
Gammaproteobacteria
GCC
Gly
>WENV170823264
MDSY01054262
452597
Gammaproteobacteria
TTG
Gln
>WENV170823263
MDSY01054262
452597
Gammaproteobacteria
TTG
Gln
>WENV170823367
MDSY01056274
459789
Gammaproteobacteria
GTT
Asn
>WENV170823724
MDSY01062663
657785
Gammaproteobacteria
TTG
Gln
>WENV170823727
MDSY01062663
657785
Gammaproteobacteria
TTG
Gln
>WENV170821163
MDSY01017141
276973
Gammaproteobacteria
GAC
Val
>WENV170822518
MDSY01041628
276973
Gammaproteobacteria
GAC
Val
>WENV170822790
MDSY01046421
780642
Gammaproteobacteria
GCA
Cys
>WENV170821335
MDSY01020504
452332
Gammaproteobacteria
GTG
His
>WENV170820655
MDSY01008187
271287
Gammaproteobacteria
CAT
Met
>WENV170823982
MDSY01067932
454090
Gammaproteobacteria
GTT
Asn
>WENV170823983
MDSY01067932
454090
Gammaproteobacteria
GTT
Asn
>WENV170827630
MDSY01133234
278982
Gammaproteobacteria
CCG
Arg
>WENV170828474
MDSY01150772
278982
Gammaproteobacteria
CCG
Arg
>WENV170820335
MDSY01002898
452412
Gammaproteobacteria
GCC
Gly
>WENV170828366
MDSY01148458
452412
Gammaproteobacteria
GCC
Gly
>WENV170827258
MDSY01125426
460378
Gammaproteobacteria
TAC
Val
>WENV170822738
MDSY01045495
30516
Gammaproteobacteria
TGA
Ser
>WENV170823955
MDSY01067385
271460
Gammaproteobacteria
CGG
Pro
>WENV170824835
MDSY01083157
218344
Gammaproteobacteria
GTA
Tyr
>WENV170823398
MDSY01056919
113737
Gammaproteobacteria
CAA
Leu
>WENV170823723
MDSY01062663
454424
Gammaproteobacteria
GAA
Phe
>WENV170823726
MDSY01062663
454424
Gammaproteobacteria
GAA
Phe
>WENV170822367
MDSY01039139
275658
Gammaproteobacteria
TGG
Pro
>WENV170821288
MDSY01019544
274148
Gammaproteobacteria
GTC
Asp
>WENV170823430
MDSY01057392
458426
Gammaproteobacteria
TTC
Glu
>WENV170825107
MDSY01087489
458426
Gammaproteobacteria
TTC
Glu
>WENV170823121
MDSY01051742
459752
Gammaproteobacteria
TTC
Glu
>WENV170822215
MDSY01036295
273754
Gammaproteobacteria
GTT
Asn
>WENV170824903
MDSY01083912
273754
Gammaproteobacteria
GTT
Asn
>WENV170824904
MDSY01083912
273754
Gammaproteobacteria
GTT
Asn
>WENV170825468
MDSY01093482
273754
Gammaproteobacteria
GTT
Asn
>WENV170827150
MDSY01123804
273754
Gammaproteobacteria
GTT
Asn
>WENV170827532
MDSY01131040
273754
Gammaproteobacteria
GTT
Asn
>WENV170827357
MDSY01127692
452377
Gammaproteobacteria
GTT
Asn
>WENV170825819
MDSY01100547
451732
Gammaproteobacteria
GCC
Gly
>WENV170827056
MDSY01122092
459731
Gammaproteobacteria
GGT
Thr
>WENV170823019
MDSY01050060
459731
Gammaproteobacteria
GGT
Thr
>WENV170826105
MDSY01105380
459731
Gammaproteobacteria
GGT
Thr
>WENV170820558
MDSY01006703
452604
Gammaproteobacteria
TTC
Glu
>WENV170820932
MDSY01013777
452604
Gammaproteobacteria
TTC
Glu
>WENV170827917
MDSY01139039
452604
Gammaproteobacteria
TTC
Glu
>WENV170827785
MDSY01136188
113485
Gammaproteobacteria
CAA
Leu
>WENV170826674
MDSY01114866
274723
Gammaproteobacteria
ACG
Arg
>WENV170821414
MDSY01021928
452607
Gammaproteobacteria
TGT
Thr
>WENV170825687
MDSY01097927
271616
Gammaproteobacteria
CAT
Met
>WENV170821681
MDSY01026067
452881
Gammaproteobacteria
TGT
Thr
>WENV170822233
MDSY01036735
452881
Gammaproteobacteria
TGT
Thr
>WENV170821471
MDSY01022734
459479
Gammaproteobacteria
TTC
Glu
>WENV170820919
MDSY01013726
271613
Gammaproteobacteria
GTC
Asp
>WENV170821411
MDSY01021857
271613
Gammaproteobacteria
GTC
Asp
>WENV170826313
MDSY01108563
271613
Gammaproteobacteria
GTC
Asp
>WENV170828250
MDSY01145960
460500
Gammaproteobacteria
TAC
Val
>WENV170822445
MDSY01040044
452603
Gammaproteobacteria
CCA
Trp
>WENV170821415
MDSY01021928
218041
Gammaproteobacteria
GTA
Tyr
>WENV170821018
MDSY01014938
277966
Gammaproteobacteria
CAT
Met
>WENV170825695
MDSY01098099
276972
Gammaproteobacteria
CCA
Trp
>WENV170827085
MDSY01122727
276972
Gammaproteobacteria
CCA
Trp
>WENV170820204
MDSY01000391
271286
Gammaproteobacteria
CAT
Met
>WENV170822139
MDSY01034562
277478
Gammaproteobacteria
CCA
Trp
>WENV170820432
MDSY01004665
459319
Gammaproteobacteria
GAA
Phe
>WENV170823636
MDSY01061134
457459
Gammaproteobacteria
GGC
Ala
>WENV170827432
MDSY01128877
457459
Gammaproteobacteria
GGC
Ala
>WENV170826200
MDSY01107000
453897
Gammaproteobacteria
TAC
Val
>WENV170820951
MDSY01013946
454397
Gammaproteobacteria
TGT
Thr
>WENV170823016
MDSY01050060
454397
Gammaproteobacteria
TGT
Thr
>WENV170821082
MDSY01015919
112884
Gammaproteobacteria
CAG
Leu
>WENV170821085
MDSY01015919
112884
Gammaproteobacteria
CAG
Leu
>WENV170824537
MDSY01077662
276975
Gammaproteobacteria
TGG
Pro
>WENV170820930
MDSY01013768
459406
Gammaproteobacteria
TAC
Val
>WENV170821782
MDSY01028082
459406
Gammaproteobacteria
TAC
Val
>WENV170821417
MDSY01021928
655603
Gammaproteobacteria
GGT
Thr
>WENV170822263
MDSY01037052
655603
Gammaproteobacteria
GGT
Thr
>WENV170824557
MDSY01077997
452600
Gammaproteobacteria
GTT
Asn
>WENV170820541
MDSY01006467
454860
Gammaproteobacteria
TGT
Thr
>WENV170827385
MDSY01128294
276372
Gammaproteobacteria
ACG
Arg
>WENV170823319
MDSY01055130
271253
Gammaproteobacteria
CAT
Met
>WENV170825106
MDSY01087489
454091
Gammaproteobacteria
GGC
Ala
>WENV170820503
MDSY01005828
274093
Gammaproteobacteria
GTC
Asp
>WENV170828335
MDSY01147711
452601
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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