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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183718760
PDWJ01006399
95983
Gammaproteobacteria
>WENV183719782
PDWJ01020220
279824
Gammaproteobacteria
>WENV183718392
PDWJ01003742
279824
Gammaproteobacteria
>WENV183716842
PDWJ01000224
158396
Gammaproteobacteria
ACG
Arg
>WENV183716843
PDWJ01000224
158396
Gammaproteobacteria
ACG
Arg
>WENV183716844
PDWJ01000224
158396
Gammaproteobacteria
ACG
Arg
>WENV183716677
PDWJ01000132
171935
Gammaproteobacteria
ACG
Arg
>WENV183718932
PDWJ01007846
154268
Gammaproteobacteria
ACG
Arg
>WENV183717305
PDWJ01000712
145366
Gammaproteobacteria
ACG
Arg
>WENV183717147
PDWJ01000505
145366
Gammaproteobacteria
ACG
Arg
>WENV183722556
PDWJ01138439
70057
Gammaproteobacteria
CAG
Leu
>WENV183722621
PDWJ01143697
147023
Gammaproteobacteria
CAT
Met
>WENV183719929
PDWJ01023211
199859
Gammaproteobacteria
CAT
Met
>WENV183719932
PDWJ01023271
199984
Gammaproteobacteria
CAT
Met
>WENV183720411
PDWJ01033741
149073
Gammaproteobacteria
CAT
Met
>WENV183718341
PDWJ01003422
158933
Gammaproteobacteria
CAT
Met
>WENV183720050
PDWJ01025363
147051
Gammaproteobacteria
CAT
Met
>WENV183722597
PDWJ01141712
149661
Gammaproteobacteria
CAT
Met
>WENV183722476
PDWJ01132136
149661
Gammaproteobacteria
CAT
Met
>WENV183721925
PDWJ01094827
149661
Gammaproteobacteria
CAT
Met
>WENV183721458
PDWJ01070650
149661
Gammaproteobacteria
CAT
Met
>WENV183721277
PDWJ01062142
149661
Gammaproteobacteria
CAT
Met
>WENV183721256
PDWJ01061082
149661
Gammaproteobacteria
CAT
Met
>WENV183721043
PDWJ01053087
149661
Gammaproteobacteria
CAT
Met
>WENV183720873
PDWJ01047889
149661
Gammaproteobacteria
CAT
Met
>WENV183720236
PDWJ01029951
149661
Gammaproteobacteria
CAT
Met
>WENV183719404
PDWJ01013852
149661
Gammaproteobacteria
CAT
Met
>WENV183719327
PDWJ01012387
149661
Gammaproteobacteria
CAT
Met
>WENV183716896
PDWJ01000248
149661
Gammaproteobacteria
CAT
Met
>WENV183720288
PDWJ01030935
236030
Gammaproteobacteria
CCA
Trp
>WENV183720698
PDWJ01042006
236030
Gammaproteobacteria
CCA
Trp
>WENV183721703
PDWJ01081410
236030
Gammaproteobacteria
CCA
Trp
>WENV183718299
PDWJ01003278
281920
Gammaproteobacteria
CCA
Trp
>WENV183721938
PDWJ01095795
150183
Gammaproteobacteria
CCG
Arg
>WENV183717910
PDWJ01001942
153036
Gammaproteobacteria
CCT
Arg
>WENV183717353
PDWJ01000781
153036
Gammaproteobacteria
CCT
Arg
>WENV183719038
PDWJ01009074
235452
Gammaproteobacteria
GAA
Phe
>WENV183717949
PDWJ01002016
235452
Gammaproteobacteria
GAA
Phe
>WENV183719959
PDWJ01023907
289927
Gammaproteobacteria
GAA
Phe
>WENV183718908
PDWJ01007598
289927
Gammaproteobacteria
GAA
Phe
>WENV183716675
PDWJ01000131
289927
Gammaproteobacteria
GAA
Phe
>WENV183717656
PDWJ01001333
148148
Gammaproteobacteria
GAC
Val
>WENV183716515
PDWJ01000032
148148
Gammaproteobacteria
GAC
Val
>WENV183721265
PDWJ01061593
185755
Gammaproteobacteria
GAT
Ile
>WENV183719888
PDWJ01022319
193275
Gammaproteobacteria
GAT
Ile
>WENV183719490
PDWJ01015077
195303
Gammaproteobacteria
GAT
Ile
>WENV183722552
PDWJ01138247
426403
Gammaproteobacteria
GCA
Cys
>WENV183721347
PDWJ01065284
426403
Gammaproteobacteria
GCA
Cys
>WENV183720177
PDWJ01028524
426403
Gammaproteobacteria
GCA
Cys
>WENV183718785
PDWJ01006561
421020
Gammaproteobacteria
GCA
Cys
>WENV183717913
PDWJ01001956
421020
Gammaproteobacteria
GCA
Cys
>WENV183717297
PDWJ01000700
421020
Gammaproteobacteria
GCA
Cys
>WENV183717007
PDWJ01000365
421020
Gammaproteobacteria
GCA
Cys
>WENV183722104
PDWJ01105723
411735
Gammaproteobacteria
GCA
Cys
>WENV183721850
PDWJ01090790
23442
Gammaproteobacteria
GCT
Ser
>WENV183718091
PDWJ01002376
45459
Gammaproteobacteria
GGA
Ser
>WENV183719597
PDWJ01016924
322642
Gammaproteobacteria
GGT
Thr
>WENV183718957
PDWJ01008101
322642
Gammaproteobacteria
GGT
Thr
>WENV183721845
PDWJ01090573
377665
Gammaproteobacteria
GGT
Thr
>WENV183721023
PDWJ01052577
377665
Gammaproteobacteria
GGT
Thr
>WENV183718955
PDWJ01008101
115067
Gammaproteobacteria
GTA
Tyr
>WENV183722466
PDWJ01131421
173617
Gammaproteobacteria
GTC
Asp
>WENV183722377
PDWJ01123640
173617
Gammaproteobacteria
GTC
Asp
>WENV183721988
PDWJ01098296
173617
Gammaproteobacteria
GTC
Asp
>WENV183720826
PDWJ01046698
173617
Gammaproteobacteria
GTC
Asp
>WENV183720221
PDWJ01029534
173617
Gammaproteobacteria
GTC
Asp
>WENV183720130
PDWJ01027150
173617
Gammaproteobacteria
GTC
Asp
>WENV183718969
PDWJ01008188
249882
Gammaproteobacteria
GTT
Asn
>WENV183718330
PDWJ01003358
249882
Gammaproteobacteria
GTT
Asn
>WENV183718329
PDWJ01003358
249882
Gammaproteobacteria
GTT
Asn
>WENV183718786
PDWJ01006561
73305
Gammaproteobacteria
TAA
Leu
>WENV183716908
PDWJ01000257
290337
Gammaproteobacteria
TAC
Val
>WENV183716906
PDWJ01000257
290337
Gammaproteobacteria
TAC
Val
>WENV183716635
PDWJ01000091
290337
Gammaproteobacteria
TAC
Val
>WENV183716633
PDWJ01000091
290337
Gammaproteobacteria
TAC
Val
>WENV183718073
PDWJ01002297
237412
Gammaproteobacteria
TAC
Val
>WENV183718138
PDWJ01002562
319098
Gammaproteobacteria
TAC
Val
>WENV183718672
PDWJ01005770
99112
Gammaproteobacteria
TAG
Leu
>WENV183719118
PDWJ01009865
341109
Gammaproteobacteria
TCC
Gly
>WENV183721844
PDWJ01090573
412476
Gammaproteobacteria
TCC
Gly
>WENV183717693
PDWJ01001411
173648
Gammaproteobacteria
TCT
Arg
>WENV183720271
PDWJ01030657
16453
Gammaproteobacteria
TGA
Ser
>WENV183716702
PDWJ01000142
16453
Gammaproteobacteria
TGA
Ser
>WENV183722600
PDWJ01141889
159514
Gammaproteobacteria
TGG
Pro
>WENV183720835
PDWJ01046956
159514
Gammaproteobacteria
TGG
Pro
>WENV183720782
PDWJ01045321
159514
Gammaproteobacteria
TGG
Pro
>WENV183718332
PDWJ01003358
159514
Gammaproteobacteria
TGG
Pro
>WENV183718331
PDWJ01003358
159514
Gammaproteobacteria
TGG
Pro
>WENV183716965
PDWJ01000317
159514
Gammaproteobacteria
TGG
Pro
>WENV183718182
PDWJ01002713
198797
Gammaproteobacteria
TGG
Pro
>WENV183717500
PDWJ01001012
198797
Gammaproteobacteria
TGG
Pro
>WENV183717374
PDWJ01000824
312287
Gammaproteobacteria
TGT
Thr
>WENV183719116
PDWJ01009865
312287
Gammaproteobacteria
TGT
Thr
>WENV183720783
PDWJ01045338
312287
Gammaproteobacteria
TGT
Thr
>WENV183721450
PDWJ01070308
237421
Gammaproteobacteria
TGT
Thr
>WENV183718223
PDWJ01002866
237421
Gammaproteobacteria
TGT
Thr
>WENV183717764
PDWJ01001553
283840
Gammaproteobacteria
TTC
Glu
>WENV183717762
PDWJ01001553
283840
Gammaproteobacteria
TTC
Glu
>WENV183717761
PDWJ01001553
283840
Gammaproteobacteria
TTC
Glu
>WENV183722101
PDWJ01105659
301997
Gammaproteobacteria
TTC
Glu
>WENV183721815
PDWJ01088789
301997
Gammaproteobacteria
TTC
Glu
>WENV183721814
PDWJ01088789
301997
Gammaproteobacteria
TTC
Glu
>WENV183721813
PDWJ01088789
301997
Gammaproteobacteria
TTC
Glu
>WENV183720787
PDWJ01045408
301997
Gammaproteobacteria
TTC
Glu
>WENV183720475
PDWJ01035159
301997
Gammaproteobacteria
TTC
Glu
>WENV183720474
PDWJ01035159
301997
Gammaproteobacteria
TTC
Glu
>WENV183720128
PDWJ01027128
301997
Gammaproteobacteria
TTC
Glu
>WENV183720105
PDWJ01026432
301997
Gammaproteobacteria
TTC
Glu
>WENV183720104
PDWJ01026432
301997
Gammaproteobacteria
TTC
Glu
>WENV183719683
PDWJ01018591
301997
Gammaproteobacteria
TTC
Glu
>WENV183716689
PDWJ01000134
301997
Gammaproteobacteria
TTC
Glu
>WENV183716688
PDWJ01000134
301997
Gammaproteobacteria
TTC
Glu
>WENV183717663
PDWJ01001338
238433
Gammaproteobacteria
TTC
Glu
>WENV183717620
PDWJ01001231
238433
Gammaproteobacteria
TTC
Glu
>WENV183717548
PDWJ01001106
238433
Gammaproteobacteria
TTC
Glu
>WENV183716983
PDWJ01000329
238433
Gammaproteobacteria
TTC
Glu
>WENV183719398
PDWJ01013782
358545
Gammaproteobacteria
TTC
Glu
>WENV183721663
PDWJ01079516
236025
Gammaproteobacteria
TTG
Gln
>WENV183721662
PDWJ01079516
236025
Gammaproteobacteria
TTG
Gln
>WENV183720026
PDWJ01025101
236025
Gammaproteobacteria
TTG
Gln
>WENV183719527
PDWJ01015590
236025
Gammaproteobacteria
TTG
Gln
>WENV183720952
PDWJ01050393
293820
Gammaproteobacteria
TTT
Lys
>WENV183720435
PDWJ01034407
293820
Gammaproteobacteria
TTT
Lys
>WENV183721853
PDWJ01090985
240082
Gammaproteobacteria
TTT
Lys
>WENV183721827
PDWJ01089411
240082
Gammaproteobacteria
TTT
Lys
>WENV183721826
PDWJ01089411
240082
Gammaproteobacteria
TTT
Lys
>WENV183721743
PDWJ01083406
240082
Gammaproteobacteria
TTT
Lys
>WENV183720000
PDWJ01024477
240082
Gammaproteobacteria
TTT
Lys
>WENV183719999
PDWJ01024477
240082
Gammaproteobacteria
TTT
Lys
>WENV183717397
PDWJ01000855
240082
Gammaproteobacteria
TTT
Lys
>WENV183716825
PDWJ01000215
240082
Gammaproteobacteria
TTT
Lys
>WENV183721972
PDWJ01097710
278259
Gammaproteobacteria
TTT
Lys
>WENV183721274
PDWJ01061978
278259
Gammaproteobacteria
TTT
Lys
>WENV183720603
PDWJ01039062
278259
Gammaproteobacteria
TTT
Lys
>WENV183719328
PDWJ01012412
278259
Gammaproteobacteria
TTT
Lys
>WENV183717654
PDWJ01001333
243921
Gammaproteobacteria
TTT
Lys
>WENV183716514
PDWJ01000032
243921
Gammaproteobacteria
TTT
Lys
>WENV183716513
PDWJ01000032
243921
Gammaproteobacteria
TTT
Lys
>WENV183719487
PDWJ01015018
277270
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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