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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
214 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV047201
AACY022645979
284937
Betaproteobacteria
TAC
Val
>WENV000327
AACY020009708
239991
Betaproteobacteria
TGG
Pro
>WENV001136
AACY020034872
239991
Betaproteobacteria
TGG
Pro
>WENV001374
AACY020039903
239991
Betaproteobacteria
TGG
Pro
>WENV027209
AACY021028351
239991
Betaproteobacteria
TGG
Pro
>WENV027275
AACY021032915
239991
Betaproteobacteria
TGG
Pro
>WENV044936
AACY022467804
239991
Betaproteobacteria
TGG
Pro
>WENV056500
AACY023258332
239991
Betaproteobacteria
TGG
Pro
>WENV057507
AACY023297070
239991
Betaproteobacteria
TGG
Pro
>WENV058203
AACY023321056
239991
Betaproteobacteria
TGG
Pro
>WENV061839
AACY023441989
239991
Betaproteobacteria
TGG
Pro
>WENV076389
AACY024096178
239991
Betaproteobacteria
TGG
Pro
>WENV012901
AACY020352825
73408
Betaproteobacteria
TAG
Leu
>WENV001174
AACY020035727
212101
Betaproteobacteria
GAT
Ile
>WENV005690
AACY020159143
212101
Betaproteobacteria
GAT
Ile
>WENV016680
AACY020468189
212101
Betaproteobacteria
GAT
Ile
>WENV020495
AACY020554669
212101
Betaproteobacteria
GAT
Ile
>WENV026126
AACY020942159
212101
Betaproteobacteria
GAT
Ile
>WENV032714
AACY021468897
212101
Betaproteobacteria
GAT
Ile
>WENV001827
AACY020052165
283940
Betaproteobacteria
TTC
Glu
>WENV016766
AACY020469516
283940
Betaproteobacteria
TTC
Glu
>WENV029386
AACY021194737
283940
Betaproteobacteria
TTC
Glu
>WENV059010
AACY023350568
283940
Betaproteobacteria
TTC
Glu
>WENV042843
AACY022269985
284938
Betaproteobacteria
TTT
Lys
>WENV057227
AACY023288995
284938
Betaproteobacteria
TTT
Lys
>WENV057830
AACY023308063
284938
Betaproteobacteria
TTT
Lys
>WENV001928
AACY020054199
481455
Betaproteobacteria
TCC
Gly
>WENV016920
AACY020472296
481455
Betaproteobacteria
TCC
Gly
>WENV027198
AACY021026437
328243
Betaproteobacteria
CCG
Arg
>WENV058958
AACY023348675
328243
Betaproteobacteria
CCG
Arg
>WENV002015
AACY020056722
188716
Betaproteobacteria
ACG
Arg
>WENV012973
AACY020355167
330401
Betaproteobacteria
GCC
Gly
>WENV012974
AACY020355167
330401
Betaproteobacteria
GCC
Gly
>WENV012767
AACY020348518
282822
Betaproteobacteria
TGT
Thr
>WENV057962
AACY023312897
284940
Betaproteobacteria
GTG
His
>WENV058178
AACY023320204
284940
Betaproteobacteria
GTG
His
>WENV002016
AACY020056743
355840
Betaproteobacteria
TAC
Val
>WENV058506
AACY023331432
197278
Betaproteobacteria
CAT
Met
>WENV012666
AACY020344738
29649
Betaproteobacteria
CGA
Ser
>WENV012745
AACY020347917
219611
Betaproteobacteria
TCT
Arg
>WENV001930
AACY020054368
290590
Betaproteobacteria
TAC
Val
>WENV033588
AACY021542140
176850
Betaproteobacteria
TCT
Arg
>WENV013115
AACY020359431
20369
Betaproteobacteria
GGA
Ser
>WENV058755
AACY023340251
127222
Betaproteobacteria
CAG
Leu
>WENV025301
AACY020876727
281524
Betaproteobacteria
GAA
Phe
>WENV043862
AACY022365590
281524
Betaproteobacteria
GAA
Phe
>WENV045520
AACY022524586
281524
Betaproteobacteria
GAA
Phe
>WENV060349
AACY023395571
281524
Betaproteobacteria
GAA
Phe
>WENV057991
AACY023313913
401210
Betaproteobacteria
CCT
Arg
>WENV058098
AACY023317464
401210
Betaproteobacteria
CCT
Arg
>WENV000556
AACY020016789
284934
Betaproteobacteria
TGT
Thr
>WENV001869
AACY020053243
284934
Betaproteobacteria
TGT
Thr
>WENV016243
AACY020458977
284934
Betaproteobacteria
TGT
Thr
>WENV024651
AACY020825939
284934
Betaproteobacteria
TGT
Thr
>WENV026100
AACY020940355
284934
Betaproteobacteria
TGT
Thr
>WENV030984
AACY021328401
284934
Betaproteobacteria
TGT
Thr
>WENV055042
AACY023208761
284934
Betaproteobacteria
TGT
Thr
>WENV055577
AACY023232014
284934
Betaproteobacteria
TGT
Thr
>WENV058487
AACY023330785
284934
Betaproteobacteria
TGT
Thr
>WENV058989
AACY023349758
284934
Betaproteobacteria
TGT
Thr
>WENV061552
AACY023434587
284934
Betaproteobacteria
TGT
Thr
>WENV055505
AACY023229945
284297
Betaproteobacteria
TGT
Thr
>WENV062041
AACY023446955
333120
Betaproteobacteria
CCA
Trp
>WENV042148
AACY022215032
481456
Betaproteobacteria
GCA
Cys
>WENV057970
AACY023313154
481456
Betaproteobacteria
GCA
Cys
>WENV074961
AACY024006380
481456
Betaproteobacteria
GCA
Cys
>WENV057499
AACY023296740
176193
Betaproteobacteria
TTG
Gln
>WENV033868
AACY021561749
203178
Betaproteobacteria
GAT
Ile
>WENV012866
AACY020351632
194297
Betaproteobacteria
TTG
Gln
>WENV046640
AACY022613633
281431
Betaproteobacteria
GTT
Asn
>WENV055883
AACY023242905
281431
Betaproteobacteria
GTT
Asn
>WENV055903
AACY023243597
281431
Betaproteobacteria
GTT
Asn
>WENV033769
AACY021553571
429429
Betaproteobacteria
CAC
Val
>WENV012827
AACY020350292
73409
Betaproteobacteria
CAG
Leu
>WENV057509
AACY023297084
180112
Betaproteobacteria
TGG
Pro
>WENV057825
AACY023307996
180112
Betaproteobacteria
TGG
Pro
>WENV058014
AACY023314691
283006
Betaproteobacteria
GCC
Gly
>WENV058658
AACY023337742
283006
Betaproteobacteria
GCC
Gly
>WENV016756
AACY020469254
179360
Betaproteobacteria
TTG
Gln
>WENV058183
AACY023320348
284939
Betaproteobacteria
CCG
Arg
>WENV000315
AACY020009488
117806
Betaproteobacteria
GTA
Tyr
>WENV006638
AACY020177457
117806
Betaproteobacteria
GTA
Tyr
>WENV006796
AACY020179772
117806
Betaproteobacteria
GTA
Tyr
>WENV046584
AACY022609768
117806
Betaproteobacteria
GTA
Tyr
>WENV047216
AACY022647211
117806
Betaproteobacteria
GTA
Tyr
>WENV058926
AACY023347323
117806
Betaproteobacteria
GTA
Tyr
>WENV074552
AACY023982648
117806
Betaproteobacteria
GTA
Tyr
>WENV069739
AACY023781586
229245
Betaproteobacteria
GAT
Ile
>WENV029380
AACY021194085
111196
Betaproteobacteria
GTA
Tyr
>WENV029973
AACY021244984
483989
Betaproteobacteria
>WENV057634
AACY023300883
118123
Betaproteobacteria
CAG
Leu
>WENV057269
AACY023289898
20574
Betaproteobacteria
GGA
Ser
>WENV058188
AACY023320520
20574
Betaproteobacteria
GGA
Ser
>WENV058320
AACY023324703
282942
Betaproteobacteria
CCG
Arg
>WENV058687
AACY023338771
282942
Betaproteobacteria
CCG
Arg
>WENV012927
AACY020353421
281681
Betaproteobacteria
TTT
Lys
>WENV035890
AACY021733474
281681
Betaproteobacteria
TTT
Lys
>WENV035891
AACY021733474
281681
Betaproteobacteria
TTT
Lys
>WENV030079
AACY021254033
504008
Betaproteobacteria
GCA
Cys
>WENV016783
AACY020469821
46896
Betaproteobacteria
TAA
Leu
>WENV012769
AACY020348588
118271
Betaproteobacteria
TAA
Leu
>WENV000317
AACY020009488
286629
Betaproteobacteria
CCA
Trp
>WENV001728
AACY020049234
286629
Betaproteobacteria
CCA
Trp
>WENV001905
AACY020053799
286629
Betaproteobacteria
CCA
Trp
>WENV012288
AACY020335018
286629
Betaproteobacteria
CCA
Trp
>WENV016297
AACY020460390
286629
Betaproteobacteria
CCA
Trp
>WENV016750
AACY020469217
286629
Betaproteobacteria
CCA
Trp
>WENV046530
AACY022605986
286629
Betaproteobacteria
CCA
Trp
>WENV046752
AACY022621042
286629
Betaproteobacteria
CCA
Trp
>WENV046790
AACY022623043
286629
Betaproteobacteria
CCA
Trp
>WENV047134
AACY022641208
286629
Betaproteobacteria
CCA
Trp
>WENV057424
AACY023294433
286629
Betaproteobacteria
CCA
Trp
>WENV067069
AACY023674179
286629
Betaproteobacteria
CCA
Trp
>WENV053357
AACY023091451
89684
Betaproteobacteria
TAG
Leu
>WENV057743
AACY023305096
89684
Betaproteobacteria
TAG
Leu
>WENV061300
AACY023428695
89684
Betaproteobacteria
TAG
Leu
>WENV025398
AACY020885003
499230
Betaproteobacteria
TCC
Gly
>WENV031260
AACY021351668
499230
Betaproteobacteria
TCC
Gly
>WENV057472
AACY023295671
499230
Betaproteobacteria
TCC
Gly
>WENV016252
AACY020459264
499230
Betaproteobacteria
TCC
Gly
>WENV002040
AACY020057383
120253
Betaproteobacteria
CAG
Leu
>WENV057950
AACY023312409
120253
Betaproteobacteria
CAG
Leu
>WENV012704
AACY020346355
29751
Betaproteobacteria
CGA
Ser
>WENV032366
AACY021440295
284933
Betaproteobacteria
CCA
Trp
>WENV057390
AACY023293392
284933
Betaproteobacteria
CCA
Trp
>WENV058792
AACY023341912
284933
Betaproteobacteria
CCA
Trp
>WENV058497
AACY023331042
4045
Betaproteobacteria
GCT
Ser
>WENV058604
AACY023335191
4045
Betaproteobacteria
GCT
Ser
>WENV001902
AACY020053799
292271
Betaproteobacteria
TGT
Thr
>WENV056564
AACY023259512
292271
Betaproteobacteria
TGT
Thr
>WENV000009
AACY020000525
118799
Betaproteobacteria
GAG
Leu
>WENV001075
AACY020032631
118799
Betaproteobacteria
GAG
Leu
>WENV016544
AACY020465298
118799
Betaproteobacteria
GAG
Leu
>WENV016748
AACY020469184
118799
Betaproteobacteria
GAG
Leu
>WENV055096
AACY023210720
118799
Betaproteobacteria
GAG
Leu
>WENV055986
AACY023245586
118799
Betaproteobacteria
GAG
Leu
>WENV056579
AACY023260041
118799
Betaproteobacteria
GAG
Leu
>WENV058240
AACY023322175
118799
Betaproteobacteria
GAG
Leu
>WENV059042
AACY023352171
118799
Betaproteobacteria
GAG
Leu
>WENV061800
AACY023440877
118799
Betaproteobacteria
GAG
Leu
>WENV058697
AACY023338929
180114
Betaproteobacteria
CAT
Met
>WENV001840
AACY020052518
180114
Betaproteobacteria
CAT
Met
>WENV057669
AACY023302479
342564
Betaproteobacteria
CGC
Ala
>WENV058235
AACY023322059
342564
Betaproteobacteria
CGC
Ala
>WENV020247
AACY020551317
282823
Betaproteobacteria
CGT
Thr
>WENV052055
AACY023001651
282823
Betaproteobacteria
CGT
Thr
>WENV013188
AACY020362127
225043
Betaproteobacteria
ACG
Arg
>WENV013189
AACY020362127
225043
Betaproteobacteria
ACG
Arg
>WENV051720
AACY022975464
225043
Betaproteobacteria
ACG
Arg
>WENV058166
AACY023319864
225043
Betaproteobacteria
ACG
Arg
>WENV035288
AACY021684010
329025
Betaproteobacteria
TTT
Lys
>WENV020158
AACY020548404
26144
Betaproteobacteria
CGA
Ser
>WENV047205
AACY022646333
178499
Betaproteobacteria
TTG
Gln
>WENV000854
AACY020027228
229876
Betaproteobacteria
GGG
Pro
>WENV001802
AACY020051129
229876
Betaproteobacteria
GGG
Pro
>WENV006316
AACY020171540
229876
Betaproteobacteria
GGG
Pro
>WENV016596
AACY020466280
229876
Betaproteobacteria
GGG
Pro
>WENV016722
AACY020468842
229876
Betaproteobacteria
GGG
Pro
>WENV022935
AACY020684863
229876
Betaproteobacteria
GGG
Pro
>WENV027687
AACY021063685
229876
Betaproteobacteria
GGG
Pro
>WENV032458
AACY021449057
229876
Betaproteobacteria
GGG
Pro
>WENV044824
AACY022456947
229876
Betaproteobacteria
GGG
Pro
>WENV047002
AACY022633533
229876
Betaproteobacteria
GGG
Pro
>WENV057168
AACY023287194
229876
Betaproteobacteria
GGG
Pro
>WENV058086
AACY023317170
229876
Betaproteobacteria
GGG
Pro
>WENV012924
AACY020353234
400563
Betaproteobacteria
CCT
Arg
>WENV058461
AACY023330062
73885
Betaproteobacteria
CAG
Leu
>WENV058614
AACY023335614
73885
Betaproteobacteria
CAG
Leu
>WENV001587
AACY020045165
496730
Betaproteobacteria
GCA
Cys
>WENV061679
AACY023437260
504022
Betaproteobacteria
TCC
Gly
>WENV023936
AACY020766835
186768
Betaproteobacteria
>WENV023937
AACY020766835
186768
Betaproteobacteria
>WENV028776
AACY021144763
186768
Betaproteobacteria
>WENV036453
AACY021780743
186768
Betaproteobacteria
>WENV042807
AACY022266587
186768
Betaproteobacteria
>WENV042808
AACY022266587
186768
Betaproteobacteria
>WENV046588
AACY022609812
186768
Betaproteobacteria
>WENV046589
AACY022609812
186768
Betaproteobacteria
>WENV076383
AACY024096157
186768
Betaproteobacteria
>WENV076384
AACY024096157
186768
Betaproteobacteria
>WENV000656
AACY020020022
186768
Betaproteobacteria
>WENV000657
AACY020020022
186768
Betaproteobacteria
>WENV001894
AACY020053671
186768
Betaproteobacteria
>WENV001895
AACY020053671
186768
Betaproteobacteria
>WENV006020
AACY020166872
186768
Betaproteobacteria
>WENV006021
AACY020166872
186768
Betaproteobacteria
>WENV058417
AACY023328575
118529
Betaproteobacteria
CAA
Leu
>WENV003064
AACY020083607
299618
Betaproteobacteria
CGT
Thr
>WENV045261
AACY022500419
29932
Betaproteobacteria
TGA
Ser
>WENV057840
AACY023308391
29932
Betaproteobacteria
TGA
Ser
>WENV058373
AACY023326812
29932
Betaproteobacteria
TGA
Ser
>WENV058510
AACY023331552
29932
Betaproteobacteria
TGA
Ser
>WENV058712
AACY023339291
29932
Betaproteobacteria
TGA
Ser
>WENV058940
AACY023347737
29932
Betaproteobacteria
TGA
Ser
>WENV074509
AACY023980128
29932
Betaproteobacteria
TGA
Ser
>WENV006655
AACY020177882
355697
Betaproteobacteria
GCC
Gly
>WENV006862
AACY020180669
355697
Betaproteobacteria
GCC
Gly
>WENV018960
AACY020523219
409406
Betaproteobacteria
GGT
Thr
>WENV018966
AACY020523432
409406
Betaproteobacteria
GGT
Thr
>WENV019162
AACY020526831
409406
Betaproteobacteria
GGT
Thr
>WENV019492
AACY020533245
409406
Betaproteobacteria
GGT
Thr
>WENV050835
AACY022907794
409406
Betaproteobacteria
GGT
Thr
>WENV036259
AACY021762599
282943
Betaproteobacteria
CTT
Lys
>WENV012970
AACY020355094
283018
Betaproteobacteria
TTT
Lys
>WENV016789
AACY020469994
235235
Betaproteobacteria
>WENV058274
AACY023323192
235235
Betaproteobacteria
>WENV058843
AACY023344181
235235
Betaproteobacteria
>WENV058871
AACY023345230
235235
Betaproteobacteria
>WENV016919
AACY020472296
118528
Betaproteobacteria
GTA
Tyr
>WENV030893
AACY021320202
193851
Betaproteobacteria
TTG
Gln
>WENV026988
AACY021010455
193851
Betaproteobacteria
TTG
Gln
>WENV031138
AACY021343299
193851
Betaproteobacteria
TTG
Gln
>WENV031568
AACY021378046
193851
Betaproteobacteria
TTG
Gln
>WENV002287
AACY020064250
340615
Betaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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