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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181226111
OFDK01000053
241626
Bacillota
CTC
Glu
>WENV181226050
OFDK01000009
341849
Bacillota
TTC
Glu
>WENV181226159
OFDK01000118
341849
Bacillota
TTC
Glu
>WENV181226171
OFDK01000147
242780
Bacillota
GGG
Pro
>WENV181226081
OFDK01000020
238816
Bacillota
GAA
Phe
>WENV181226183
OFDK01000184
238816
Bacillota
GAA
Phe
>WENV181226162
OFDK01000126
353424
Bacillota
GTT
Asn
>WENV181226047
OFDK01000009
24190
Bacillota
TAA
Leu
>WENV181226093
OFDK01000031
241609
Bacillota
CTT
Lys
>WENV181226090
OFDK01000031
150658
Bacillota
TGG
Pro
>WENV181226273
OFDK01000516
342590
Bacillota
CGT
Thr
>WENV181226181
OFDK01000184
241566
Bacillota
TAC
Val
>WENV181226125
OFDK01000062
151761
Bacillota
TCG
Arg
>WENV181226024
OFDK01000001
241632
Bacillota
TTG
Gln
>WENV181226117
OFDK01000061
258968
Bacillota
CCA
Trp
>WENV181226071
OFDK01000015
151689
Bacillota
CCT
Arg
>WENV181226142
OFDK01000094
151689
Bacillota
CCT
Arg
>WENV181226141
OFDK01000090
7745
Bacillota
CGA
Ser
>WENV181226023
OFDK01000001
150673
Bacillota
GTG
His
>WENV181226049
OFDK01000009
151717
Bacillota
CAT
Met
>WENV181226059
OFDK01000011
123355
Bacillota
GGG
Pro
>WENV181226095
OFDK01000036
123355
Bacillota
GGG
Pro
>WENV181226080
OFDK01000020
150676
Bacillota
GTC
Asp
>WENV181226075
OFDK01000019
24334
Bacillota
TAA
Leu
>WENV181226184
OFDK01000184
353391
Bacillota
GCC
Gly
>WENV181226074
OFDK01000018
341837
Bacillota
CGT
Thr
>WENV181226115
OFDK01000056
341837
Bacillota
CGT
Thr
>WENV181226116
OFDK01000058
342588
Bacillota
CGG
Pro
>WENV181226043
OFDK01000008
148104
Bacillota
CAT
Met
>WENV181226244
OFDK01000374
148104
Bacillota
CAT
Met
>WENV181226285
OFDK01000752
148104
Bacillota
CAT
Met
>WENV181226154
OFDK01000115
145606
Bacillota
GTC
Asp
>WENV181226235
OFDK01000337
145606
Bacillota
GTC
Asp
>WENV181226193
OFDK01000195
151759
Bacillota
>WENV181226134
OFDK01000081
240404
Bacillota
TAC
Val
>WENV181226196
OFDK01000195
240404
Bacillota
TAC
Val
>WENV181226099
OFDK01000036
96692
Bacillota
TAG
Leu
>WENV181226262
OFDK01000420
4768
Bacillota
GGA
Ser
>WENV181226082
OFDK01000020
241622
Bacillota
GCC
Gly
>WENV181226051
OFDK01000009
59985
Bacillota
CAG
Leu
>WENV181226292
OFDK01002238
242781
Bacillota
TGT
Thr
>WENV181226054
OFDK01000010
151687
Bacillota
ACG
Arg
>WENV181226083
OFDK01000020
341860
Bacillota
GCA
Cys
>WENV181226228
OFDK01000268
341939
Bacillota
CCC
Gly
>WENV181226198
OFDK01000195
242777
Bacillota
GAA
Phe
>WENV181226089
OFDK01000030
255013
Bacillota
GGT
Thr
>WENV181226250
OFDK01000377
255013
Bacillota
GGT
Thr
>WENV181226057
OFDK01000010
242732
Bacillota
CAT
Met
>WENV181226145
OFDK01000095
158241
Bacillota
GTC
Asp
>WENV181226210
OFDK01000214
240414
Bacillota
GGC
Ala
>WENV181226066
OFDK01000012
162254
Bacillota
ACG
Arg
>WENV181226084
OFDK01000021
24335
Bacillota
TGA
Ser
>WENV181226079
OFDK01000020
241567
Bacillota
TAC
Val
>WENV181226101
OFDK01000046
235637
Bacillota
TAC
Val
>WENV181226153
OFDK01000115
235637
Bacillota
TAC
Val
>WENV181226261
OFDK01000420
16775
Bacillota
CGA
Ser
>WENV181226096
OFDK01000036
10855
Bacillota
TGA
Ser
>WENV181226085
OFDK01000021
4767
Bacillota
GCT
Ser
>WENV181226048
OFDK01000009
236044
Bacillota
CAT
Met
>WENV181226107
OFDK01000048
236044
Bacillota
CAT
Met
>WENV181226197
OFDK01000195
151760
Bacillota
GTC
Asp
>WENV181226025
OFDK01000001
241608
Bacillota
TTT
Lys
>WENV181226158
OFDK01000118
241608
Bacillota
TTT
Lys
>WENV181226259
OFDK01000393
241608
Bacillota
TTT
Lys
>WENV181226163
OFDK01000126
242775
Bacillota
CAT
Met
>WENV181226149
OFDK01000109
413478
Bacillota
CTG
Gln
>WENV181226052
OFDK01000010
242696
Bacillota
TCG
Arg
>WENV181226070
OFDK01000013
242696
Bacillota
TCG
Arg
>WENV181226091
OFDK01000031
96685
Bacillota
GTA
Tyr
>WENV181226121
OFDK01000062
345314
Bacillota
TTG
Gln
>WENV181226077
OFDK01000019
166508
Bacillota
CAT
Met
>WENV181226133
OFDK01000081
242773
Bacillota
TGG
Pro
>WENV181226072
OFDK01000016
242774
Bacillota
CCG
Arg
>WENV181226053
OFDK01000010
45598
Bacillota
GAG
Leu
>WENV181226042
OFDK01000008
353527
Bacillota
TTC
Glu
>WENV181226143
OFDK01000095
353527
Bacillota
TTC
Glu
>WENV181226284
OFDK01000669
353527
Bacillota
TTC
Glu
>WENV181226289
OFDK01000950
353527
Bacillota
TTC
Glu
>WENV181226150
OFDK01000109
242779
Bacillota
CTC
Glu
>WENV181226060
OFDK01000012
238834
Bacillota
TTT
Lys
>WENV181226202
OFDK01000201
37525
Bacillota
CAA
Leu
>WENV181226270
OFDK01000486
37525
Bacillota
CAA
Leu
>WENV181226058
OFDK01000011
150641
Bacillota
>WENV181226172
OFDK01000160
150641
Bacillota
>WENV181226281
OFDK01000590
150641
Bacillota
>WENV181226267
OFDK01000462
151762
Bacillota
CCT
Arg
>WENV181226123
OFDK01000062
60203
Bacillota
CAG
Leu
>WENV181226245
OFDK01000374
242686
Bacillota
TGC
Ala
>WENV181226275
OFDK01000551
242686
Bacillota
TGC
Ala
>WENV181226286
OFDK01000752
242686
Bacillota
TGC
Ala
>WENV181226135
OFDK01000081
81576
Bacillota
GTA
Tyr
>WENV181226268
OFDK01000480
81576
Bacillota
GTA
Tyr
>WENV181226098
OFDK01000036
241585
Bacillota
GGT
Thr
>WENV181226161
OFDK01000122
7112
Bacillota
GGA
Ser
>WENV181226110
OFDK01000053
413202
Bacillota
CTG
Gln
>WENV181226122
OFDK01000062
240413
Bacillota
TTT
Lys
>WENV181226269
OFDK01000480
240413
Bacillota
TTT
Lys
>WENV181226164
OFDK01000134
10856
Bacillota
GCT
Ser
>WENV181226177
OFDK01000173
10856
Bacillota
GCT
Ser
>WENV181226195
OFDK01000195
176009
Bacillota
CAC
Val
>WENV181226208
OFDK01000207
342589
Bacillota
TTC
Glu
>WENV181226276
OFDK01000551
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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