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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170972937
MTKY01005307
210458
Alphaproteobacteria
CGG
Pro
>WENV170972940
MTKY01005314
176153
Alphaproteobacteria
CAT
Met
>WENV170972980
MTKY01007242
400695
Alphaproteobacteria
TTC
Glu
>WENV170973013
MTKY01008179
404744
Alphaproteobacteria
GCC
Gly
>WENV170973076
MTKY01011605
400223
Alphaproteobacteria
GGT
Thr
>WENV170973107
MTKY01012559
289463
Alphaproteobacteria
CAT
Met
>WENV170973218
MTKY01020352
282871
Alphaproteobacteria
GAA
Phe
>WENV170973257
MTKY01022708
29598
Alphaproteobacteria
GGA
Ser
>WENV170973327
MTKY01028058
119321
Alphaproteobacteria
GTA
Tyr
>WENV170973339
MTKY01028978
404592
Alphaproteobacteria
GGT
Thr
>WENV170973368
MTKY01032892
177988
Alphaproteobacteria
ACG
Arg
>WENV170973373
MTKY01033798
282660
Alphaproteobacteria
CGC
Ala
>WENV170973403
MTKY01036158
282966
Alphaproteobacteria
TTT
Lys
>WENV170973411
MTKY01037443
29655
Alphaproteobacteria
TGA
Ser
>WENV170973453
MTKY01041836
480392
Alphaproteobacteria
GCA
Cys
>WENV170973481
MTKY01045148
398999
Alphaproteobacteria
GGT
Thr
>WENV170973545
MTKY01047279
400216
Alphaproteobacteria
TTG
Gln
>WENV170973558
MTKY01047508
179891
Alphaproteobacteria
GTG
His
>WENV170973634
MTKY01049147
398981
Alphaproteobacteria
GTT
Asn
>WENV170973945
MTKY01051981
118150
Alphaproteobacteria
TAG
Leu
>WENV170973998
MTKY01052731
282663
Alphaproteobacteria
CAT
Met
>WENV170974024
MTKY01052995
398994
Alphaproteobacteria
GTT
Asn
>WENV170974059
MTKY01053424
100353
Alphaproteobacteria
GTA
Tyr
>WENV170974105
MTKY01054152
480412
Alphaproteobacteria
GCA
Cys
>WENV170974130
MTKY01054443
409749
Alphaproteobacteria
>WENV170974178
MTKY01055024
77714
Alphaproteobacteria
CAG
Leu
>WENV170974226
MTKY01055930
195764
Alphaproteobacteria
ACG
Arg
>WENV170974229
MTKY01055974
399001
Alphaproteobacteria
GAC
Val
>WENV170974328
MTKY01057837
428327
Alphaproteobacteria
GCC
Gly
>WENV170974343
MTKY01058296
176490
Alphaproteobacteria
CAT
Met
>WENV170974355
MTKY01058566
122480
Alphaproteobacteria
CAG
Leu
>WENV170974363
MTKY01058778
183975
Alphaproteobacteria
GTC
Asp
>WENV170974414
MTKY01060625
192247
Alphaproteobacteria
GTG
His
>WENV170974423
MTKY01060952
158526
Alphaproteobacteria
GGG
Pro
>WENV170974431
MTKY01061023
282960
Alphaproteobacteria
CCA
Trp
>WENV170974438
MTKY01061258
400695
Alphaproteobacteria
TTC
Glu
>WENV170974449
MTKY01061867
289463
Alphaproteobacteria
CAT
Met
>WENV170974452
MTKY01061985
319539
Alphaproteobacteria
GGC
Ala
>WENV170974458
MTKY01062553
399001
Alphaproteobacteria
GAC
Val
>WENV170974465
MTKY01062835
400069
Alphaproteobacteria
CAC
Val
>WENV170974506
MTKY01063861
192247
Alphaproteobacteria
GTG
His
>WENV170974596
MTKY01066557
400069
Alphaproteobacteria
CAC
Val
>WENV170974676
MTKY01071447
282748
Alphaproteobacteria
CGT
Thr
>WENV170974721
MTKY01072403
284697
Alphaproteobacteria
GAA
Phe
>WENV170974770
MTKY01073692
283601
Alphaproteobacteria
CGT
Thr
>WENV170974815
MTKY01075982
282658
Alphaproteobacteria
CGT
Thr
>WENV170974831
MTKY01076833
406705
Alphaproteobacteria
GAC
Val
>WENV170974844
MTKY01077174
156124
Alphaproteobacteria
GGG
Pro
>WENV170974865
MTKY01078404
290520
Alphaproteobacteria
TAC
Val
>WENV170974877
MTKY01079134
180026
Alphaproteobacteria
CCT
Arg
>WENV170974878
MTKY01079185
400223
Alphaproteobacteria
GGT
Thr
>WENV170974882
MTKY01079542
399001
Alphaproteobacteria
GAC
Val
>WENV170974886
MTKY01079729
402731
Alphaproteobacteria
TTG
Gln
>WENV170974905
MTKY01080809
401165
Alphaproteobacteria
CAC
Val
>WENV170974936
MTKY01081483
178315
Alphaproteobacteria
CAT
Met
>WENV170974945
MTKY01081665
22052
Alphaproteobacteria
GGA
Ser
>WENV170974950
MTKY01082434
400069
Alphaproteobacteria
CAC
Val
>WENV170974951
MTKY01082434
301916
Alphaproteobacteria
TAC
Val
>WENV170974977
MTKY01083389
178239
Alphaproteobacteria
TAC
Val
>WENV170975007
MTKY01085218
400216
Alphaproteobacteria
TTG
Gln
>WENV170975029
MTKY01086604
398994
Alphaproteobacteria
GTT
Asn
>WENV170975042
MTKY01088295
73440
Alphaproteobacteria
CAG
Leu
>WENV170975074
MTKY01090226
122480
Alphaproteobacteria
CAG
Leu
>WENV170975151
MTKY01094387
415537
Alphaproteobacteria
>WENV170975248
MTKY01099197
281676
Alphaproteobacteria
TAC
Val
>WENV170975252
MTKY01099255
404641
Alphaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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